RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 SERPINI2O75830 405 aa12.32□□□□□ -0.44
RTN3-214ENST00000545432 ALX3O95076 343 aa12.32□□□□□ -0.44
RTN3-214ENST00000545432 LYPD3O95274 346 aa12.32□□□□□ -0.44
RTN3-214ENST00000545432 ANP32DO95626 131 aa12.32□□□□□ -0.44
RTN3-214ENST00000545432 ASAH2BP0C7U1 165 aa12.32□□□□□ -0.44
RTN3-214ENST00000545432 TUBG1P23258 451 aa12.32□□□□□ -0.44
RTN3-214ENST00000545432 MDH2P40926 338 aaKnown RBP12.32□□□□□ -0.44
RTN3-214ENST00000545432 ZNF84P51523 738 aa12.32□□□□□ -0.44
RTN3-214ENST00000545432 SPATA46Q5T0L3 261 aa12.32□□□□□ -0.44
RTN3-214ENST00000545432 HHATQ5VTY9 493 aa12.32□□□□□ -0.44
RTN3-214ENST00000545432 ZNF613Q6PF04 617 aa12.32□□□□□ -0.44
RTN3-214ENST00000545432 FIP1L1Q6UN15 594 aaKnown RBP12.32□□□□□ -0.44
RTN3-214ENST00000545432 THOC1Q96FV9 657 aaKnown RBP12.32□□□□□ -0.44
RTN3-214ENST00000545432 MAELQ96JY0 434 aaKnown RBP12.32□□□□□ -0.44
RTN3-214ENST00000545432 ZNF347Q96SE7 839 aa12.32□□□□□ -0.44
RTN3-214ENST00000545432 ZNF607Q96SK3 696 aa12.32□□□□□ -0.44
RTN3-214ENST00000545432 ZNF426Q9BUY5 554 aa12.32□□□□□ -0.44
RTN3-214ENST00000545432 SPATA5L1Q9BVQ7 753 aa12.32□□□□□ -0.44
RTN3-214ENST00000545432 CHIAQ9BZP6 476 aa12.32□□□□□ -0.44
RTN3-214ENST00000545432 RAD21L1Q9H4I0 556 aa12.32□□□□□ -0.44
RTN3-214ENST00000545432 RMND5AQ9H871 391 aa12.32□□□□□ -0.44
RTN3-214ENST00000545432 MSL2Q9HCI7 577 aa12.32□□□□□ -0.44
RTN3-214ENST00000545432 SDR39U1Q9NRG7 319 aaPredicted RBP12.32□□□□□ -0.44
RTN3-214ENST00000545432 TUBG2Q9NRH3 451 aa12.32□□□□□ -0.44
RTN3-214ENST00000545432 ZIM2Q9NZV7 527 aa12.32□□□□□ -0.44
RTN3-214ENST00000545432 UGT2A1Q9Y4X1 527 aa12.32□□□□□ -0.44
RTN3-214ENST00000545432 POMT1Q9Y6A1 747 aa12.32□□□□□ -0.44
RTN3-214ENST00000545432 IGHV3OR16-10A0A075B7F0 116 aa12.31□□□□□ -0.44
RTN3-214ENST00000545432 CEACAM18A8MTB9 384 aa12.31□□□□□ -0.44
RTN3-214ENST00000545432 TMEM178BH3BS89 294 aa12.31□□□□□ -0.44
RTN3-214ENST00000545432 IGHG1P01857 330 aa12.31□□□□□ -0.44
RTN3-214ENST00000545432 THY1P04216 161 aa12.31□□□□□ -0.44
RTN3-214ENST00000545432 CRYBA1P05813 215 aa12.31□□□□□ -0.44
RTN3-214ENST00000545432 IDO1P14902 403 aa12.31□□□□□ -0.44
RTN3-214ENST00000545432 ZNF32P17041 273 aa12.31□□□□□ -0.44
RTN3-214ENST00000545432 TNFRSF1AP19438 455 aa12.31□□□□□ -0.44
RTN3-214ENST00000545432 EPHA3P29320 983 aa12.31□□□□□ -0.44
RTN3-214ENST00000545432 RBMXP38159 391 aaKnown RBP12.31□□□□□ -0.44
RTN3-214ENST00000545432 PPP1CBP62140 327 aa12.31□□□□□ -0.44
RTN3-214ENST00000545432 PSG4Q00888 419 aa12.31□□□□□ -0.44
RTN3-214ENST00000545432 HSF2Q03933 536 aa12.31□□□□□ -0.44
RTN3-214ENST00000545432 PSG7Q13046 419 aa12.31□□□□□ -0.44
RTN3-214ENST00000545432 MELKQ14680 651 aa12.31□□□□□ -0.44
RTN3-214ENST00000545432 PDCD1Q15116 288 aa12.31□□□□□ -0.44
RTN3-214ENST00000545432 BEAN1Q3B7T3 259 aa12.31□□□□□ -0.44
RTN3-214ENST00000545432 REEP3Q6NUK4 255 aa12.31□□□□□ -0.44
RTN3-214ENST00000545432 BTNL3Q6UXE8 466 aa12.31□□□□□ -0.44
RTN3-214ENST00000545432 Q6ZR03 302 aa12.31□□□□□ -0.44
RTN3-214ENST00000545432 RFPL4BQ6ZWI9 263 aa12.31□□□□□ -0.44
RTN3-214ENST00000545432 ZER1Q7Z7L7 766 aa12.31□□□□□ -0.44
RTN3-214ENST00000545432 MUC20Q8N307 709 aaPredicted RBP12.31□□□□□ -0.44
RTN3-214ENST00000545432 LRRC18Q8N456 261 aa12.31□□□□□ -0.44
RTN3-214ENST00000545432 OR10S1Q8NGN2 331 aa12.31□□□□□ -0.44
RTN3-214ENST00000545432 LINC01006Q8NI28 216 aa12.31□□□□□ -0.44
RTN3-214ENST00000545432 TMEM109Q9BVC6 243 aa12.31□□□□□ -0.44
RTN3-214ENST00000545432 SMURF2Q9HAU4 748 aa12.31□□□□□ -0.44
RTN3-214ENST00000545432 TMEM165Q9HC07 324 aa12.31□□□□□ -0.44
RTN3-214ENST00000545432 SSU72Q9NP77 194 aaKnown RBP12.31□□□□□ -0.44
RTN3-214ENST00000545432 IL19Q9UHD0 177 aa12.31□□□□□ -0.44
RTN3-214ENST00000545432 ZNF229Q9UJW7 825 aa12.31□□□□□ -0.44
RTN3-214ENST00000545432 TRAV40A0A0B4J280 105 aa12.3□□□□□ -0.44
RTN3-214ENST00000545432 C5orf49A4QMS7 147 aa12.3□□□□□ -0.44
RTN3-214ENST00000545432 PRORSD1PA6NEY8 169 aa12.3□□□□□ -0.44
RTN3-214ENST00000545432 IFNL4K9M1U5 179 aa12.3□□□□□ -0.44
RTN3-214ENST00000545432 CHP2O43745 196 aa12.3□□□□□ -0.44
RTN3-214ENST00000545432 OR6A2O95222 327 aa12.3□□□□□ -0.44
RTN3-214ENST00000545432 TSPAN19P0C672 248 aa12.3□□□□□ -0.44
RTN3-214ENST00000545432 KITLGP21583 273 aa12.3□□□□□ -0.44
RTN3-214ENST00000545432 CCNOP22674 350 aa12.3□□□□□ -0.44
RTN3-214ENST00000545432 RGS8P57771 180 aaPredicted RBP12.3□□□□□ -0.44
RTN3-214ENST00000545432 FAM27BQ5VT28 67 aa12.3□□□□□ -0.44
RTN3-214ENST00000545432 C1QL4Q86Z23 238 aa12.3□□□□□ -0.44
RTN3-214ENST00000545432 C10orf111Q8N326 155 aa12.3□□□□□ -0.44
RTN3-214ENST00000545432 C10orf53Q8N6V4 93 aa12.3□□□□□ -0.44
RTN3-214ENST00000545432 HIPK4Q8NE63 616 aa12.3□□□□□ -0.44
RTN3-214ENST00000545432 NOXO1Q8NFA2 376 aa12.3□□□□□ -0.44
RTN3-214ENST00000545432 FAM71F1Q96KD3 344 aaPredicted RBP12.3□□□□□ -0.44
RTN3-214ENST00000545432 SSBP3Q9BWW4 388 aaPredicted RBP12.3□□□□□ -0.44
RTN3-214ENST00000545432 WNT5BQ9H1J7 359 aa12.3□□□□□ -0.44
RTN3-214ENST00000545432 WDR55Q9H6Y2 383 aaPredicted RBP12.3□□□□□ -0.44
RTN3-214ENST00000545432 NANSQ9NR45 359 aa12.3□□□□□ -0.44
RTN3-214ENST00000545432 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.3□□□□□ -0.44
RTN3-214ENST00000545432 RNF114Q9Y508 228 aa12.3□□□□□ -0.44
RTN3-214ENST00000545432 WDR91A4D1P6 747 aa12.29□□□□□ -0.44
RTN3-214ENST00000545432 C5orf58C9J3I9 102 aa12.29□□□□□ -0.44
RTN3-214ENST00000545432 TNFRSF13BO14836 293 aaPredicted RBP12.29□□□□□ -0.44
RTN3-214ENST00000545432 RNF13O43567 381 aa12.29□□□□□ -0.44
RTN3-214ENST00000545432 TRMUO75648 421 aaKnown RBP12.29□□□□□ -0.44
RTN3-214ENST00000545432 CH25HO95992 272 aa12.29□□□□□ -0.44
RTN3-214ENST00000545432 MELTFP08582 738 aa12.29□□□□□ -0.44
RTN3-214ENST00000545432 GDI2P50395 445 aaKnown RBP12.29□□□□□ -0.44
RTN3-214ENST00000545432 NCALDP61601 193 aa12.29□□□□□ -0.44
RTN3-214ENST00000545432 CDK6Q00534 326 aa12.29□□□□□ -0.44
RTN3-214ENST00000545432 STX3Q13277 289 aa12.29□□□□□ -0.44
RTN3-214ENST00000545432 LRIF1Q5T3J3 769 aa12.29□□□□□ -0.44
RTN3-214ENST00000545432 ZNF620Q6ZNG0 422 aa12.29□□□□□ -0.44
RTN3-214ENST00000545432 Q6ZPA2 131 aa12.29□□□□□ -0.44
RTN3-214ENST00000545432 KRT73Q86Y46 540 aa12.29□□□□□ -0.44
RTN3-214ENST00000545432 MSRB3Q8IXL7 192 aa12.29□□□□□ -0.44
RTN3-214ENST00000545432 NFKBIDQ8NI38 313 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms