RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 IGHV3-13P01766 116 aa11.47□□□□□ -0.57
CDX2-202ENST00000548877 HNRNPCL4P0DMR1 293 aa11.47□□□□□ -0.57
CDX2-202ENST00000548877 HSPA13P48723 471 aa11.47□□□□□ -0.57
CDX2-202ENST00000548877 TAF11Q15544 211 aa11.47□□□□□ -0.57
CDX2-202ENST00000548877 HFEQ30201 348 aa11.47□□□□□ -0.57
CDX2-202ENST00000548877 ALKBH6Q3KRA9 238 aa11.47□□□□□ -0.57
CDX2-202ENST00000548877 GLYATQ6IB77 296 aa11.47□□□□□ -0.57
CDX2-202ENST00000548877 CYP2R1Q6VVX0 501 aa11.47□□□□□ -0.57
CDX2-202ENST00000548877 ZNF621Q6ZSS3 439 aa11.47□□□□□ -0.57
CDX2-202ENST00000548877 USP51Q70EK9 711 aa11.47□□□□□ -0.57
CDX2-202ENST00000548877 WDFY1Q8IWB7 410 aa11.47□□□□□ -0.57
CDX2-202ENST00000548877 SKA3Q8IX90 412 aa11.47□□□□□ -0.57
CDX2-202ENST00000548877 MICU2Q8IYU8 434 aa11.47□□□□□ -0.57
CDX2-202ENST00000548877 FGFBP3Q8TAT2 258 aa11.47□□□□□ -0.57
CDX2-202ENST00000548877 C11orf40Q8WZ69 217 aa11.47□□□□□ -0.57
CDX2-202ENST00000548877 SLC25A28Q96A46 364 aa11.47□□□□□ -0.57
CDX2-202ENST00000548877 ELMOD3Q96FG2 381 aa11.47□□□□□ -0.57
CDX2-202ENST00000548877 EMC6Q9BV81 110 aa11.47□□□□□ -0.57
CDX2-202ENST00000548877 ULBP2Q9BZM5 246 aa11.47□□□□□ -0.57
CDX2-202ENST00000548877 C1orf198Q9H425 327 aa11.47□□□□□ -0.57
CDX2-202ENST00000548877 SLC25A37Q9NYZ2 338 aa11.47□□□□□ -0.57
CDX2-202ENST00000548877 EGFL7Q9UHF1 273 aa11.47□□□□□ -0.57
CDX2-202ENST00000548877 CACNG2Q9Y698 323 aa11.47□□□□□ -0.57
CDX2-202ENST00000548877 CLIC1O00299 241 aa11.46□□□□□ -0.57
CDX2-202ENST00000548877 MFN2O95140 757 aa11.46□□□□□ -0.57
CDX2-202ENST00000548877 ADH4P08319 380 aa11.46□□□□□ -0.57
CDX2-202ENST00000548877 HOXB9P17482 250 aaPredicted RBP11.46□□□□□ -0.57
CDX2-202ENST00000548877 ATP6V1B2P21281 511 aa11.46□□□□□ -0.57
CDX2-202ENST00000548877 ERFP50548 548 aa11.46□□□□□ -0.57
CDX2-202ENST00000548877 LCN2P80188 198 aa11.46□□□□□ -0.57
CDX2-202ENST00000548877 BAMBIQ13145 260 aa11.46□□□□□ -0.57
CDX2-202ENST00000548877 CYP51A1Q16850 503 aa11.46□□□□□ -0.57
CDX2-202ENST00000548877 FAM98BQ52LJ0 330 aaKnown RBP11.46□□□□□ -0.57
CDX2-202ENST00000548877 OGFRL1Q5TC84 451 aaPredicted RBP11.46□□□□□ -0.57
CDX2-202ENST00000548877 CARD17Q5XLA6 110 aa11.46□□□□□ -0.57
CDX2-202ENST00000548877 C9orf139Q6ZV77 190 aa11.46□□□□□ -0.57
CDX2-202ENST00000548877 PXKQ7Z7A4 578 aa11.46□□□□□ -0.57
CDX2-202ENST00000548877 DPPA2Q7Z7J5 298 aa11.46□□□□□ -0.57
CDX2-202ENST00000548877 CALHM3Q86XJ0 350 aa11.46□□□□□ -0.57
CDX2-202ENST00000548877 MSRB3Q8IXL7 192 aa11.46□□□□□ -0.57
CDX2-202ENST00000548877 PAQR4Q8N4S7 273 aaPredicted RBP11.46□□□□□ -0.57
CDX2-202ENST00000548877 SLC30A7Q8NEW0 376 aa11.46□□□□□ -0.57
CDX2-202ENST00000548877 OR10A6Q8NH74 314 aa11.46□□□□□ -0.57
CDX2-202ENST00000548877 DNAJA4Q8WW22 397 aaPredicted RBP11.46□□□□□ -0.57
CDX2-202ENST00000548877 TXNDC15Q96J42 360 aa11.46□□□□□ -0.57
CDX2-202ENST00000548877 ZNF583Q96ND8 569 aa11.46□□□□□ -0.57
CDX2-202ENST00000548877 DUX5Q96PT3 197 aa11.46□□□□□ -0.57
CDX2-202ENST00000548877 GAL3ST1Q99999 423 aa11.46□□□□□ -0.57
CDX2-202ENST00000548877 BCL2L14Q9BZR8 327 aa11.46□□□□□ -0.57
CDX2-202ENST00000548877 Q9H521 79 aa11.46□□□□□ -0.57
CDX2-202ENST00000548877 SAP30LQ9HAJ7 183 aa11.46□□□□□ -0.57
CDX2-202ENST00000548877 BCL2L10Q9HD36 194 aa11.46□□□□□ -0.57
CDX2-202ENST00000548877 DECR2Q9NUI1 292 aa11.46□□□□□ -0.57
CDX2-202ENST00000548877 THUMPD1Q9NXG2 353 aaKnown RBP11.46□□□□□ -0.57
CDX2-202ENST00000548877 MRPL39Q9NYK5 338 aaKnown RBP11.46□□□□□ -0.57
CDX2-202ENST00000548877 PURGQ9UJV8 347 aaKnown RBP11.46□□□□□ -0.57
CDX2-202ENST00000548877 A0A1B0GUS0 222 aa11.45□□□□□ -0.58
CDX2-202ENST00000548877 H0YJX3 145 aa11.45□□□□□ -0.58
CDX2-202ENST00000548877 BGLAPP02818 100 aa11.45□□□□□ -0.58
CDX2-202ENST00000548877 MT-ND5P03915 603 aa11.45□□□□□ -0.58
CDX2-202ENST00000548877 BCHEP06276 602 aa11.45□□□□□ -0.58
CDX2-202ENST00000548877 PATE4P0C8F1 98 aa11.45□□□□□ -0.58
CDX2-202ENST00000548877 OR8G3PP0DMU2 310 aa11.45□□□□□ -0.58
CDX2-202ENST00000548877 ETFAP13804 333 aa11.45□□□□□ -0.58
CDX2-202ENST00000548877 ZNF12P17014 697 aa11.45□□□□□ -0.58
CDX2-202ENST00000548877 GPX2P18283 190 aa11.45□□□□□ -0.58
CDX2-202ENST00000548877 FASP25445 335 aa11.45□□□□□ -0.58
CDX2-202ENST00000548877 UCP2P55851 309 aa11.45□□□□□ -0.58
CDX2-202ENST00000548877 DSTNP60981 165 aa11.45□□□□□ -0.58
CDX2-202ENST00000548877 SLC3A1Q07837 685 aa11.45□□□□□ -0.58
CDX2-202ENST00000548877 RBBP4Q09028 425 aa11.45□□□□□ -0.58
CDX2-202ENST00000548877 ZNF154Q13106 437 aa11.45□□□□□ -0.58
CDX2-202ENST00000548877 FADDQ13158 208 aa11.45□□□□□ -0.58
CDX2-202ENST00000548877 SLC9A3R2Q15599 337 aa11.45□□□□□ -0.58
CDX2-202ENST00000548877 ARMCX4Q5H9R4 360 aa11.45□□□□□ -0.58
CDX2-202ENST00000548877 SWT1Q5T5J6 900 aaKnown RBP11.45□□□□□ -0.58
CDX2-202ENST00000548877 LEG1Q6P5S2 330 aa11.45□□□□□ -0.58
CDX2-202ENST00000548877 SLC30A8Q8IWU4 369 aa11.45□□□□□ -0.58
CDX2-202ENST00000548877 BCL6BQ8N143 479 aaPredicted RBP11.45□□□□□ -0.58
CDX2-202ENST00000548877 SLC22A24Q8N4F4 322 aa11.45□□□□□ -0.58
CDX2-202ENST00000548877 PAPD5Q8NDF8 572 aaKnown RBP11.45□□□□□ -0.58
CDX2-202ENST00000548877 ICA1LQ8NDH6 482 aa11.45□□□□□ -0.58
CDX2-202ENST00000548877 OR6N1Q8NGY5 312 aa11.45□□□□□ -0.58
CDX2-202ENST00000548877 NRG4Q8WWG1 115 aa11.45□□□□□ -0.58
CDX2-202ENST00000548877 TMEM54Q969K7 222 aa11.45□□□□□ -0.58
CDX2-202ENST00000548877 TMEM19Q96HH6 336 aa11.45□□□□□ -0.58
CDX2-202ENST00000548877 TPT1P8Q9HAU6 139 aa11.45□□□□□ -0.58
CDX2-202ENST00000548877 RIMS3Q9UJD0 308 aa11.45□□□□□ -0.58
CDX2-202ENST00000548877 LRCH1Q9Y2L9 728 aa11.45□□□□□ -0.58
CDX2-202ENST00000548877 AUP1Q9Y679 476 aa11.45□□□□□ -0.58
CDX2-202ENST00000548877 A0A1B0GWA3 101 aa11.44□□□□□ -0.58
CDX2-202ENST00000548877 ZNF726A6NNF4 738 aa11.44□□□□□ -0.58
CDX2-202ENST00000548877 A8MXK9 166 aa11.44□□□□□ -0.58
CDX2-202ENST00000548877 TRAPPC2LH3BP13 241 aa11.44□□□□□ -0.58
CDX2-202ENST00000548877 CXCR6O00574 342 aa11.44□□□□□ -0.58
CDX2-202ENST00000548877 PTHP01270 115 aa11.44□□□□□ -0.58
CDX2-202ENST00000548877 IGHMP01871 453 aa11.44□□□□□ -0.58
CDX2-202ENST00000548877 FAM157BP0CG42 384 aa11.44□□□□□ -0.58
CDX2-202ENST00000548877 PPIAL4GP0DN37 164 aa11.44□□□□□ -0.58
CDX2-202ENST00000548877 RAP2AP10114 183 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms