RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 OTPQ5XKR4 325 aa24.59■■□□□ 1.53
CCM2-218ENST00000541586 FCRLAQ7L513 359 aa24.59■■□□□ 1.53
CCM2-218ENST00000541586 DPY19L4Q7Z388 723 aa24.59■■□□□ 1.53
CCM2-218ENST00000541586 ZFP41Q8N8Y5 198 aa24.59■■□□□ 1.53
CCM2-218ENST00000541586 SNX33Q8WV41 574 aa24.59■■□□□ 1.53
CCM2-218ENST00000541586 UFD1Q92890 307 aa24.59■■□□□ 1.53
CCM2-218ENST00000541586 OR2M2Q96R28 347 aa24.59■■□□□ 1.53
CCM2-218ENST00000541586 PRRG4Q9BZD6 226 aa24.59■■□□□ 1.53
CCM2-218ENST00000541586 TP63Q9H3D4 680 aaPredicted RBP24.59■■□□□ 1.53
CCM2-218ENST00000541586 KLHDC2Q9Y2U9 406 aa24.59■■□□□ 1.53
CCM2-218ENST00000541586 A0A1W2PPW3 197 aa24.58■■□□□ 1.53
CCM2-218ENST00000541586 CYTIPO60759 359 aa24.58■■□□□ 1.53
CCM2-218ENST00000541586 PSKH1P11801 424 aa24.58■■□□□ 1.53
CCM2-218ENST00000541586 RPS27P42677 84 aaKnown RBP24.58■■□□□ 1.53
CCM2-218ENST00000541586 VBP1P61758 197 aa24.58■■□□□ 1.53
CCM2-218ENST00000541586 CDONQ4KMG0 1287 aa24.58■■□□□ 1.53
CCM2-218ENST00000541586 RPRMLQ8N4K4 120 aa24.58■■□□□ 1.53
CCM2-218ENST00000541586 NSMAFQ92636 917 aa24.58■■□□□ 1.53
CCM2-218ENST00000541586 PAQR5Q9NXK6 330 aaPredicted RBP24.58■■□□□ 1.53
CCM2-218ENST00000541586 FLVCR1Q9Y5Y0 555 aa24.58■■□□□ 1.53
CCM2-218ENST00000541586 ESPL1Q14674 2120 aa24.58■■□□□ 1.53
CCM2-218ENST00000541586 ZNF462Q96JM2 2506 aa24.58■■□□□ 1.52
CCM2-218ENST00000541586 CENPBD1B2RD01 187 aa24.58■■□□□ 1.52
CCM2-218ENST00000541586 ZNF593O00488 134 aaPredicted RBP24.58■■□□□ 1.52
CCM2-218ENST00000541586 MPZL1O95297 269 aa24.58■■□□□ 1.52
CCM2-218ENST00000541586 BDH1Q02338 343 aa24.58■■□□□ 1.52
CCM2-218ENST00000541586 SPCS2Q15005 226 aa24.58■■□□□ 1.52
CCM2-218ENST00000541586 MEP1BQ16820 701 aa24.58■■□□□ 1.52
CCM2-218ENST00000541586 ACSF3Q4G176 576 aaPredicted RBP24.58■■□□□ 1.52
CCM2-218ENST00000541586 TP53I3Q53FA7 332 aa24.58■■□□□ 1.52
CCM2-218ENST00000541586 VASH1Q7L8A9 365 aaPredicted RBP24.58■■□□□ 1.52
CCM2-218ENST00000541586 ZSCAN2Q7Z7L9 614 aaPredicted RBP24.58■■□□□ 1.52
CCM2-218ENST00000541586 ALDH16A1Q8IZ83 802 aa24.58■■□□□ 1.52
CCM2-218ENST00000541586 SYS1Q8N2H4 156 aa24.58■■□□□ 1.52
CCM2-218ENST00000541586 SLC26A10Q8NG04 563 aa24.58■■□□□ 1.52
CCM2-218ENST00000541586 MNTQ99583 582 aa24.58■■□□□ 1.52
CCM2-218ENST00000541586 DCUN1D5Q9BTE7 237 aa24.58■■□□□ 1.52
CCM2-218ENST00000541586 ZNF432O94892 652 aa24.57■■□□□ 1.52
CCM2-218ENST00000541586 SYNGR4O95473 234 aa24.57■■□□□ 1.52
CCM2-218ENST00000541586 NCS1P62166 190 aa24.57■■□□□ 1.52
CCM2-218ENST00000541586 SF3B4Q15427 424 aaKnown RBP eCLIP24.57■■□□□ 1.52
CCM2-218ENST00000541586 C1orf185Q5T7R7 199 aa24.57■■□□□ 1.52
CCM2-218ENST00000541586 RTL6Q6ICC9 239 aa24.57■■□□□ 1.52
CCM2-218ENST00000541586 P4HA3Q7Z4N8 544 aa24.57■■□□□ 1.52
CCM2-218ENST00000541586 TMEM123Q8N131 208 aa24.57■■□□□ 1.52
CCM2-218ENST00000541586 FNDC9Q8TBE3 224 aa24.57■■□□□ 1.52
CCM2-218ENST00000541586 FNDC8Q8TC99 324 aa24.57■■□□□ 1.52
CCM2-218ENST00000541586 MCHR2Q969V1 340 aa24.57■■□□□ 1.52
CCM2-218ENST00000541586 ZNF775Q96BV0 537 aaPredicted RBP24.57■■□□□ 1.52
CCM2-218ENST00000541586 MRPL48Q96GC5 212 aaKnown RBP24.57■■□□□ 1.52
CCM2-218ENST00000541586 CHCHD6Q9BRQ6 235 aa24.57■■□□□ 1.52
CCM2-218ENST00000541586 TRIM36Q9NQ86 728 aa24.57■■□□□ 1.52
CCM2-218ENST00000541586 LAMP5Q9UJQ1 280 aa24.57■■□□□ 1.52
CCM2-218ENST00000541586 MCTS1Q9ULC4 181 aaKnown RBP24.57■■□□□ 1.52
CCM2-218ENST00000541586 POLEQ07864 2286 aa24.57■■□□□ 1.52
CCM2-218ENST00000541586 PRR32B1ATL7 298 aa24.56■■□□□ 1.52
CCM2-218ENST00000541586 E9PI62 339 aa24.56■■□□□ 1.52
CCM2-218ENST00000541586 SLC22A1O15245 554 aa24.56■■□□□ 1.52
CCM2-218ENST00000541586 GAAP10253 952 aa24.56■■□□□ 1.52
CCM2-218ENST00000541586 ALOX5APP20292 161 aa24.56■■□□□ 1.52
CCM2-218ENST00000541586 ADAM8P78325 824 aa24.56■■□□□ 1.52
CCM2-218ENST00000541586 RASGEF1BQ0VAM2 473 aa24.56■■□□□ 1.52
CCM2-218ENST00000541586 GLB1L2Q8IW92 636 aa24.56■■□□□ 1.52
CCM2-218ENST00000541586 OTOSQ8NHW6 89 aa24.56■■□□□ 1.52
CCM2-218ENST00000541586 ABHD3Q8WU67 409 aa24.56■■□□□ 1.52
CCM2-218ENST00000541586 KCNG2Q9UJ96 466 aa24.56■■□□□ 1.52
CCM2-218ENST00000541586 ING1Q9UK53 422 aaPredicted RBP24.56■■□□□ 1.52
CCM2-218ENST00000541586 TMEM14AQ9Y6G1 99 aa24.56■■□□□ 1.52
CCM2-218ENST00000541586 LOC100506127A0A0U1RQW1 187 aa24.55■■□□□ 1.52
CCM2-218ENST00000541586 LRRTM2O43300 516 aa24.55■■□□□ 1.52
CCM2-218ENST00000541586 TGM6O95932 706 aa24.55■■□□□ 1.52
CCM2-218ENST00000541586 CELP19835 753 aa24.55■■□□□ 1.52
CCM2-218ENST00000541586 PSMA1P25786 263 aaKnown RBP24.55■■□□□ 1.52
CCM2-218ENST00000541586 CA7P43166 264 aa24.55■■□□□ 1.52
CCM2-218ENST00000541586 SELENOPP49908 381 aa24.55■■□□□ 1.52
CCM2-218ENST00000541586 TIMM50Q3ZCQ8 353 aa24.55■■□□□ 1.52
CCM2-218ENST00000541586 ZNF684Q5T5D7 378 aa24.55■■□□□ 1.52
CCM2-218ENST00000541586 LRFN4Q6PJG9 635 aa24.55■■□□□ 1.52
CCM2-218ENST00000541586 SLC25A47Q6Q0C1 308 aa24.55■■□□□ 1.52
CCM2-218ENST00000541586 GLTPQ9NZD2 209 aa24.55■■□□□ 1.52
CCM2-218ENST00000541586 KLHL9Q9P2J3 617 aa24.55■■□□□ 1.52
CCM2-218ENST00000541586 GNG8Q9UK08 70 aa24.55■■□□□ 1.52
CCM2-218ENST00000541586 FAM215AQ9Y5M1 114 aa24.55■■□□□ 1.52
CCM2-218ENST00000541586 SIRT4Q9Y6E7 314 aaPredicted RBP24.55■■□□□ 1.52
CCM2-218ENST00000541586 SLC22A20A6NK97 555 aa24.55■■□□□ 1.52
CCM2-218ENST00000541586 QDPRP09417 244 aa24.55■■□□□ 1.52
CCM2-218ENST00000541586 PTGER4P35408 488 aa24.55■■□□□ 1.52
CCM2-218ENST00000541586 TGFBR1P36897 503 aa24.55■■□□□ 1.52
CCM2-218ENST00000541586 CAPZA2P47755 286 aa24.55■■□□□ 1.52
CCM2-218ENST00000541586 CSNK1A1P48729 337 aa24.55■■□□□ 1.52
CCM2-218ENST00000541586 ENTPD1P49961 510 aa24.55■■□□□ 1.52
CCM2-218ENST00000541586 FJX1Q86VR8 437 aa24.55■■□□□ 1.52
CCM2-218ENST00000541586 TMEM54Q969K7 222 aa24.55■■□□□ 1.52
CCM2-218ENST00000541586 PELI1Q96FA3 418 aa24.55■■□□□ 1.52
CCM2-218ENST00000541586 SF3B6Q9Y3B4 125 aaKnown RBP24.55■■□□□ 1.52
CCM2-218ENST00000541586 PSMD9O00233 223 aa24.54■■□□□ 1.52
CCM2-218ENST00000541586 CCL21O00585 134 aa24.54■■□□□ 1.52
CCM2-218ENST00000541586 GPX5O75715 221 aa24.54■■□□□ 1.52
CCM2-218ENST00000541586 HOXD4P09016 255 aaPredicted RBP24.54■■□□□ 1.52
CCM2-218ENST00000541586 SPARCP09486 303 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms