RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 H3BN98 237 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 CLDN34H7C241 214 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 M0QYV0 167 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 MBTPS2O43462 519 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 PCDH7O60245 1069 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 MAGEC1O60732 1142 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 ANXA9O76027 345 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 GAGE7O76087 117 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 LSM8O95777 96 aaKnown RBP4.76□□□□□ -1.65
DDB1-219ENST00000541513 IFNA2P01563 188 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 SERPINA5P05154 406 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 HBQ1P09105 142 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 FAM157CP0CG43 387 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 GAGE12FP0CL80 117 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 GAGE12GP0CL81 117 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 GAGE12IP0CL82 117 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 HMGA1P17096 107 aaKnown RBP4.76□□□□□ -1.65
DDB1-219ENST00000541513 PI3P19957 117 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 MAGP20916 626 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 HSD11B1P28845 292 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 NUDT1P36639 197 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 CEACAM3P40198 252 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 VHLP40337 213 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 AVPR1BP47901 424 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 HLCSP50747 726 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 P2RY4P51582 365 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 RIDAP52758 137 aaKnown RBP4.76□□□□□ -1.65
DDB1-219ENST00000541513 MLLT10P55197 1068 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 PKNOX1P55347 436 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 ARF6P62330 175 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 VSNL1P62760 191 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 GAGE1Q13065 139 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 GAGE4Q13068 117 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 RIGQ13278 110 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 RBM39Q14498 530 aaKnown RBP4.76□□□□□ -1.65
DDB1-219ENST00000541513 OR4D1Q15615 310 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 INPP5JQ15735 1006 aaPredicted RBP4.76□□□□□ -1.65
DDB1-219ENST00000541513 C5orf64Q2M2E5 130 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 RPEL1Q2QD12 228 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 TMEM35AQ53FP2 167 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 ACTBL2Q562R1 376 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 PIGGQ5H8A4 983 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 DCAF12Q5T6F0 453 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 LINC00336Q6ZUF6 198 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 FCRLAQ7L513 359 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 SMIM15Q7Z3B0 74 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 HSD11B1LQ7Z5J1 315 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 SLC47A2Q86VL8 602 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 CRLF3Q8IUI8 442 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 ZNF100Q8IYN0 542 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 METTL4Q8N3J2 472 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 LMNTD1Q8N9Z9 388 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 RELL2Q8NC24 303 aaPredicted RBP4.76□□□□□ -1.65
DDB1-219ENST00000541513 TMEM35BQ8NCS4 154 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 OR56A4Q8NGH8 313 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 OR6N2Q8NGY6 317 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 ART4Q93070 314 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 MRPL24Q96A35 216 aaKnown RBP4.76□□□□□ -1.65
DDB1-219ENST00000541513 ISOC2Q96AB3 205 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 DNAJC1Q96KC8 554 aaKnown RBP4.76□□□□□ -1.65
DDB1-219ENST00000541513 TRAF4Q9BUZ4 470 aaPredicted RBP4.76□□□□□ -1.65
DDB1-219ENST00000541513 POLDIP3Q9BY77 421 aaKnown RBP4.76□□□□□ -1.65
DDB1-219ENST00000541513 LAT2Q9GZY6 243 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 PPA2Q9H2U2 334 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 FNDC4Q9H6D8 234 aaPredicted RBP4.76□□□□□ -1.65
DDB1-219ENST00000541513 WDR55Q9H6Y2 383 aaPredicted RBP4.76□□□□□ -1.65
DDB1-219ENST00000541513 ZNF334Q9HCZ1 680 aaPredicted RBP4.76□□□□□ -1.65
DDB1-219ENST00000541513 ACP6Q9NPH0 428 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 ASCL3Q9NQ33 180 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 SDR39U1Q9NRG7 319 aaPredicted RBP4.76□□□□□ -1.65
DDB1-219ENST00000541513 DCAF13Q9NV06 445 aaKnown RBP4.76□□□□□ -1.65
DDB1-219ENST00000541513 AURKAIP1Q9NWT8 199 aaPredicted RBP4.76□□□□□ -1.65
DDB1-219ENST00000541513 USE1Q9NZ43 259 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 DHRS7Q9Y394 339 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 GMPPBQ9Y5P6 360 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 DOCK4Q8N1I0 1966 aa4.76□□□□□ -1.65
DDB1-219ENST00000541513 NKX6-3A6NJ46 265 aa4.75□□□□□ -1.65
DDB1-219ENST00000541513 ZNF98A6NK75 572 aa4.75□□□□□ -1.65
DDB1-219ENST00000541513 SLC22A20A6NK97 555 aa4.75□□□□□ -1.65
DDB1-219ENST00000541513 SMIM23A6NLE4 172 aa4.75□□□□□ -1.65
DDB1-219ENST00000541513 NPIPB8E9PQR5 432 aa4.75□□□□□ -1.65
DDB1-219ENST00000541513 PRMT5O14744 637 aaPredicted RBP4.75□□□□□ -1.65
DDB1-219ENST00000541513 CASKO14936 926 aa4.75□□□□□ -1.65
DDB1-219ENST00000541513 ITM2AO43736 263 aa4.75□□□□□ -1.65
DDB1-219ENST00000541513 SLC19A2O60779 497 aa4.75□□□□□ -1.65
DDB1-219ENST00000541513 FAM20BO75063 409 aa4.75□□□□□ -1.65
DDB1-219ENST00000541513 WDR1O75083 606 aa4.75□□□□□ -1.65
DDB1-219ENST00000541513 SC5DO75845 299 aa4.75□□□□□ -1.65
DDB1-219ENST00000541513 SNAP29O95721 258 aa4.75□□□□□ -1.65
DDB1-219ENST00000541513 ACTL6AO96019 429 aa4.75□□□□□ -1.65
DDB1-219ENST00000541513 APOC1P02654 83 aa4.75□□□□□ -1.65
DDB1-219ENST00000541513 GP1BAP07359 652 aa4.75□□□□□ -1.65
DDB1-219ENST00000541513 ZDHHC11BP0C7U3 371 aa4.75□□□□□ -1.65
DDB1-219ENST00000541513 GFAPP14136 432 aa4.75□□□□□ -1.65
DDB1-219ENST00000541513 NPR2P20594 1047 aa4.75□□□□□ -1.65
DDB1-219ENST00000541513 GCAP28676 217 aa4.75□□□□□ -1.65
DDB1-219ENST00000541513 TMED10P49755 219 aaKnown RBP4.75□□□□□ -1.65
DDB1-219ENST00000541513 CDK9P50750 372 aaKnown RBP4.75□□□□□ -1.65
DDB1-219ENST00000541513 CXCR4P61073 352 aa4.75□□□□□ -1.65
DDB1-219ENST00000541513 MADCAM1Q13477 382 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms