RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 HIST1H2ABP04908 130 aa18.24■□□□□ 0.51
SMARCD1-212ENST00000551966 F13BP05160 661 aa18.24■□□□□ 0.51
SMARCD1-212ENST00000551966 UGT2B15P54855 530 aa18.24■□□□□ 0.51
SMARCD1-212ENST00000551966 PCBP3P57721 371 aaKnown RBP18.24■□□□□ 0.51
SMARCD1-212ENST00000551966 MRPS34P82930 218 aaKnown RBP18.24■□□□□ 0.51
SMARCD1-212ENST00000551966 PSG4Q00888 419 aa18.24■□□□□ 0.51
SMARCD1-212ENST00000551966 C10orf128Q5T292 105 aa18.24■□□□□ 0.51
SMARCD1-212ENST00000551966 EPGNQ6UW88 154 aa18.24■□□□□ 0.51
SMARCD1-212ENST00000551966 HIST3H2AQ7L7L0 130 aa18.24■□□□□ 0.51
SMARCD1-212ENST00000551966 PTOV1Q86YD1 416 aa18.24■□□□□ 0.51
SMARCD1-212ENST00000551966 NOXO1Q8NFA2 376 aa18.24■□□□□ 0.51
SMARCD1-212ENST00000551966 AKR7LQ8NHP1 331 aa18.24■□□□□ 0.51
SMARCD1-212ENST00000551966 ADAMTS16Q8TE57 1224 aa18.24■□□□□ 0.51
SMARCD1-212ENST00000551966 HIST1H2ACQ93077 130 aa18.24■□□□□ 0.51
SMARCD1-212ENST00000551966 PRSS27Q9BQR3 290 aa18.24■□□□□ 0.51
SMARCD1-212ENST00000551966 CYSLTR2Q9NS75 346 aa18.24■□□□□ 0.51
SMARCD1-212ENST00000551966 SLC7A7Q9UM01 511 aa18.24■□□□□ 0.51
SMARCD1-212ENST00000551966 CMYA5Q8N3K9 4069 aa18.23■□□□□ 0.51
SMARCD1-212ENST00000551966 CLDN34H7C241 214 aa18.23■□□□□ 0.51
SMARCD1-212ENST00000551966 UMPSP11172 480 aa18.23■□□□□ 0.51
SMARCD1-212ENST00000551966 ACADSP16219 412 aa18.23■□□□□ 0.51
SMARCD1-212ENST00000551966 MDKP21741 143 aaPredicted RBP18.23■□□□□ 0.51
SMARCD1-212ENST00000551966 RPL18Q07020 188 aaKnown RBP18.23■□□□□ 0.51
SMARCD1-212ENST00000551966 LEG1Q6P5S2 330 aa18.23■□□□□ 0.51
SMARCD1-212ENST00000551966 RFPL4BQ6ZWI9 263 aa18.23■□□□□ 0.51
SMARCD1-212ENST00000551966 JAZF1Q86VZ6 243 aa18.23■□□□□ 0.51
SMARCD1-212ENST00000551966 LRRC28Q86X40 367 aaPredicted RBP18.23■□□□□ 0.51
SMARCD1-212ENST00000551966 ASB10Q8WXI3 467 aa18.23■□□□□ 0.51
SMARCD1-212ENST00000551966 SLC25A28Q96A46 364 aa18.23■□□□□ 0.51
SMARCD1-212ENST00000551966 NMD3Q96D46 503 aaKnown RBP18.23■□□□□ 0.51
SMARCD1-212ENST00000551966 SPDL1Q96EA4 605 aa18.23■□□□□ 0.51
SMARCD1-212ENST00000551966 CCNB1IP1Q9NPC3 277 aa18.23■□□□□ 0.51
SMARCD1-212ENST00000551966 ZDHHC8Q9ULC8 765 aa18.23■□□□□ 0.51
SMARCD1-212ENST00000551966 CENPBD1B2RD01 187 aa18.22■□□□□ 0.51
SMARCD1-212ENST00000551966 CD80P33681 288 aa18.22■□□□□ 0.51
SMARCD1-212ENST00000551966 LIPAP38571 399 aa18.22■□□□□ 0.51
SMARCD1-212ENST00000551966 PPP1CBP62140 327 aa18.22■□□□□ 0.51
SMARCD1-212ENST00000551966 PAX8Q06710 450 aa18.22■□□□□ 0.51
SMARCD1-212ENST00000551966 NANOGNBQ7Z5D8 188 aa18.22■□□□□ 0.51
SMARCD1-212ENST00000551966 SLC19A3Q9BZV2 496 aa18.22■□□□□ 0.51
SMARCD1-212ENST00000551966 KCNN2Q9H2S1 579 aa18.22■□□□□ 0.51
SMARCD1-212ENST00000551966 TMEM106BQ9NUM4 274 aa18.22■□□□□ 0.51
SMARCD1-212ENST00000551966 CCDC167Q9P0B6 97 aa18.22■□□□□ 0.51
SMARCD1-212ENST00000551966 USH1CQ9Y6N9 552 aa18.22■□□□□ 0.51
SMARCD1-212ENST00000551966 VWFP04275 2813 aa18.21■□□□□ 0.51
SMARCD1-212ENST00000551966 A0A0G2JK05 382 aa18.21■□□□□ 0.51
SMARCD1-212ENST00000551966 TRAPPC13A5PLN9 417 aa18.21■□□□□ 0.51
SMARCD1-212ENST00000551966 OMGP23515 440 aa18.21■□□□□ 0.51
SMARCD1-212ENST00000551966 GDI2P50395 445 aaKnown RBP18.21■□□□□ 0.51
SMARCD1-212ENST00000551966 ERVK-25P63136 954 aa18.21■□□□□ 0.51
SMARCD1-212ENST00000551966 TNFAIP6P98066 277 aaPredicted RBP18.21■□□□□ 0.51
SMARCD1-212ENST00000551966 FMODQ06828 376 aa18.21■□□□□ 0.51
SMARCD1-212ENST00000551966 SRSF4Q08170 494 aaKnown RBP18.21■□□□□ 0.51
SMARCD1-212ENST00000551966 CDK5R2Q13319 367 aa18.21■□□□□ 0.51
SMARCD1-212ENST00000551966 SGCAQ16586 387 aa18.21■□□□□ 0.51
SMARCD1-212ENST00000551966 TMEM155Q4W5P6 130 aa18.21■□□□□ 0.51
SMARCD1-212ENST00000551966 RUNDC3AQ59EK9 446 aa18.21■□□□□ 0.51
SMARCD1-212ENST00000551966 ARMC4Q5T2S8 1044 aa18.21■□□□□ 0.51
SMARCD1-212ENST00000551966 DLEU7Q6UYE1 221 aa18.21■□□□□ 0.51
SMARCD1-212ENST00000551966 ZNF283Q8N7M2 679 aa18.21■□□□□ 0.51
SMARCD1-212ENST00000551966 VANGL1Q8TAA9 524 aaPredicted RBP18.21■□□□□ 0.51
SMARCD1-212ENST00000551966 ABHD4Q8TB40 342 aa18.21■□□□□ 0.51
SMARCD1-212ENST00000551966 DIRC2Q96SL1 478 aa18.21■□□□□ 0.51
SMARCD1-212ENST00000551966 MS4A7Q9GZW8 240 aaPredicted RBP18.21■□□□□ 0.51
SMARCD1-212ENST00000551966 WNT5BQ9H1J7 359 aa18.21■□□□□ 0.51
SMARCD1-212ENST00000551966 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.21■□□□□ 0.51
SMARCD1-212ENST00000551966 ANGPT4Q9Y264 503 aa18.21■□□□□ 0.51
SMARCD1-212ENST00000551966 V9GYY5 206 aaPredicted RBP18.21■□□□□ 0.51
SMARCD1-212ENST00000551966 IGHV3OR16-10A0A075B7F0 116 aa18.2■□□□□ 0.5
SMARCD1-212ENST00000551966 A0A1W2PRG6 482 aa18.2■□□□□ 0.5
SMARCD1-212ENST00000551966 A8MXK9 166 aa18.2■□□□□ 0.5
SMARCD1-212ENST00000551966 EVPLLA8MZ36 301 aa18.2■□□□□ 0.5
SMARCD1-212ENST00000551966 F5H0A9 414 aaPredicted RBP18.2■□□□□ 0.5
SMARCD1-212ENST00000551966 ICMTO60725 284 aa18.2■□□□□ 0.5
SMARCD1-212ENST00000551966 ERLIN1O75477 346 aa18.2■□□□□ 0.5
SMARCD1-212ENST00000551966 IGHV4-38-2P0DP08 117 aa18.2■□□□□ 0.5
SMARCD1-212ENST00000551966 FUT1P19526 365 aa18.2■□□□□ 0.5
SMARCD1-212ENST00000551966 AQP2P41181 271 aa18.2■□□□□ 0.5
SMARCD1-212ENST00000551966 PSG7Q13046 419 aa18.2■□□□□ 0.5
SMARCD1-212ENST00000551966 ZMYND11Q15326 602 aa18.2■□□□□ 0.5
SMARCD1-212ENST00000551966 FAM27BQ5VT28 67 aa18.2■□□□□ 0.5
SMARCD1-212ENST00000551966 KLHL36Q8N4N3 616 aa18.2■□□□□ 0.5
SMARCD1-212ENST00000551966 NSMAFQ92636 917 aa18.2■□□□□ 0.5
SMARCD1-212ENST00000551966 HDAC2Q92769 488 aaKnown RBP18.2■□□□□ 0.5
SMARCD1-212ENST00000551966 TMIGD2Q96BF3 282 aa18.2■□□□□ 0.5
SMARCD1-212ENST00000551966 MPP4Q96JB8 637 aa18.2■□□□□ 0.5
SMARCD1-212ENST00000551966 SIGLEC11Q96RL6 698 aa18.2■□□□□ 0.5
SMARCD1-212ENST00000551966 CPPED1Q9BRF8 314 aaPredicted RBP18.2■□□□□ 0.5
SMARCD1-212ENST00000551966 MRI1Q9BV20 369 aa18.2■□□□□ 0.5
SMARCD1-212ENST00000551966 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.2■□□□□ 0.5
SMARCD1-212ENST00000551966 CORO2BQ9UQ03 480 aa18.2■□□□□ 0.5
SMARCD1-212ENST00000551966 MCIDASD6RGH6 385 aa18.19■□□□□ 0.5
SMARCD1-212ENST00000551966 GPANK1O95872 356 aa18.19■□□□□ 0.5
SMARCD1-212ENST00000551966 CD247P20963 164 aa18.19■□□□□ 0.5
SMARCD1-212ENST00000551966 STX1BP61266 288 aa18.19■□□□□ 0.5
SMARCD1-212ENST00000551966 PAX2Q02962 417 aa18.19■□□□□ 0.5
SMARCD1-212ENST00000551966 OCLNQ16625 522 aa18.19■□□□□ 0.5
SMARCD1-212ENST00000551966 MTX3Q5HYI7 312 aa18.19■□□□□ 0.5
SMARCD1-212ENST00000551966 C16orf87Q6PH81 154 aa18.19■□□□□ 0.5
SMARCD1-212ENST00000551966 SLC25A47Q6Q0C1 308 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms