RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 YPEL5P62699 121 aa7.9□□□□□ -1.15
TDP1-204ENST00000545686 PPIAP62937 165 aaKnown RBP7.9□□□□□ -1.15
TDP1-204ENST00000545686 NNATQ16517 81 aa7.9□□□□□ -1.15
TDP1-204ENST00000545686 ALG11Q2TAA5 492 aa7.9□□□□□ -1.15
TDP1-204ENST00000545686 PRTGQ2VWP7 1150 aa7.9□□□□□ -1.15
TDP1-204ENST00000545686 PAN3Q58A45 887 aaKnown RBP7.9□□□□□ -1.15
TDP1-204ENST00000545686 ASPHD2Q6ICH7 369 aa7.9□□□□□ -1.15
TDP1-204ENST00000545686 SLC18B1Q6NT16 456 aa7.9□□□□□ -1.15
TDP1-204ENST00000545686 C17orf107Q6ZR85 190 aa7.9□□□□□ -1.15
TDP1-204ENST00000545686 GALNT16Q8N428 558 aa7.9□□□□□ -1.15
TDP1-204ENST00000545686 BPIFCQ8NFQ6 507 aa7.9□□□□□ -1.15
TDP1-204ENST00000545686 MARC2Q969Z3 335 aa7.9□□□□□ -1.15
TDP1-204ENST00000545686 BMFQ96LC9 184 aa7.9□□□□□ -1.15
TDP1-204ENST00000545686 VRK1Q99986 396 aaPredicted RBP7.9□□□□□ -1.15
TDP1-204ENST00000545686 SYT4Q9H2B2 425 aa7.9□□□□□ -1.15
TDP1-204ENST00000545686 TMEM185BQ9H7F4 350 aa7.9□□□□□ -1.15
TDP1-204ENST00000545686 PRMT8Q9NR22 394 aaPredicted RBP7.9□□□□□ -1.15
TDP1-204ENST00000545686 STARD5Q9NSY2 213 aa7.9□□□□□ -1.15
TDP1-204ENST00000545686 NDRG3Q9UGV2 375 aa7.9□□□□□ -1.15
TDP1-204ENST00000545686 PLEKHA6Q9Y2H5 1048 aa7.9□□□□□ -1.15
TDP1-204ENST00000545686 KIR2DS5A0A0G2JLQ3 304 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 A0A0G2JNG1 304 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 A0A1W2PPC1 479 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 OR5K4A6NMS3 321 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 DISC1C4P0D8 188 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 H0Y8X5 98 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 KIR2DS3K7RE56 304 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 XKRYO14609 159 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 IL2RAP01589 272 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 FCER2P06734 321 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 HPGDP15428 266 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 RAB6AP20340 208 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 TACR3P29371 465 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 DLSTP36957 453 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 LUMP51884 338 aaPredicted RBP7.89□□□□□ -1.15
TDP1-204ENST00000545686 CTAG1AP78358 180 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 DEFA5Q01523 94 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 BIKQ13323 160 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 SNTB1Q13884 538 aaKnown RBP7.89□□□□□ -1.15
TDP1-204ENST00000545686 KIR2DS5Q14953 304 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 CD226Q15762 336 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 MEP1BQ16820 701 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 TMEM196Q5HYL7 178 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 FAHD2BQ6P2I3 314 aaPredicted RBP7.89□□□□□ -1.15
TDP1-204ENST00000545686 KCTD18Q6PI47 426 aaPredicted RBP7.89□□□□□ -1.15
TDP1-204ENST00000545686 NDUFAF7Q7L592 441 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 OR2W3Q7Z3T1 314 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 TMED4Q7Z7H5 227 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 ZDHHC22Q8N966 263 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 PHOSPHO2Q8TCD6 241 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 ATOH1Q92858 354 aaPredicted RBP7.89□□□□□ -1.15
TDP1-204ENST00000545686 FAHD2AQ96GK7 314 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 AMELYQ99218 206 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 TINAGL1Q9GZM7 467 aaPredicted RBP7.89□□□□□ -1.15
TDP1-204ENST00000545686 SLC6A17Q9H1V8 727 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 S1PR5Q9H228 398 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 HPF1Q9NWY4 346 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 NOP16Q9Y3C1 178 aaKnown RBP7.89□□□□□ -1.15
TDP1-204ENST00000545686 CLDN16Q9Y5I7 305 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 FREM3P0C091 2139 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 LOC390937A0A1W2PQ73 354 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 RNF222A6NCQ9 220 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 OR14I1A6ND48 311 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 NUDT19A8MXV4 375 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 OIP5O43482 229 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 ATG12O94817 140 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 IL33O95760 270 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 HLA-AP01891 365 aaKnown RBP7.89□□□□□ -1.15
TDP1-204ENST00000545686 CLPSP04118 112 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 PBX2P40425 430 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 CCR4P51679 360 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 HSD17B7P56937 341 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 NR0B2Q15466 257 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 ODF4Q2M2E3 257 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 COL13A1Q5TAT6 717 aaPredicted RBP7.89□□□□□ -1.15
TDP1-204ENST00000545686 RAB12Q6IQ22 244 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 PAPD4Q6PIY7 484 aaKnown RBP7.89□□□□□ -1.15
TDP1-204ENST00000545686 LRRC69Q6ZNQ3 347 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 ZNF627Q7L945 461 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 LYG2Q86SG7 212 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 SLC25A42Q86VD7 318 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 CATSPERDQ86XM0 798 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 ARMC10Q8N2F6 343 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 BPIFB2Q8N4F0 458 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 NKAIN3Q8N8D7 197 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 PLPP7Q8NBV4 271 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 OR13C8Q8NGS7 320 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 PHOSPHO1Q8TCT1 267 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 GPBAR1Q8TDU6 330 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 ASB5Q8WWX0 329 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 ZBTB8AQ96BR9 441 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 KTI12Q96EK9 354 aaPredicted RBP7.89□□□□□ -1.15
TDP1-204ENST00000545686 PDCD10Q9BUL8 212 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 PLA2G2FQ9BZM2 168 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 ADAM19Q9H013 955 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 WDR13Q9H1Z4 485 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 KCNK15Q9H427 330 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 GAREM1Q9H706 876 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 WBP1LQ9NX94 342 aa7.89□□□□□ -1.15
TDP1-204ENST00000545686 ZNF230Q9UIE0 474 aaPredicted RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms