RNA–Protein interactions for RNA: ENST00000546588.1

VPS29-203, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-203ENST00000546588 ZNF133P52736 654 aaPredicted RBP7.51□□□□□ -1.21
VPS29-203ENST00000546588 CARD18P57730 90 aa7.51□□□□□ -1.21
VPS29-203ENST00000546588 EMX1Q04741 257 aaPredicted RBP7.51□□□□□ -1.21
VPS29-203ENST00000546588 CD69Q07108 199 aa7.51□□□□□ -1.21
VPS29-203ENST00000546588 PUDPQ08623 228 aa7.51□□□□□ -1.21
VPS29-203ENST00000546588 SCRN3Q0VDG4 424 aa7.51□□□□□ -1.21
VPS29-203ENST00000546588 MYBPHQ13203 477 aa7.51□□□□□ -1.21
VPS29-203ENST00000546588 MS4A18Q3C1V0 323 aa7.51□□□□□ -1.21
VPS29-203ENST00000546588 KLHL22Q53GT1 634 aa7.51□□□□□ -1.21
VPS29-203ENST00000546588 MESTQ5EB52 335 aa7.51□□□□□ -1.21
VPS29-203ENST00000546588 CLEC12AQ5QGZ9 265 aa7.51□□□□□ -1.21
VPS29-203ENST00000546588 ABLIM2Q6H8Q1 611 aa7.51□□□□□ -1.21
VPS29-203ENST00000546588 SLC25A25Q6KCM7 469 aa7.51□□□□□ -1.21
VPS29-203ENST00000546588 RPUSD3Q6P087 351 aaKnown RBP7.51□□□□□ -1.21
VPS29-203ENST00000546588 TMPPEQ6ZT21 453 aa7.51□□□□□ -1.21
VPS29-203ENST00000546588 H1FNTQ75WM6 255 aaPredicted RBP7.51□□□□□ -1.21
VPS29-203ENST00000546588 OR2C3Q8N628 320 aa7.51□□□□□ -1.21
VPS29-203ENST00000546588 TMEM178AQ8NBL3 297 aa7.51□□□□□ -1.21
VPS29-203ENST00000546588 SLC37A3Q8NCC5 494 aa7.51□□□□□ -1.21
VPS29-203ENST00000546588 ZNF485Q8NCK3 441 aa7.51□□□□□ -1.21
VPS29-203ENST00000546588 FAM83FQ8NEG4 500 aaPredicted RBP7.51□□□□□ -1.21
VPS29-203ENST00000546588 BPIFB6Q8NFQ5 453 aa7.51□□□□□ -1.21
VPS29-203ENST00000546588 FDCSPQ8NFU4 85 aa7.51□□□□□ -1.21
VPS29-203ENST00000546588 OR13F1Q8NGS4 319 aa7.51□□□□□ -1.21
VPS29-203ENST00000546588 FAR1Q8WVX9 515 aa7.51□□□□□ -1.21
VPS29-203ENST00000546588 PTP4A1Q93096 173 aa7.51□□□□□ -1.21
VPS29-203ENST00000546588 GNRHR2Q96P88 292 aa7.51□□□□□ -1.21
VPS29-203ENST00000546588 TSPAN32Q96QS1 320 aa7.51□□□□□ -1.21
VPS29-203ENST00000546588 IL4I1Q96RQ9 567 aa7.51□□□□□ -1.21
VPS29-203ENST00000546588 TXN2Q99757 166 aa7.51□□□□□ -1.21
VPS29-203ENST00000546588 VRK1Q99986 396 aaPredicted RBP7.51□□□□□ -1.21
VPS29-203ENST00000546588 RHNO1Q9BSD3 238 aa7.51□□□□□ -1.21
VPS29-203ENST00000546588 COPS4Q9BT78 406 aa7.51□□□□□ -1.21
VPS29-203ENST00000546588 SOX7Q9BT81 388 aa7.51□□□□□ -1.21
VPS29-203ENST00000546588 KATNB1Q9BVA0 655 aa7.51□□□□□ -1.21
VPS29-203ENST00000546588 IFT27Q9BW83 186 aa7.51□□□□□ -1.21
VPS29-203ENST00000546588 TTTY12Q9BZ98 90 aa7.51□□□□□ -1.21
VPS29-203ENST00000546588 OR11A1Q9GZK7 315 aa7.51□□□□□ -1.21
VPS29-203ENST00000546588 WDR12Q9GZL7 423 aaKnown RBP7.51□□□□□ -1.21
VPS29-203ENST00000546588 TXNIPQ9H3M7 391 aa7.51□□□□□ -1.21
VPS29-203ENST00000546588 NEK6Q9HC98 313 aa7.51□□□□□ -1.21
VPS29-203ENST00000546588 CHST11Q9NPF2 352 aa7.51□□□□□ -1.21
VPS29-203ENST00000546588 ACOT13Q9NPJ3 140 aa7.51□□□□□ -1.21
VPS29-203ENST00000546588 INPP5EQ9NRR6 644 aa7.51□□□□□ -1.21
VPS29-203ENST00000546588 B4GALT7Q9UBV7 327 aa7.51□□□□□ -1.21
VPS29-203ENST00000546588 AASSQ9UDR5 926 aa7.51□□□□□ -1.21
VPS29-203ENST00000546588 IL20RAQ9UHF4 553 aa7.51□□□□□ -1.21
VPS29-203ENST00000546588 RPH3AQ9Y2J0 694 aaPredicted RBP7.51□□□□□ -1.21
VPS29-203ENST00000546588 A0A1W2PPL8 197 aa7.5□□□□□ -1.21
VPS29-203ENST00000546588 DPPA5A6NC42 116 aa7.5□□□□□ -1.21
VPS29-203ENST00000546588 RIIAD1A6NNX1 92 aa7.5□□□□□ -1.21
VPS29-203ENST00000546588 K7ENP7 123 aa7.5□□□□□ -1.21
VPS29-203ENST00000546588 M0R129 80 aa7.5□□□□□ -1.21
VPS29-203ENST00000546588 TRAF3IP2O43734 574 aaPredicted RBP7.5□□□□□ -1.21
VPS29-203ENST00000546588 EIF1BO60739 113 aaKnown RBP7.5□□□□□ -1.21
VPS29-203ENST00000546588 FAM20BO75063 409 aa7.5□□□□□ -1.21
VPS29-203ENST00000546588 VAMP5O95183 116 aa7.5□□□□□ -1.21
VPS29-203ENST00000546588 SLC2A10O95528 541 aa7.5□□□□□ -1.21
VPS29-203ENST00000546588 PPP1R3DO95685 299 aa7.5□□□□□ -1.21
VPS29-203ENST00000546588 IGHG3P01860 377 aa7.5□□□□□ -1.21
VPS29-203ENST00000546588 MT-ND2P03891 347 aa7.5□□□□□ -1.21
VPS29-203ENST00000546588 ADRA2AP08913 450 aa7.5□□□□□ -1.21
VPS29-203ENST00000546588 RFPL3SP0C7P2 107 aa7.5□□□□□ -1.21
VPS29-203ENST00000546588 CLUP10909 449 aa7.5□□□□□ -1.21
VPS29-203ENST00000546588 HIST1H1CP16403 213 aaKnown RBP7.5□□□□□ -1.21
VPS29-203ENST00000546588 PTNP21246 168 aa7.5□□□□□ -1.21
VPS29-203ENST00000546588 CTSSP25774 331 aa7.5□□□□□ -1.21
VPS29-203ENST00000546588 DCKP27707 260 aa7.5□□□□□ -1.21
VPS29-203ENST00000546588 AQP2P41181 271 aa7.5□□□□□ -1.21
VPS29-203ENST00000546588 MTNR1AP48039 350 aa7.5□□□□□ -1.21
VPS29-203ENST00000546588 CDH11P55287 796 aa7.5□□□□□ -1.21
VPS29-203ENST00000546588 CDH15P55291 814 aa7.5□□□□□ -1.21
VPS29-203ENST00000546588 RAC3P60763 192 aa7.5□□□□□ -1.21
VPS29-203ENST00000546588 RPL27P61353 136 aaKnown RBP7.5□□□□□ -1.21
VPS29-203ENST00000546588 TSPAN5P62079 268 aa7.5□□□□□ -1.21
VPS29-203ENST00000546588 CSNK2A1P68400 391 aaPredicted RBP7.5□□□□□ -1.21
VPS29-203ENST00000546588 SLC35A1P78382 337 aa7.5□□□□□ -1.21
VPS29-203ENST00000546588 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.5□□□□□ -1.21
VPS29-203ENST00000546588 ACSM1Q08AH1 577 aa7.5□□□□□ -1.21
VPS29-203ENST00000546588 ST3GAL4Q11206 333 aa7.5□□□□□ -1.21
VPS29-203ENST00000546588 ITGADQ13349 1161 aa7.5□□□□□ -1.21
VPS29-203ENST00000546588 CRMP1Q14194 572 aa7.5□□□□□ -1.21
VPS29-203ENST00000546588 KCNMB1Q16558 191 aa7.5□□□□□ -1.21
VPS29-203ENST00000546588 AANATQ16613 207 aa7.5□□□□□ -1.21
VPS29-203ENST00000546588 MLANAQ16655 118 aa7.5□□□□□ -1.21
VPS29-203ENST00000546588 HIST3H3Q16695 136 aa7.5□□□□□ -1.21
VPS29-203ENST00000546588 NADK2Q4G0N4 442 aa7.5□□□□□ -1.21
VPS29-203ENST00000546588 CLVS2Q5SYC1 327 aa7.5□□□□□ -1.21
VPS29-203ENST00000546588 LINC01590Q5TEZ4 76 aa7.5□□□□□ -1.21
VPS29-203ENST00000546588 SPINK14Q6IE38 97 aa7.5□□□□□ -1.21
VPS29-203ENST00000546588 INO80CQ6PI98 192 aaPredicted RBP7.5□□□□□ -1.21
VPS29-203ENST00000546588 C19orf48Q6RUI8 117 aa7.5□□□□□ -1.21
VPS29-203ENST00000546588 LCNL1Q6ZST4 164 aa7.5□□□□□ -1.21
VPS29-203ENST00000546588 KCTD8Q6ZWB6 473 aa7.5□□□□□ -1.21
VPS29-203ENST00000546588 AHSA2Q719I0 299 aa7.5□□□□□ -1.21
VPS29-203ENST00000546588 MEPCEQ7L2J0 689 aaKnown RBP7.5□□□□□ -1.21
VPS29-203ENST00000546588 CXXC5Q7LFL8 322 aaKnown RBP7.5□□□□□ -1.21
VPS29-203ENST00000546588 LIX1LQ8IVB5 337 aa7.5□□□□□ -1.21
VPS29-203ENST00000546588 CDH26Q8IXH8 852 aa7.5□□□□□ -1.21
VPS29-203ENST00000546588 FAM109AQ8N4B1 249 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms