RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545	SKA3	Q8IX90	412 aa		8.9	□□□□□ -0.98
CPSF7-221	ENST00000543545	CCDC36	Q8IYA8	594 aa		8.9	□□□□□ -0.98
CPSF7-221	ENST00000543545	C8orf59	Q8N0T1	100 aa	Predicted RBP	8.9	□□□□□ -0.98
CPSF7-221	ENST00000543545	C17orf78	Q8N4C9	275 aa		8.9	□□□□□ -0.98
CPSF7-221	ENST00000543545	ZNF511	Q8NB15	262 aa		8.9	□□□□□ -0.98
CPSF7-221	ENST00000543545	ZNRF4	Q8WWF5	429 aa		8.9	□□□□□ -0.98
CPSF7-221	ENST00000543545	NANOS1	Q8WY41	292 aa	Known RBP	8.9	□□□□□ -0.98
CPSF7-221	ENST00000543545	HSD17B8	Q92506	261 aa		8.9	□□□□□ -0.98
CPSF7-221	ENST00000543545	ZMYND19	Q96E35	227 aa	Predicted RBP	8.9	□□□□□ -0.98
CPSF7-221	ENST00000543545		Q96MT0	163 aa		8.9	□□□□□ -0.98
CPSF7-221	ENST00000543545	ZNF582	Q96NG8	517 aa	Predicted RBP	8.9	□□□□□ -0.98
CPSF7-221	ENST00000543545	NELFA	Q9H3P2	528 aa		8.9	□□□□□ -0.98
CPSF7-221	ENST00000543545	NPDC1	Q9NQX5	325 aa	Predicted RBP	8.9	□□□□□ -0.98
CPSF7-221	ENST00000543545	SLC17A5	Q9NRA2	495 aa		8.9	□□□□□ -0.98
CPSF7-221	ENST00000543545	AASS	Q9UDR5	926 aa		8.9	□□□□□ -0.98
CPSF7-221	ENST00000543545	AMDHD2	Q9Y303	409 aa		8.9	□□□□□ -0.98
CPSF7-221	ENST00000543545	HIVEP3	Q5T1R4	2406 aa		8.9	□□□□□ -0.99
CPSF7-221	ENST00000543545	MED12L	Q86YW9	2145 aa		8.89	□□□□□ -0.99
CPSF7-221	ENST00000543545	DOCK7	Q96N67	2140 aa		8.89	□□□□□ -0.99
CPSF7-221	ENST00000543545	CLEC18A	A5D8T8	446 aa		8.89	□□□□□ -0.99
CPSF7-221	ENST00000543545	SLC22A31	A6NKX4	558 aa		8.89	□□□□□ -0.99
CPSF7-221	ENST00000543545		E9PQ18	207 aa		8.89	□□□□□ -0.99
CPSF7-221	ENST00000543545	C19orf84	I3L1E1	186 aa		8.89	□□□□□ -0.99
CPSF7-221	ENST00000543545	PRODH	O43272	600 aa		8.89	□□□□□ -0.99
CPSF7-221	ENST00000543545	TMCC2	O75069	709 aa		8.89	□□□□□ -0.99
CPSF7-221	ENST00000543545	ENTPD6	O75354	484 aa		8.89	□□□□□ -0.99
CPSF7-221	ENST00000543545	RAB36	O95755	333 aa		8.89	□□□□□ -0.99
CPSF7-221	ENST00000543545	TF	P02787	698 aa		8.89	□□□□□ -0.99
CPSF7-221	ENST00000543545	SCG5	P05408	212 aa		8.89	□□□□□ -0.99
CPSF7-221	ENST00000543545	PATE4	P0C8F1	98 aa		8.89	□□□□□ -0.99
CPSF7-221	ENST00000543545	CCKAR	P32238	428 aa		8.89	□□□□□ -0.99
CPSF7-221	ENST00000543545	PEX19	P40855	299 aa		8.89	□□□□□ -0.99
CPSF7-221	ENST00000543545	PCBD1	P61457	104 aa		8.89	□□□□□ -0.99
CPSF7-221	ENST00000543545	ADAM8	P78325	824 aa		8.89	□□□□□ -0.99
CPSF7-221	ENST00000543545	EFNB1	P98172	346 aa		8.89	□□□□□ -0.99
CPSF7-221	ENST00000543545	PPA1	Q15181	289 aa		8.89	□□□□□ -0.99
CPSF7-221	ENST00000543545	TAB1	Q15750	504 aa		8.89	□□□□□ -0.99
CPSF7-221	ENST00000543545	MEP1B	Q16820	701 aa		8.89	□□□□□ -0.99
CPSF7-221	ENST00000543545	NRN1L	Q496H8	165 aa		8.89	□□□□□ -0.99
CPSF7-221	ENST00000543545	SLC35D3	Q5M8T2	416 aa		8.89	□□□□□ -0.99
CPSF7-221	ENST00000543545	FAM27B	Q5VT28	67 aa		8.89	□□□□□ -0.99
CPSF7-221	ENST00000543545	AADACL4	Q5VUY2	407 aa		8.89	□□□□□ -0.99
CPSF7-221	ENST00000543545	ZNF691	Q5VV52	312 aa		8.89	□□□□□ -0.99
CPSF7-221	ENST00000543545	MEDAG	Q5VYS4	303 aa		8.89	□□□□□ -0.99
CPSF7-221	ENST00000543545	TMEM53	Q6P2H8	277 aa		8.89	□□□□□ -0.99
CPSF7-221	ENST00000543545	UGT2A3	Q6UWM9	527 aa		8.89	□□□□□ -0.99
CPSF7-221	ENST00000543545	CLEC18B	Q6UXF7	455 aa		8.89	□□□□□ -0.99
CPSF7-221	ENST00000543545	MEX3B	Q6ZN04	569 aa	Known RBP	8.89	□□□□□ -0.99
CPSF7-221	ENST00000543545	THAP5	Q7Z6K1	395 aa		8.89	□□□□□ -0.99
CPSF7-221	ENST00000543545	ERI1	Q8IV48	349 aa	Known RBP	8.89	□□□□□ -0.99
CPSF7-221	ENST00000543545	ENTHD1	Q8IYW4	607 aa		8.89	□□□□□ -0.99
CPSF7-221	ENST00000543545	WDR31	Q8NA23	367 aa		8.89	□□□□□ -0.99
CPSF7-221	ENST00000543545	CLEC18C	Q8NCF0	446 aa		8.89	□□□□□ -0.99
CPSF7-221	ENST00000543545	SLC26A10	Q8NG04	563 aa		8.89	□□□□□ -0.99
CPSF7-221	ENST00000543545	OR2AJ1	Q8NGZ0	328 aa		8.89	□□□□□ -0.99
CPSF7-221	ENST00000543545	RHOXF1	Q8NHV9	184 aa		8.89	□□□□□ -0.99
CPSF7-221	ENST00000543545	RFK	Q969G6	155 aa		8.89	□□□□□ -0.99
CPSF7-221	ENST00000543545	WFIKKN1	Q96NZ8	548 aa		8.89	□□□□□ -0.99
CPSF7-221	ENST00000543545	INTS14	Q96SY0	518 aa		8.89	□□□□□ -0.99
CPSF7-221	ENST00000543545	TEAD3	Q99594	435 aa		8.89	□□□□□ -0.99
CPSF7-221	ENST00000543545	ZNF184	Q99676	751 aa	Predicted RBP	8.89	□□□□□ -0.99
CPSF7-221	ENST00000543545	ZNF416	Q9BWM5	594 aa		8.89	□□□□□ -0.99
CPSF7-221	ENST00000543545	OR10A4	Q9H209	315 aa		8.89	□□□□□ -0.99
CPSF7-221	ENST00000543545		Q9H521	79 aa		8.89	□□□□□ -0.99
CPSF7-221	ENST00000543545	OBP2B	Q9NPH6	170 aa		8.89	□□□□□ -0.99
CPSF7-221	ENST00000543545	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	8.89	□□□□□ -0.99
CPSF7-221	ENST00000543545	MYO18B	Q8IUG5	2567 aa		8.88	□□□□□ -0.99
CPSF7-221	ENST00000543545	ZNF593	O00488	134 aa	Predicted RBP	8.88	□□□□□ -0.99
CPSF7-221	ENST00000543545	UBL3	O95164	117 aa		8.88	□□□□□ -0.99
CPSF7-221	ENST00000543545	MRPL3	P09001	348 aa	Known RBP	8.88	□□□□□ -0.99
CPSF7-221	ENST00000543545	CST2	P09228	141 aa		8.88	□□□□□ -0.99
CPSF7-221	ENST00000543545	GNAO1	P09471	354 aa		8.88	□□□□□ -0.99
CPSF7-221	ENST00000543545	SPARC	P09486	303 aa		8.88	□□□□□ -0.99
CPSF7-221	ENST00000543545	GAA	P10253	952 aa		8.88	□□□□□ -0.99
CPSF7-221	ENST00000543545	HTR1F	P30939	366 aa		8.88	□□□□□ -0.99
CPSF7-221	ENST00000543545	ARR3	P36575	388 aa		8.88	□□□□□ -0.99
CPSF7-221	ENST00000543545	NAA10	P41227	235 aa	Predicted RBP	8.88	□□□□□ -0.99
CPSF7-221	ENST00000543545	ENTPD1	P49961	510 aa		8.88	□□□□□ -0.99
CPSF7-221	ENST00000543545	ZNF83	P51522	516 aa		8.88	□□□□□ -0.99
CPSF7-221	ENST00000543545	LSM6	P62312	80 aa	Known RBP	8.88	□□□□□ -0.99
CPSF7-221	ENST00000543545	RAB1A	P62820	205 aa		8.88	□□□□□ -0.99
CPSF7-221	ENST00000543545	PLP2	Q04941	152 aa		8.88	□□□□□ -0.99
CPSF7-221	ENST00000543545	MAD2L1BP	Q15013	274 aa	Predicted RBP	8.88	□□□□□ -0.99
CPSF7-221	ENST00000543545	OCLN	Q16625	522 aa		8.88	□□□□□ -0.99
CPSF7-221	ENST00000543545	GSG1	Q2KHT4	349 aa		8.88	□□□□□ -0.99
CPSF7-221	ENST00000543545	LINC01590	Q5TEZ4	76 aa		8.88	□□□□□ -0.99
CPSF7-221	ENST00000543545	TMEM154	Q6P9G4	183 aa		8.88	□□□□□ -0.99
CPSF7-221	ENST00000543545	LYPD4	Q6UWN0	246 aa		8.88	□□□□□ -0.99
CPSF7-221	ENST00000543545	FOXL2NB	Q6ZUU3	175 aa		8.88	□□□□□ -0.99
CPSF7-221	ENST00000543545	ZNF627	Q7L945	461 aa		8.88	□□□□□ -0.99
CPSF7-221	ENST00000543545	DPPA2	Q7Z7J5	298 aa		8.88	□□□□□ -0.99
CPSF7-221	ENST00000543545	MDP1	Q86V88	176 aa		8.88	□□□□□ -0.99
CPSF7-221	ENST00000543545	LINC00346	Q8IVM7	164 aa		8.88	□□□□□ -0.99
CPSF7-221	ENST00000543545	OR6N2	Q8NGY6	317 aa		8.88	□□□□□ -0.99
CPSF7-221	ENST00000543545	FGFBP3	Q8TAT2	258 aa		8.88	□□□□□ -0.99
CPSF7-221	ENST00000543545	CNIH3	Q8TBE1	160 aa		8.88	□□□□□ -0.99
CPSF7-221	ENST00000543545	NABP1	Q96AH0	204 aa		8.88	□□□□□ -0.99
CPSF7-221	ENST00000543545	CNBD2	Q96M20	576 aa		8.88	□□□□□ -0.99
CPSF7-221	ENST00000543545	WDR76	Q9H967	626 aa		8.88	□□□□□ -0.99
CPSF7-221	ENST00000543545	NGB	Q9NPG2	151 aa		8.88	□□□□□ -0.99

Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms