RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 TMEM246Q9BRR3 403 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 LHPPQ9H008 270 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 SLC26A1Q9H2B4 701 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 MOV10Q9HCE1 1003 aaKnown RBP6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 FBXL4Q9UKA2 621 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 A0A087X0M5 115 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 TRGV5A0A0B4J1U4 118 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 A0A1B0GX30 115 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 HMX2A2RU54 273 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 AGAP5A6NIR3 686 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 MASP2O00187 686 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 SNAPC5O75971 98 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 EPHA1P21709 976 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 PIGAP37287 484 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 PCBP4P57723 403 aaKnown RBP6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 HTD2P86397 168 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 PRTGQ2VWP7 1150 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 SYT14P1Q58G82 188 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 NXNL2Q5VZ03 156 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 OR2A2Q6IF42 318 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 ABI3BPQ7Z7G0 1075 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 OR6V1Q8N148 313 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 OR4N2Q8NGD1 307 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 ABHD4Q8TB40 342 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 GLYATL2Q8WU03 294 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 SNAPC3Q92966 411 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 OR11A1Q9GZK7 315 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 WNT5BQ9H1J7 359 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 DUSP15Q9H1R2 295 aaPredicted RBP6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 MS4A5Q9H3V2 200 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 TMEM231Q9H6L2 316 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 PLA2G3Q9NZ20 509 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 ASB1Q9Y576 335 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 HELTA6NFD8 242 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 HMGN4O00479 90 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 PRKNO60260 465 aaPredicted RBP6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 ILKQ13418 452 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 SSPNQ14714 243 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 DHRS4L2Q6PKH6 230 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 DEGS2Q6QHC5 323 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 B3GLCTQ6Y288 498 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 BEST3Q8N1M1 668 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 ZNF431Q8TF32 576 aaPredicted RBP6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 TMEM106AQ96A25 262 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 RASD2Q96D21 266 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 HES7Q9BYE0 225 aa6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 ZNF71Q9NQZ8 489 aaPredicted RBP6.3□□□□□ -1.4
SRGAP1-206ENST00000543397 EP300Q09472 2414 aaPredicted RBP6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 TRIP12Q14669 1992 aaPredicted RBP6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 OR2W5A6NFC9 320 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 TMEM210A6NLX4 147 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 UPK1AO00322 258 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 TOX3O15405 576 aaPredicted RBP6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 AKR7A2O43488 359 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 HSBP1O75506 76 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 UBCP0CG48 685 aaKnown RBP6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 BDKRB2P30411 391 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 KIR2DL1P43626 348 aaPredicted RBP6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 CX3CR1P49238 355 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 NPY4RP50391 375 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 EMP3P54852 163 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 MRPS10P82664 201 aaKnown RBP6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 DUSP8Q13202 625 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 PRAMEF9Q5VWM5 478 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 OR5D18Q8NGL1 313 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 OR6F1Q8NGZ6 308 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 SYNPRQ8TBG9 265 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 MZB1Q8WU39 189 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 ADAMTS14Q8WXS8 1223 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 ZNF582Q96NG8 517 aaPredicted RBP6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 TMEM59Q9BXS4 323 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 TP63Q9H3D4 680 aaPredicted RBP6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 ZNF286AQ9HBT8 521 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 ZNF275Q9NSD4 429 aaPredicted RBP6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 FAIMQ9NVQ4 179 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 PATE3B3GLJ2 98 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 KLK8O60259 260 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 GRPP07492 148 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 DUSP7Q16829 419 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 PRAMEF5Q5TYX0 476 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 PRAMEF6Q5VXH4 476 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 SERPINA12Q8IW75 414 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 SFTPA1Q8IWL2 248 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 SELENOHQ8IZQ5 122 aaKnown RBP6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 CHDHQ8NE62 594 aaPredicted RBP6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 OR14K1Q8NGZ2 314 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 OR1S1Q8NH92 325 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 ZBTB8AQ96BR9 441 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 FAM122AQ96E09 287 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 TEX37Q96LM6 180 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 CLUHP3Q96NS8 147 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 UBQLN3Q9H347 655 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 PLEKHA3Q9HB20 300 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 SDHAF2Q9NX18 166 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 B3GALT5Q9Y2C3 310 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 COA3Q9Y2R0 106 aaPredicted RBP6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 TRPM6Q9BX84 2022 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 LINC01387J3KSC0 135 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 FCMRO60667 390 aa6.29□□□□□ -1.4
SRGAP1-206ENST00000543397 RPLP1P05386 114 aaKnown RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms