RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 CDH20Q9HBT6 801 aa8.95□□□□□ -0.98
TRAFD1-208ENST00000552890 POLE4Q9NR33 117 aa8.95□□□□□ -0.98
TRAFD1-208ENST00000552890 ATP23Q9Y6H3 246 aa8.95□□□□□ -0.98
TRAFD1-208ENST00000552890 ROS1P08922 2347 aa8.94□□□□□ -0.98
TRAFD1-208ENST00000552890 SNTNA6NMZ2 147 aa8.94□□□□□ -0.98
TRAFD1-208ENST00000552890 B9A039 149 aa8.94□□□□□ -0.98
TRAFD1-208ENST00000552890 SMPD2O60906 423 aa8.94□□□□□ -0.98
TRAFD1-208ENST00000552890 HLA-HP01893 362 aa8.94□□□□□ -0.98
TRAFD1-208ENST00000552890 HLA-DQA2P01906 255 aa8.94□□□□□ -0.98
TRAFD1-208ENST00000552890 PRF1P14222 555 aa8.94□□□□□ -0.98
TRAFD1-208ENST00000552890 HIST1H1CP16403 213 aaKnown RBP8.94□□□□□ -0.98
TRAFD1-208ENST00000552890 POU1F1P28069 291 aa8.94□□□□□ -0.98
TRAFD1-208ENST00000552890 GDI2P50395 445 aaKnown RBP8.94□□□□□ -0.98
TRAFD1-208ENST00000552890 IDH3GP51553 393 aaPredicted RBP8.94□□□□□ -0.98
TRAFD1-208ENST00000552890 LSM11P83369 360 aaKnown RBP eCLIP8.94□□□□□ -0.98
TRAFD1-208ENST00000552890 RUNX1T1Q06455 604 aa8.94□□□□□ -0.98
TRAFD1-208ENST00000552890 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.94□□□□□ -0.98
TRAFD1-208ENST00000552890 NPRL3Q12980 569 aa8.94□□□□□ -0.98
TRAFD1-208ENST00000552890 DAG1Q14118 895 aa8.94□□□□□ -0.98
TRAFD1-208ENST00000552890 KPNB1Q14974 876 aaKnown RBP8.94□□□□□ -0.98
TRAFD1-208ENST00000552890 PGGHGQ32M88 737 aa8.94□□□□□ -0.98
TRAFD1-208ENST00000552890 MESTQ5EB52 335 aa8.94□□□□□ -0.98
TRAFD1-208ENST00000552890 SLC35D3Q5M8T2 416 aa8.94□□□□□ -0.98
TRAFD1-208ENST00000552890 CLEC12AQ5QGZ9 265 aa8.94□□□□□ -0.98
TRAFD1-208ENST00000552890 SHEQ5VZ18 495 aa8.94□□□□□ -0.98
TRAFD1-208ENST00000552890 PRSS57Q6UWY2 283 aa8.94□□□□□ -0.98
TRAFD1-208ENST00000552890 THSD4Q6ZMP0 1018 aa8.94□□□□□ -0.98
TRAFD1-208ENST00000552890 RHOUQ7L0Q8 258 aa8.94□□□□□ -0.98
TRAFD1-208ENST00000552890 ZBTB46Q86UZ6 589 aa8.94□□□□□ -0.98
TRAFD1-208ENST00000552890 SKA3Q8IX90 412 aa8.94□□□□□ -0.98
TRAFD1-208ENST00000552890 SLC30A7Q8NEW0 376 aa8.94□□□□□ -0.98
TRAFD1-208ENST00000552890 PROKR2Q8NFJ6 384 aa8.94□□□□□ -0.98
TRAFD1-208ENST00000552890 OR52E2Q8NGJ4 325 aa8.94□□□□□ -0.98
TRAFD1-208ENST00000552890 OR5L1Q8NGL2 311 aa8.94□□□□□ -0.98
TRAFD1-208ENST00000552890 OR4K13Q8NH42 304 aa8.94□□□□□ -0.98
TRAFD1-208ENST00000552890 NSMAFQ92636 917 aa8.94□□□□□ -0.98
TRAFD1-208ENST00000552890 ITFG2Q969R8 447 aa8.94□□□□□ -0.98
TRAFD1-208ENST00000552890 SLCO4A1Q96BD0 722 aa8.94□□□□□ -0.98
TRAFD1-208ENST00000552890 RASD2Q96D21 266 aa8.94□□□□□ -0.98
TRAFD1-208ENST00000552890 GPA33Q99795 319 aa8.94□□□□□ -0.98
TRAFD1-208ENST00000552890 NUAK2Q9H093 628 aa8.94□□□□□ -0.98
TRAFD1-208ENST00000552890 HDHD2Q9H0R4 259 aa8.94□□□□□ -0.98
TRAFD1-208ENST00000552890 GABARAPL1Q9H0R8 117 aa8.94□□□□□ -0.98
TRAFD1-208ENST00000552890 VCXQ9H320 206 aa8.94□□□□□ -0.98
TRAFD1-208ENST00000552890 FN3KQ9H479 309 aa8.94□□□□□ -0.98
TRAFD1-208ENST00000552890 H2AFY2Q9P0M6 372 aaPredicted RBP8.94□□□□□ -0.98
TRAFD1-208ENST00000552890 CMAHPQ9Y471 501 aa8.94□□□□□ -0.98
TRAFD1-208ENST00000552890 PLCE1Q9P212 2302 aa8.93□□□□□ -0.98
TRAFD1-208ENST00000552890 CCDC168Q8NDH2 2452 aa8.93□□□□□ -0.98
TRAFD1-208ENST00000552890 TACC2O95359 2948 aa8.93□□□□□ -0.98
TRAFD1-208ENST00000552890 IGHV1-18A0A0C4DH31 117 aa8.93□□□□□ -0.98
TRAFD1-208ENST00000552890 OR6C6A6NF89 314 aa8.93□□□□□ -0.98
TRAFD1-208ENST00000552890 PRR23D1E9PI22 279 aaPredicted RBP8.93□□□□□ -0.98
TRAFD1-208ENST00000552890 PRODHO43272 600 aa8.93□□□□□ -0.98
TRAFD1-208ENST00000552890 SLC2A10O95528 541 aa8.93□□□□□ -0.98
TRAFD1-208ENST00000552890 CECR9P0C854 216 aa8.93□□□□□ -0.98
TRAFD1-208ENST00000552890 PRR23D2P0DMB1 279 aaPredicted RBP8.93□□□□□ -0.98
TRAFD1-208ENST00000552890 PAX1P15863 534 aa8.93□□□□□ -0.98
TRAFD1-208ENST00000552890 ZNF14P17017 642 aaPredicted RBP8.93□□□□□ -0.98
TRAFD1-208ENST00000552890 IGFBP5P24593 272 aa8.93□□□□□ -0.98
TRAFD1-208ENST00000552890 STOMP27105 288 aa8.93□□□□□ -0.98
TRAFD1-208ENST00000552890 GLRXP35754 106 aa8.93□□□□□ -0.98
TRAFD1-208ENST00000552890 LIPAP38571 399 aa8.93□□□□□ -0.98
TRAFD1-208ENST00000552890 SLC15A1P46059 708 aa8.93□□□□□ -0.98
TRAFD1-208ENST00000552890 FABP6P51161 128 aa8.93□□□□□ -0.98
TRAFD1-208ENST00000552890 NUDT6P53370 316 aa8.93□□□□□ -0.98
TRAFD1-208ENST00000552890 CRISP1P54107 249 aa8.93□□□□□ -0.98
TRAFD1-208ENST00000552890 FOXG1P55316 489 aaPredicted RBP8.93□□□□□ -0.98
TRAFD1-208ENST00000552890 CDC42P60953 191 aa8.93□□□□□ -0.98
TRAFD1-208ENST00000552890 SNRPD2P62316 118 aaKnown RBP8.93□□□□□ -0.98
TRAFD1-208ENST00000552890 PHYHD1Q5SRE7 291 aa8.93□□□□□ -0.98
TRAFD1-208ENST00000552890 LCN1P1Q5VSP4 162 aa8.93□□□□□ -0.98
TRAFD1-208ENST00000552890 KDM4DQ6B0I6 523 aa8.93□□□□□ -0.98
TRAFD1-208ENST00000552890 HIST2H2BCQ6DN03 193 aa8.93□□□□□ -0.98
TRAFD1-208ENST00000552890 SHFQ7M4L6 423 aa8.93□□□□□ -0.98
TRAFD1-208ENST00000552890 DTX2Q86UW9 622 aa8.93□□□□□ -0.98
TRAFD1-208ENST00000552890 MUC15Q8N387 334 aa8.93□□□□□ -0.98
TRAFD1-208ENST00000552890 LRRC18Q8N456 261 aa8.93□□□□□ -0.98
TRAFD1-208ENST00000552890 NPEPL1Q8NDH3 523 aa8.93□□□□□ -0.98
TRAFD1-208ENST00000552890 TRUB1Q8WWH5 349 aaKnown RBP8.93□□□□□ -0.98
TRAFD1-208ENST00000552890 C11orf40Q8WZ69 217 aa8.93□□□□□ -0.98
TRAFD1-208ENST00000552890 ZNF837Q96EG3 531 aaPredicted RBP8.93□□□□□ -0.98
TRAFD1-208ENST00000552890 RDH12Q96NR8 316 aa8.93□□□□□ -0.98
TRAFD1-208ENST00000552890 NMNAT3Q96T66 252 aa8.93□□□□□ -0.98
TRAFD1-208ENST00000552890 RERGLQ9H628 205 aa8.93□□□□□ -0.98
TRAFD1-208ENST00000552890 EGLN3Q9H6Z9 239 aa8.93□□□□□ -0.98
TRAFD1-208ENST00000552890 SLC25A19Q9HC21 320 aa8.93□□□□□ -0.98
TRAFD1-208ENST00000552890 RPRD1BQ9NQG5 326 aaKnown RBP8.93□□□□□ -0.98
TRAFD1-208ENST00000552890 CBLN4Q9NTU7 201 aa8.93□□□□□ -0.98
TRAFD1-208ENST00000552890 SLCO1C1Q9NYB5 712 aa8.93□□□□□ -0.98
TRAFD1-208ENST00000552890 NPAP1Q9NZP6 1156 aa8.93□□□□□ -0.98
TRAFD1-208ENST00000552890 CGGBP1Q9UFW8 167 aaPredicted RBP8.93□□□□□ -0.98
TRAFD1-208ENST00000552890 IL20RAQ9UHF4 553 aa8.93□□□□□ -0.98
TRAFD1-208ENST00000552890 B9D1Q9UPM9 204 aa8.93□□□□□ -0.98
TRAFD1-208ENST00000552890 UGT2A1Q9Y4X1 527 aa8.93□□□□□ -0.98
TRAFD1-208ENST00000552890 CADP27708 2225 aa8.93□□□□□ -0.98
TRAFD1-208ENST00000552890 AKAP6Q13023 2319 aa8.92□□□□□ -0.98
TRAFD1-208ENST00000552890 IGHV2OR16-5A0A0B4J2B6 119 aa8.92□□□□□ -0.98
TRAFD1-208ENST00000552890 SHISA9B4DS77 424 aa8.92□□□□□ -0.98
TRAFD1-208ENST00000552890 SGCEO43556 437 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms