RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 MEIOCA2RUB1 952 aa12.63□□□□□ -0.39
LDB3-207ENST00000542786 AGFG1P52594 562 aaKnown RBP12.63□□□□□ -0.39
LDB3-207ENST00000542786 H3F3AP84243 136 aa12.63□□□□□ -0.39
LDB3-207ENST00000542786 TMEM176BQ3YBM2 270 aaPredicted RBP12.63□□□□□ -0.39
LDB3-207ENST00000542786 SLC36A2Q495M3 483 aa12.63□□□□□ -0.39
LDB3-207ENST00000542786 OR7E24Q6IFN5 339 aa12.63□□□□□ -0.39
LDB3-207ENST00000542786 KCTD18Q6PI47 426 aaPredicted RBP12.63□□□□□ -0.39
LDB3-207ENST00000542786 ESPNLQ6ZVH7 1005 aa12.63□□□□□ -0.39
LDB3-207ENST00000542786 GLCCI1Q86VQ1 547 aa12.63□□□□□ -0.39
LDB3-207ENST00000542786 NOXO1Q8NFA2 376 aa12.63□□□□□ -0.39
LDB3-207ENST00000542786 YIPF5Q969M3 257 aa12.63□□□□□ -0.39
LDB3-207ENST00000542786 PPP1R14AQ96A00 147 aa12.63□□□□□ -0.39
LDB3-207ENST00000542786 RFT1Q96AA3 541 aa12.63□□□□□ -0.39
LDB3-207ENST00000542786 THAP7Q9BT49 309 aaPredicted RBP12.63□□□□□ -0.39
LDB3-207ENST00000542786 OR5V1Q9UGF6 321 aa12.63□□□□□ -0.39
LDB3-207ENST00000542786 CAMK2AQ9UQM7 478 aa12.63□□□□□ -0.39
LDB3-207ENST00000542786 R4GN57 208 aa12.63□□□□□ -0.39
LDB3-207ENST00000542786 FRYLO94915 3013 aa12.63□□□□□ -0.39
LDB3-207ENST00000542786 MUC3AQ02505 3323 aa12.63□□□□□ -0.39
LDB3-207ENST00000542786 A0A0G2JMM0 328 aa12.63□□□□□ -0.39
LDB3-207ENST00000542786 A0A1W2PPB8 328 aa12.63□□□□□ -0.39
LDB3-207ENST00000542786 A0A1W2PRS3 328 aa12.63□□□□□ -0.39
LDB3-207ENST00000542786 KIR3DP1A8MWS1 328 aa12.63□□□□□ -0.39
LDB3-207ENST00000542786 TERTO14746 1132 aaKnown RBP12.63□□□□□ -0.39
LDB3-207ENST00000542786 CTDSPLO15194 276 aa12.63□□□□□ -0.39
LDB3-207ENST00000542786 GSTZ1O43708 216 aaPredicted RBP12.63□□□□□ -0.39
LDB3-207ENST00000542786 HPP00738 406 aa12.63□□□□□ -0.39
LDB3-207ENST00000542786 BTCP35070 178 aa12.63□□□□□ -0.39
LDB3-207ENST00000542786 DDOSTP39656 456 aa12.63□□□□□ -0.39
LDB3-207ENST00000542786 EIF2B2P49770 351 aaKnown RBP12.63□□□□□ -0.39
LDB3-207ENST00000542786 MMP15P51511 669 aa12.63□□□□□ -0.39
LDB3-207ENST00000542786 RIDAP52758 137 aaKnown RBP12.63□□□□□ -0.39
LDB3-207ENST00000542786 GPR176Q14439 515 aa12.63□□□□□ -0.39
LDB3-207ENST00000542786 HIST3H3Q16695 136 aa12.63□□□□□ -0.39
LDB3-207ENST00000542786 SLC22A10Q63ZE4 541 aa12.63□□□□□ -0.39
LDB3-207ENST00000542786 TIGD3Q6B0B8 471 aa12.63□□□□□ -0.39
LDB3-207ENST00000542786 SLC25A47Q6Q0C1 308 aa12.63□□□□□ -0.39
LDB3-207ENST00000542786 BAIAP2L2Q6UXY1 529 aa12.63□□□□□ -0.39
LDB3-207ENST00000542786 TMPPEQ6ZT21 453 aa12.63□□□□□ -0.39
LDB3-207ENST00000542786 KRT77Q7Z794 578 aa12.63□□□□□ -0.39
LDB3-207ENST00000542786 GLB1L2Q8IW92 636 aa12.63□□□□□ -0.39
LDB3-207ENST00000542786 UEVLDQ8IX04 471 aa12.63□□□□□ -0.39
LDB3-207ENST00000542786 UBE2J2Q8N2K1 259 aa12.63□□□□□ -0.39
LDB3-207ENST00000542786 OR6X1Q8NH79 312 aa12.63□□□□□ -0.39
LDB3-207ENST00000542786 RNF133Q8WVZ7 376 aa12.63□□□□□ -0.39
LDB3-207ENST00000542786 C11orf40Q8WZ69 217 aa12.63□□□□□ -0.39
LDB3-207ENST00000542786 TMEM106AQ96A25 262 aa12.63□□□□□ -0.39
LDB3-207ENST00000542786 TMEM41AQ96HV5 264 aa12.63□□□□□ -0.39
LDB3-207ENST00000542786 OXGR1Q96P68 337 aa12.63□□□□□ -0.39
LDB3-207ENST00000542786 RNF121Q9H920 327 aa12.63□□□□□ -0.39
LDB3-207ENST00000542786 G6PC2Q9NQR9 355 aa12.63□□□□□ -0.39
LDB3-207ENST00000542786 FOXJ2Q9P0K8 574 aa12.63□□□□□ -0.39
LDB3-207ENST00000542786 FBXL3Q9UKT7 428 aa12.63□□□□□ -0.39
LDB3-207ENST00000542786 KMT2EQ8IZD2 1858 aa12.62□□□□□ -0.39
LDB3-207ENST00000542786 TFECO14948 347 aaPredicted RBP12.62□□□□□ -0.39
LDB3-207ENST00000542786 EEF1E1O43324 174 aaKnown RBP12.62□□□□□ -0.39
LDB3-207ENST00000542786 PMS2P2O95744 297 aa12.62□□□□□ -0.39
LDB3-207ENST00000542786 CALCBP10092 127 aa12.62□□□□□ -0.39
LDB3-207ENST00000542786 PRKAR1AP10644 381 aa12.62□□□□□ -0.39
LDB3-207ENST00000542786 CD37P11049 281 aa12.62□□□□□ -0.39
LDB3-207ENST00000542786 TCN2P20062 427 aa12.62□□□□□ -0.39
LDB3-207ENST00000542786 OTX2P32243 289 aa12.62□□□□□ -0.39
LDB3-207ENST00000542786 SFTPDP35247 375 aa12.62□□□□□ -0.39
LDB3-207ENST00000542786 DSCR4P56555 118 aaPredicted RBP12.62□□□□□ -0.39
LDB3-207ENST00000542786 CLDN20P56880 219 aa12.62□□□□□ -0.39
LDB3-207ENST00000542786 B3GALT5-AS1P59052 145 aa12.62□□□□□ -0.39
LDB3-207ENST00000542786 DGCR2P98153 550 aa12.62□□□□□ -0.39
LDB3-207ENST00000542786 SSPNQ14714 243 aa12.62□□□□□ -0.39
LDB3-207ENST00000542786 HACD4Q5VWC8 232 aa12.62□□□□□ -0.39
LDB3-207ENST00000542786 MZT2BQ6NZ67 158 aa12.62□□□□□ -0.39
LDB3-207ENST00000542786 DEGS2Q6QHC5 323 aa12.62□□□□□ -0.39
LDB3-207ENST00000542786 ZNF227Q86WZ6 799 aa12.62□□□□□ -0.39
LDB3-207ENST00000542786 ZNF433Q8N7K0 673 aaPredicted RBP12.62□□□□□ -0.39
LDB3-207ENST00000542786 OR10S1Q8NGN2 331 aa12.62□□□□□ -0.39
LDB3-207ENST00000542786 OR6F1Q8NGZ6 308 aa12.62□□□□□ -0.39
LDB3-207ENST00000542786 ZNF671Q8TAW3 534 aa12.62□□□□□ -0.39
LDB3-207ENST00000542786 GNRHR2Q96P88 292 aa12.62□□□□□ -0.39
LDB3-207ENST00000542786 ABCG5Q9H222 651 aa12.62□□□□□ -0.39
LDB3-207ENST00000542786 TCF7L1Q9HCS4 588 aa12.62□□□□□ -0.39
LDB3-207ENST00000542786 CYB5R1Q9UHQ9 305 aa12.62□□□□□ -0.39
LDB3-207ENST00000542786 TEKT2Q9UIF3 430 aa12.62□□□□□ -0.39
LDB3-207ENST00000542786 R4GMQ9 66 aa12.62□□□□□ -0.39
LDB3-207ENST00000542786 SDK2Q58EX2 2172 aa12.62□□□□□ -0.39
LDB3-207ENST00000542786 OR2M5A3KFT3 312 aa12.61□□□□□ -0.39
LDB3-207ENST00000542786 TTLL8A6PVC2 850 aa12.61□□□□□ -0.39
LDB3-207ENST00000542786 G3V3Y1 287 aa12.61□□□□□ -0.39
LDB3-207ENST00000542786 TRAPPC2P0DI81 140 aa12.61□□□□□ -0.39
LDB3-207ENST00000542786 TRAPPC2BP0DI82 140 aa12.61□□□□□ -0.39
LDB3-207ENST00000542786 ZNF823P16415 610 aa12.61□□□□□ -0.39
LDB3-207ENST00000542786 ZNF17P17021 662 aa12.61□□□□□ -0.39
LDB3-207ENST00000542786 CLDN12P56749 244 aa12.61□□□□□ -0.39
LDB3-207ENST00000542786 GPR85P60893 370 aa12.61□□□□□ -0.39
LDB3-207ENST00000542786 SLC35A1P78382 337 aa12.61□□□□□ -0.39
LDB3-207ENST00000542786 PLA1AQ53H76 456 aa12.61□□□□□ -0.39
LDB3-207ENST00000542786 THEM4Q5T1C6 240 aa12.61□□□□□ -0.39
LDB3-207ENST00000542786 ZNF544Q6NX49 715 aa12.61□□□□□ -0.39
LDB3-207ENST00000542786 DCXRQ7Z4W1 244 aa12.61□□□□□ -0.39
LDB3-207ENST00000542786 LINC00346Q8IVM7 164 aa12.61□□□□□ -0.39
LDB3-207ENST00000542786 DNAAF1Q8NEP3 725 aa12.61□□□□□ -0.39
LDB3-207ENST00000542786 ENKURQ8TC29 256 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms