RNA–Protein interactions for RNA: ENST00000541953.5

CLSTN3-213, Transcript of calsyntenin 3, humanhuman

TSL 5

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-213ENST00000541953 WNT5BQ9H1J7 359 aa13.07□□□□□ -0.32
CLSTN3-213ENST00000541953 NANOGQ9H9S0 305 aa13.07□□□□□ -0.32
CLSTN3-213ENST00000541953 ZNF69Q9UC07 566 aa13.07□□□□□ -0.32
CLSTN3-213ENST00000541953 GPR160Q9UJ42 338 aa13.07□□□□□ -0.32
CLSTN3-213ENST00000541953 MCIDASD6RGH6 385 aa13.06□□□□□ -0.32
CLSTN3-213ENST00000541953 TRAPPC2LH3BP13 241 aa13.06□□□□□ -0.32
CLSTN3-213ENST00000541953 OR7A10O76100 309 aa13.06□□□□□ -0.32
CLSTN3-213ENST00000541953 SCG5P05408 212 aa13.06□□□□□ -0.32
CLSTN3-213ENST00000541953 TSPAN19P0C672 248 aa13.06□□□□□ -0.32
CLSTN3-213ENST00000541953 PCGF2P35227 344 aa13.06□□□□□ -0.32
CLSTN3-213ENST00000541953 LIMS1P48059 325 aa13.06□□□□□ -0.32
CLSTN3-213ENST00000541953 ZNF84P51523 738 aa13.06□□□□□ -0.32
CLSTN3-213ENST00000541953 MRPS34P82930 218 aaKnown RBP13.06□□□□□ -0.32
CLSTN3-213ENST00000541953 TEKQ02763 1124 aa13.06□□□□□ -0.32
CLSTN3-213ENST00000541953 PLP2Q04941 152 aa13.06□□□□□ -0.32
CLSTN3-213ENST00000541953 MMEL1Q495T6 779 aa13.06□□□□□ -0.32
CLSTN3-213ENST00000541953 FAM209AQ5JX71 171 aa13.06□□□□□ -0.32
CLSTN3-213ENST00000541953 PRR31Q5SQ13 230 aa13.06□□□□□ -0.32
CLSTN3-213ENST00000541953 SLC25A47Q6Q0C1 308 aa13.06□□□□□ -0.32
CLSTN3-213ENST00000541953 DPP10Q8N608 796 aa13.06□□□□□ -0.32
CLSTN3-213ENST00000541953 OR1J2Q8NGS2 313 aa13.06□□□□□ -0.32
CLSTN3-213ENST00000541953 OR10A6Q8NH74 314 aa13.06□□□□□ -0.32
CLSTN3-213ENST00000541953 ABHD4Q8TB40 342 aa13.06□□□□□ -0.32
CLSTN3-213ENST00000541953 RAB1CQ92928 201 aa13.06□□□□□ -0.32
CLSTN3-213ENST00000541953 MPP4Q96JB8 637 aa13.06□□□□□ -0.32
CLSTN3-213ENST00000541953 JMJD8Q96S16 334 aa13.06□□□□□ -0.32
CLSTN3-213ENST00000541953 SLC19A3Q9BZV2 496 aa13.06□□□□□ -0.32
CLSTN3-213ENST00000541953 EVA1AQ9H8M9 152 aa13.06□□□□□ -0.32
CLSTN3-213ENST00000541953 SIAEQ9HAT2 523 aa13.06□□□□□ -0.32
CLSTN3-213ENST00000541953 A0A1W2PRG6 482 aa13.05□□□□□ -0.32
CLSTN3-213ENST00000541953 DNAJC9-AS1A6NH13 148 aa13.05□□□□□ -0.32
CLSTN3-213ENST00000541953 IGHV2-70P01814 119 aa13.05□□□□□ -0.32
CLSTN3-213ENST00000541953 MT-ND1P03886 318 aa13.05□□□□□ -0.32
CLSTN3-213ENST00000541953 HIST1H2ABP04908 130 aa13.05□□□□□ -0.32
CLSTN3-213ENST00000541953 HKR1P10072 659 aa13.05□□□□□ -0.32
CLSTN3-213ENST00000541953 LAP3P28838 519 aa13.05□□□□□ -0.32
CLSTN3-213ENST00000541953 TOP3AQ13472 1001 aaPredicted RBP13.05□□□□□ -0.32
CLSTN3-213ENST00000541953 LAPTM4AQ15012 233 aa13.05□□□□□ -0.32
CLSTN3-213ENST00000541953 SGCAQ16586 387 aa13.05□□□□□ -0.32
CLSTN3-213ENST00000541953 MBNL2Q5VZF2 373 aaKnown RBP13.05□□□□□ -0.32
CLSTN3-213ENST00000541953 HIST3H2AQ7L7L0 130 aa13.05□□□□□ -0.32
CLSTN3-213ENST00000541953 DPPA2Q7Z7J5 298 aa13.05□□□□□ -0.32
CLSTN3-213ENST00000541953 IGFN1Q86VF2 1251 aa13.05□□□□□ -0.32
CLSTN3-213ENST00000541953 HIST1H2ACQ93077 130 aa13.05□□□□□ -0.32
CLSTN3-213ENST00000541953 TIMD4Q96H15 378 aa13.05□□□□□ -0.32
CLSTN3-213ENST00000541953 DCLRE1CQ96SD1 692 aaKnown RBP13.05□□□□□ -0.32
CLSTN3-213ENST00000541953 ZNF747Q9BV97 191 aa13.05□□□□□ -0.32
CLSTN3-213ENST00000541953 INIPQ9NRY2 104 aa13.05□□□□□ -0.32
CLSTN3-213ENST00000541953 KLHL21Q9UJP4 597 aa13.05□□□□□ -0.32
CLSTN3-213ENST00000541953 ENTPD5O75356 428 aa13.04□□□□□ -0.32
CLSTN3-213ENST00000541953 PTHP01270 115 aa13.04□□□□□ -0.32
CLSTN3-213ENST00000541953 ADH4P08319 380 aa13.04□□□□□ -0.32
CLSTN3-213ENST00000541953 ERFP50548 548 aa13.04□□□□□ -0.32
CLSTN3-213ENST00000541953 PPP1CBP62140 327 aa13.04□□□□□ -0.32
CLSTN3-213ENST00000541953 CD47Q08722 323 aa13.04□□□□□ -0.32
CLSTN3-213ENST00000541953 PIN1Q13526 163 aaPredicted RBP13.04□□□□□ -0.32
CLSTN3-213ENST00000541953 ZNF718Q3SXZ3 478 aa13.04□□□□□ -0.32
CLSTN3-213ENST00000541953 BEND6Q5SZJ8 279 aaPredicted RBP13.04□□□□□ -0.32
CLSTN3-213ENST00000541953 OTPQ5XKR4 325 aa13.04□□□□□ -0.32
CLSTN3-213ENST00000541953 ZNF774Q6NX45 483 aa13.04□□□□□ -0.32
CLSTN3-213ENST00000541953 Q6ZR03 302 aa13.04□□□□□ -0.32
CLSTN3-213ENST00000541953 JAZF1Q86VZ6 243 aa13.04□□□□□ -0.32
CLSTN3-213ENST00000541953 LRRC8CQ8TDW0 803 aa13.04□□□□□ -0.32
CLSTN3-213ENST00000541953 SGTBQ96EQ0 304 aa13.04□□□□□ -0.32
CLSTN3-213ENST00000541953 SIGLEC11Q96RL6 698 aa13.04□□□□□ -0.32
CLSTN3-213ENST00000541953 OR2H1Q9GZK4 316 aa13.04□□□□□ -0.32
CLSTN3-213ENST00000541953 LRMDAQ9H2I8 198 aa13.04□□□□□ -0.32
CLSTN3-213ENST00000541953 CCNB1IP1Q9NPC3 277 aa13.04□□□□□ -0.32
CLSTN3-213ENST00000541953 PURGQ9UJV8 347 aaKnown RBP13.04□□□□□ -0.32
CLSTN3-213ENST00000541953 SH3GLB1Q9Y371 365 aa13.04□□□□□ -0.32
CLSTN3-213ENST00000541953 NDUFAF1Q9Y375 327 aa13.04□□□□□ -0.32
CLSTN3-213ENST00000541953 NPTNQ9Y639 398 aa13.04□□□□□ -0.32
CLSTN3-213ENST00000541953 FBP2O00757 339 aa13.03□□□□□ -0.32
CLSTN3-213ENST00000541953 GCH1P30793 250 aa13.03□□□□□ -0.32
CLSTN3-213ENST00000541953 OR1E2P47887 323 aa13.03□□□□□ -0.32
CLSTN3-213ENST00000541953 GDI2P50395 445 aaKnown RBP13.03□□□□□ -0.32
CLSTN3-213ENST00000541953 DAP3P51398 398 aaKnown RBP13.03□□□□□ -0.32
CLSTN3-213ENST00000541953 PSG7Q13046 419 aa13.03□□□□□ -0.32
CLSTN3-213ENST00000541953 FHL1Q13642 323 aa13.03□□□□□ -0.32
CLSTN3-213ENST00000541953 NFYCQ13952 458 aa13.03□□□□□ -0.32
CLSTN3-213ENST00000541953 ENDOGQ14249 297 aaKnown RBP13.03□□□□□ -0.32
CLSTN3-213ENST00000541953 VMACQ2NL98 169 aa13.03□□□□□ -0.32
CLSTN3-213ENST00000541953 RABL3Q5HYI8 236 aa13.03□□□□□ -0.32
CLSTN3-213ENST00000541953 DOK3Q7L591 496 aa13.03□□□□□ -0.32
CLSTN3-213ENST00000541953 PATL1Q86TB9 770 aaKnown RBP13.03□□□□□ -0.32
CLSTN3-213ENST00000541953 TEX29Q8N6K0 151 aa13.03□□□□□ -0.32
CLSTN3-213ENST00000541953 TMEM239Q8WW34 195 aa13.03□□□□□ -0.32
CLSTN3-213ENST00000541953 DDX28Q9NUL7 540 aaKnown RBP13.03□□□□□ -0.32
CLSTN3-213ENST00000541953 EGFL7Q9UHF1 273 aa13.03□□□□□ -0.32
CLSTN3-213ENST00000541953 IGHV3OR16-10A0A075B7F0 116 aa13.02□□□□□ -0.33
CLSTN3-213ENST00000541953 PLSCR5A0PG75 271 aa13.02□□□□□ -0.33
CLSTN3-213ENST00000541953 CENPBD1B2RD01 187 aa13.02□□□□□ -0.33
CLSTN3-213ENST00000541953 H7C1C5 153 aa13.02□□□□□ -0.33
CLSTN3-213ENST00000541953 FXYD1O00168 92 aa13.02□□□□□ -0.33
CLSTN3-213ENST00000541953 MT-ND5P03915 603 aa13.02□□□□□ -0.33
CLSTN3-213ENST00000541953 CD55P08174 381 aa13.02□□□□□ -0.33
CLSTN3-213ENST00000541953 SBK2P0C263 348 aa13.02□□□□□ -0.33
CLSTN3-213ENST00000541953 TAS2R41P59536 307 aa13.02□□□□□ -0.33
CLSTN3-213ENST00000541953 LCN6P62502 163 aa13.02□□□□□ -0.33
CLSTN3-213ENST00000541953 ZNF154Q13106 437 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms