RNA–Protein interactions for RNA: ENST00000552162.5

RAB5C-209, Transcript of RAB5C, member RAS oncogene family, human

TSL 4

Gene RAB5C, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB5C-209	ENST00000552162	SEPHS2	Q99611	448 aa		13.76	□□□□□ -0.21
RAB5C-209	ENST00000552162	MRPL13	Q9BYD1	178 aa	Known RBP	13.76	□□□□□ -0.21
RAB5C-209	ENST00000552162	SIAE	Q9HAT2	523 aa		13.76	□□□□□ -0.21
RAB5C-209	ENST00000552162	PATZ1	Q9HBE1	687 aa	Known RBP	13.76	□□□□□ -0.21
RAB5C-209	ENST00000552162	MSL2	Q9HCI7	577 aa		13.76	□□□□□ -0.21
RAB5C-209	ENST00000552162	TMEM106B	Q9NUM4	274 aa		13.76	□□□□□ -0.21
RAB5C-209	ENST00000552162	SLC7A7	Q9UM01	511 aa		13.76	□□□□□ -0.21
RAB5C-209	ENST00000552162	CORO2B	Q9UQ03	480 aa		13.76	□□□□□ -0.21
RAB5C-209	ENST00000552162	ANGPT4	Q9Y264	503 aa		13.76	□□□□□ -0.21
RAB5C-209	ENST00000552162	GMEB1	Q9Y692	573 aa		13.76	□□□□□ -0.21
RAB5C-209	ENST00000552162	TRBV5-3	A0A0A0MS03	114 aa		13.75	□□□□□ -0.21
RAB5C-209	ENST00000552162		A0A1W2PRG6	482 aa		13.75	□□□□□ -0.21
RAB5C-209	ENST00000552162	CENPBD1	B2RD01	187 aa		13.75	□□□□□ -0.21
RAB5C-209	ENST00000552162	BLOC1S5-TXNDC5	H3BN57	136 aa		13.75	□□□□□ -0.21
RAB5C-209	ENST00000552162	LYPD3	O95274	346 aa		13.75	□□□□□ -0.21
RAB5C-209	ENST00000552162	SLC2A10	O95528	541 aa		13.75	□□□□□ -0.21
RAB5C-209	ENST00000552162	OPN1SW	P03999	348 aa		13.75	□□□□□ -0.21
RAB5C-209	ENST00000552162	F13B	P05160	661 aa		13.75	□□□□□ -0.21
RAB5C-209	ENST00000552162	GPX2	P18283	190 aa		13.75	□□□□□ -0.21
RAB5C-209	ENST00000552162	SLC6A9	P48067	706 aa		13.75	□□□□□ -0.21
RAB5C-209	ENST00000552162	GDI2	P50395	445 aa	Known RBP	13.75	□□□□□ -0.21
RAB5C-209	ENST00000552162	PPP1CB	P62140	327 aa		13.75	□□□□□ -0.21
RAB5C-209	ENST00000552162	TNFAIP6	P98066	277 aa	Predicted RBP	13.75	□□□□□ -0.21
RAB5C-209	ENST00000552162	TMEM155	Q4W5P6	130 aa		13.75	□□□□□ -0.21
RAB5C-209	ENST00000552162	PAGE3	Q5JUK9	113 aa		13.75	□□□□□ -0.21
RAB5C-209	ENST00000552162	HDDC2	Q7Z4H3	204 aa		13.75	□□□□□ -0.21
RAB5C-209	ENST00000552162	AKR7L	Q8NHP1	331 aa		13.75	□□□□□ -0.21
RAB5C-209	ENST00000552162	ADAMTS16	Q8TE57	1224 aa		13.75	□□□□□ -0.21
RAB5C-209	ENST00000552162	ASB10	Q8WXI3	467 aa		13.75	□□□□□ -0.21
RAB5C-209	ENST00000552162	NABP1	Q96AH0	204 aa		13.75	□□□□□ -0.21
RAB5C-209	ENST00000552162	TMIGD2	Q96BF3	282 aa		13.75	□□□□□ -0.21
RAB5C-209	ENST00000552162	SLC19A3	Q9BZV2	496 aa		13.75	□□□□□ -0.21
RAB5C-209	ENST00000552162	KLHL21	Q9UJP4	597 aa		13.75	□□□□□ -0.21
RAB5C-209	ENST00000552162	UGT2A1	Q9Y4X1	527 aa		13.75	□□□□□ -0.21
RAB5C-209	ENST00000552162	IGHV3OR16-10	A0A075B7F0	116 aa		13.74	□□□□□ -0.21
RAB5C-209	ENST00000552162		H3BSA7	217 aa		13.74	□□□□□ -0.21
RAB5C-209	ENST00000552162	TRMU	O75648	421 aa	Known RBP	13.74	□□□□□ -0.21
RAB5C-209	ENST00000552162	IGHV4-38-2	P0DP08	117 aa		13.74	□□□□□ -0.21
RAB5C-209	ENST00000552162	ACADS	P16219	412 aa		13.74	□□□□□ -0.21
RAB5C-209	ENST00000552162	OMG	P23515	440 aa		13.74	□□□□□ -0.21
RAB5C-209	ENST00000552162	MTNR1A	P48039	350 aa		13.74	□□□□□ -0.21
RAB5C-209	ENST00000552162	MRPL19	P49406	292 aa	Known RBP	13.74	□□□□□ -0.21
RAB5C-209	ENST00000552162	ZNF133	P52736	654 aa	Predicted RBP	13.74	□□□□□ -0.21
RAB5C-209	ENST00000552162	PCBP3	P57721	371 aa	Known RBP	13.74	□□□□□ -0.21
RAB5C-209	ENST00000552162	BTG1	P62324	171 aa		13.74	□□□□□ -0.21
RAB5C-209	ENST00000552162	ERVK-25	P63136	954 aa		13.74	□□□□□ -0.21
RAB5C-209	ENST00000552162	PSG4	Q00888	419 aa		13.74	□□□□□ -0.21
RAB5C-209	ENST00000552162	RPL18	Q07020	188 aa	Known RBP	13.74	□□□□□ -0.21
RAB5C-209	ENST00000552162	OCLN	Q16625	522 aa		13.74	□□□□□ -0.21
RAB5C-209	ENST00000552162	DUSP7	Q16829	419 aa		13.74	□□□□□ -0.21
RAB5C-209	ENST00000552162	WDR93	Q6P2C0	686 aa		13.74	□□□□□ -0.21
RAB5C-209	ENST00000552162	BLOC1S3	Q6QNY0	202 aa		13.74	□□□□□ -0.21
RAB5C-209	ENST00000552162	SPATC1	Q76KD6	591 aa		13.74	□□□□□ -0.21
RAB5C-209	ENST00000552162	FUNDC1	Q8IVP5	155 aa		13.74	□□□□□ -0.21
RAB5C-209	ENST00000552162	C1orf174	Q8IYL3	243 aa		13.74	□□□□□ -0.21
RAB5C-209	ENST00000552162	PARP8	Q8N3A8	854 aa		13.74	□□□□□ -0.21
RAB5C-209	ENST00000552162	GPR32P1	Q8NGA4	272 aa		13.74	□□□□□ -0.21
RAB5C-209	ENST00000552162	OR52E2	Q8NGJ4	325 aa		13.74	□□□□□ -0.21
RAB5C-209	ENST00000552162	VANGL1	Q8TAA9	524 aa	Predicted RBP	13.74	□□□□□ -0.21
RAB5C-209	ENST00000552162	SPDL1	Q96EA4	605 aa		13.74	□□□□□ -0.21
RAB5C-209	ENST00000552162	ZNF426	Q9BUY5	554 aa		13.74	□□□□□ -0.21
RAB5C-209	ENST00000552162	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	13.74	□□□□□ -0.21
RAB5C-209	ENST00000552162	OR5V1	Q9UGF6	321 aa		13.74	□□□□□ -0.21
RAB5C-209	ENST00000552162	TMEM120B	A0PK00	339 aa		13.73	□□□□□ -0.21
RAB5C-209	ENST00000552162	TRAPPC13	A5PLN9	417 aa		13.73	□□□□□ -0.21
RAB5C-209	ENST00000552162	EVPLL	A8MZ36	301 aa		13.73	□□□□□ -0.21
RAB5C-209	ENST00000552162		F5H0A9	414 aa	Predicted RBP	13.73	□□□□□ -0.21
RAB5C-209	ENST00000552162	TIMM8A	O60220	97 aa	Predicted RBP	13.73	□□□□□ -0.21
RAB5C-209	ENST00000552162	ICMT	O60725	284 aa		13.73	□□□□□ -0.21
RAB5C-209	ENST00000552162	GPANK1	O95872	356 aa		13.73	□□□□□ -0.21
RAB5C-209	ENST00000552162	NGF	P01138	241 aa		13.73	□□□□□ -0.21
RAB5C-209	ENST00000552162	PCGF2	P35227	344 aa		13.73	□□□□□ -0.21
RAB5C-209	ENST00000552162	DAP3	P51398	398 aa	Known RBP	13.73	□□□□□ -0.21
RAB5C-209	ENST00000552162	UGT2B15	P54855	530 aa		13.73	□□□□□ -0.21
RAB5C-209	ENST00000552162	FMOD	Q06828	376 aa		13.73	□□□□□ -0.21
RAB5C-209	ENST00000552162	ZMYND11	Q15326	602 aa		13.73	□□□□□ -0.21
RAB5C-209	ENST00000552162	SGCA	Q16586	387 aa		13.73	□□□□□ -0.21
RAB5C-209	ENST00000552162	ESCO2	Q56NI9	601 aa		13.73	□□□□□ -0.21
RAB5C-209	ENST00000552162	MTX3	Q5HYI7	312 aa		13.73	□□□□□ -0.21
RAB5C-209	ENST00000552162	C9orf139	Q6ZV77	190 aa		13.73	□□□□□ -0.21
RAB5C-209	ENST00000552162	TSPYL5	Q86VY4	417 aa	Predicted RBP	13.73	□□□□□ -0.21
RAB5C-209	ENST00000552162	JAZF1	Q86VZ6	243 aa		13.73	□□□□□ -0.21
RAB5C-209	ENST00000552162	LRRC28	Q86X40	367 aa	Predicted RBP	13.73	□□□□□ -0.21
RAB5C-209	ENST00000552162	RBM45	Q8IUH3	476 aa	Known RBP	13.73	□□□□□ -0.21
RAB5C-209	ENST00000552162	ZNF283	Q8N7M2	679 aa		13.73	□□□□□ -0.21
RAB5C-209	ENST00000552162	OR4D11	Q8NGI4	311 aa		13.73	□□□□□ -0.21
RAB5C-209	ENST00000552162	MPP4	Q96JB8	637 aa		13.73	□□□□□ -0.21
RAB5C-209	ENST00000552162	SMURF2	Q9HAU4	748 aa		13.73	□□□□□ -0.21
RAB5C-209	ENST00000552162	MEPE	Q9NQ76	525 aa	Predicted RBP	13.73	□□□□□ -0.21
RAB5C-209	ENST00000552162	CCDC167	Q9P0B6	97 aa		13.73	□□□□□ -0.21
RAB5C-209	ENST00000552162	MMP24	Q9Y5R2	645 aa		13.73	□□□□□ -0.21
RAB5C-209	ENST00000552162	SOX21	Q9Y651	276 aa	Predicted RBP	13.73	□□□□□ -0.21
RAB5C-209	ENST00000552162	WNK1	Q9H4A3	2382 aa		13.73	□□□□□ -0.21
RAB5C-209	ENST00000552162	IGKV1D-43	A0A0B4J1Z2	117 aa		13.72	□□□□□ -0.21
RAB5C-209	ENST00000552162	TNFRSF1A	P19438	455 aa		13.72	□□□□□ -0.21
RAB5C-209	ENST00000552162	PAX8	Q06710	450 aa		13.72	□□□□□ -0.21
RAB5C-209	ENST00000552162	CDK5R2	Q13319	367 aa		13.72	□□□□□ -0.21
RAB5C-209	ENST00000552162	TAF11	Q15544	211 aa		13.72	□□□□□ -0.21
RAB5C-209	ENST00000552162	C16orf87	Q6PH81	154 aa		13.72	□□□□□ -0.21
RAB5C-209	ENST00000552162	ZER1	Q7Z7L7	766 aa		13.72	□□□□□ -0.21

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