RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 TGM3Q08188 693 aa3.63□□□□□ -1.83
YBX3-210ENST00000540975 STX5Q13190 355 aa3.63□□□□□ -1.83
YBX3-210ENST00000540975 SCGB2A2Q13296 93 aa3.63□□□□□ -1.83
YBX3-210ENST00000540975 MAB21L1Q13394 359 aa3.63□□□□□ -1.83
YBX3-210ENST00000540975 SNTB2Q13425 540 aaKnown RBP3.63□□□□□ -1.83
YBX3-210ENST00000540975 IL18Q14116 193 aa3.63□□□□□ -1.83
YBX3-210ENST00000540975 DGCR6Q14129 220 aa3.63□□□□□ -1.83
YBX3-210ENST00000540975 LAGE3Q14657 143 aa3.63□□□□□ -1.83
YBX3-210ENST00000540975 CYTH1Q15438 398 aa3.63□□□□□ -1.83
YBX3-210ENST00000540975 SLC5A12Q1EHB4 618 aa3.63□□□□□ -1.83
YBX3-210ENST00000540975 ZCWPW2Q504Y3 356 aa3.63□□□□□ -1.83
YBX3-210ENST00000540975 CCNJQ5T5M9 372 aa3.63□□□□□ -1.83
YBX3-210ENST00000540975 C1orf146Q5VVC0 180 aa3.63□□□□□ -1.83
YBX3-210ENST00000540975 C1orf94Q6P1W5 598 aa3.63□□□□□ -1.83
YBX3-210ENST00000540975 NDUFAF7Q7L592 441 aa3.63□□□□□ -1.83
YBX3-210ENST00000540975 MISPQ8IVT2 679 aa3.63□□□□□ -1.83
YBX3-210ENST00000540975 STEAP2Q8NFT2 490 aa3.63□□□□□ -1.83
YBX3-210ENST00000540975 OR2T3Q8NH03 318 aa3.63□□□□□ -1.83
YBX3-210ENST00000540975 OR52N1Q8NH53 320 aa3.63□□□□□ -1.83
YBX3-210ENST00000540975 NEIL3Q8TAT5 605 aa3.63□□□□□ -1.83
YBX3-210ENST00000540975 NDNFQ8TB73 568 aa3.63□□□□□ -1.83
YBX3-210ENST00000540975 MARCH1Q8TCQ1 289 aa3.63□□□□□ -1.83
YBX3-210ENST00000540975 MCOLN3Q8TDD5 553 aa3.63□□□□□ -1.83
YBX3-210ENST00000540975 DTD1Q8TEA8 209 aa3.63□□□□□ -1.83
YBX3-210ENST00000540975 NELFBQ8WX92 580 aa3.63□□□□□ -1.83
YBX3-210ENST00000540975 OTUB2Q96DC9 234 aa3.63□□□□□ -1.83
YBX3-210ENST00000540975 DUS3LQ96G46 650 aaKnown RBP3.63□□□□□ -1.83
YBX3-210ENST00000540975 ZNF317Q96PQ6 595 aaPredicted RBP3.63□□□□□ -1.83
YBX3-210ENST00000540975 TBX15Q96SF7 602 aa3.63□□□□□ -1.83
YBX3-210ENST00000540975 C11orf70Q9BRQ4 267 aa3.63□□□□□ -1.83
YBX3-210ENST00000540975 CHRDL1Q9BU40 450 aa3.63□□□□□ -1.83
YBX3-210ENST00000540975 TIPINQ9BVW5 301 aa3.63□□□□□ -1.83
YBX3-210ENST00000540975 BCL2L14Q9BZR8 327 aa3.63□□□□□ -1.83
YBX3-210ENST00000540975 RHOJQ9H4E5 214 aa3.63□□□□□ -1.83
YBX3-210ENST00000540975 METTL8Q9H825 291 aaKnown RBP3.63□□□□□ -1.83
YBX3-210ENST00000540975 C19orf12Q9NSK7 152 aa3.63□□□□□ -1.83
YBX3-210ENST00000540975 RMND1Q9NWS8 449 aa3.63□□□□□ -1.83
YBX3-210ENST00000540975 B3GNT2Q9NY97 397 aa3.63□□□□□ -1.83
YBX3-210ENST00000540975 WSB1Q9Y6I7 421 aa3.63□□□□□ -1.83
YBX3-210ENST00000540975 ATP7AQ04656 1500 aa3.63□□□□□ -1.83
YBX3-210ENST00000540975 MN1Q10571 1320 aaPredicted RBP3.63□□□□□ -1.83
YBX3-210ENST00000540975 AKAP12Q02952 1782 aa3.63□□□□□ -1.83
YBX3-210ENST00000540975 RFX7Q2KHR2 1363 aa3.63□□□□□ -1.83
YBX3-210ENST00000540975 PNPLA6Q8IY17 1366 aa3.63□□□□□ -1.83
YBX3-210ENST00000540975 CD109Q6YHK3 1445 aa3.62□□□□□ -1.83
YBX3-210ENST00000540975 NSD3Q9BZ95 1437 aa3.62□□□□□ -1.83
YBX3-210ENST00000540975 MLH3Q9UHC1 1453 aa3.62□□□□□ -1.83
YBX3-210ENST00000540975 ADGRB3O60242 1522 aa3.62□□□□□ -1.83
YBX3-210ENST00000540975 ZNF98A6NK75 572 aa3.62□□□□□ -1.83
YBX3-210ENST00000540975 PP2D1A8MPX8 630 aa3.62□□□□□ -1.83
YBX3-210ENST00000540975 FAM166BA8MTA8 275 aa3.62□□□□□ -1.83
YBX3-210ENST00000540975 F8WDY8 70 aa3.62□□□□□ -1.83
YBX3-210ENST00000540975 H7C0C1 242 aa3.62□□□□□ -1.83
YBX3-210ENST00000540975 ZNF701M0R085 212 aaPredicted RBP3.62□□□□□ -1.83
YBX3-210ENST00000540975 SULT2B1O00204 365 aa3.62□□□□□ -1.83
YBX3-210ENST00000540975 NOS1APO75052 506 aaPredicted RBP3.62□□□□□ -1.83
YBX3-210ENST00000540975 PLEKHA8P1O95397 391 aa3.62□□□□□ -1.83
YBX3-210ENST00000540975 FAM107AO95990 144 aa3.62□□□□□ -1.83
YBX3-210ENST00000540975 PAEPP09466 180 aa3.62□□□□□ -1.83
YBX3-210ENST00000540975 OR4E1P0C645 316 aa3.62□□□□□ -1.83
YBX3-210ENST00000540975 STAG3L2P0CL84 134 aa3.62□□□□□ -1.83
YBX3-210ENST00000540975 SRMP19623 302 aa3.62□□□□□ -1.83
YBX3-210ENST00000540975 CD40LGP29965 261 aa3.62□□□□□ -1.83
YBX3-210ENST00000540975 HTR1FP30939 366 aa3.62□□□□□ -1.83
YBX3-210ENST00000540975 CDH4P55283 916 aa3.62□□□□□ -1.83
YBX3-210ENST00000540975 AP1S2P56377 157 aa3.62□□□□□ -1.83
YBX3-210ENST00000540975 ATXN7L3Q14CW9 347 aaPredicted RBP3.62□□□□□ -1.83
YBX3-210ENST00000540975 SYPL1Q16563 259 aa3.62□□□□□ -1.83
YBX3-210ENST00000540975 HSDL1Q3SXM5 330 aa3.62□□□□□ -1.83
YBX3-210ENST00000540975 BEX5Q5H9J7 111 aa3.62□□□□□ -1.83
YBX3-210ENST00000540975 HES5Q5TA89 166 aa3.62□□□□□ -1.83
YBX3-210ENST00000540975 ZNF691Q5VV52 312 aa3.62□□□□□ -1.83
YBX3-210ENST00000540975 PMF1Q6P1K2 205 aa3.62□□□□□ -1.83
YBX3-210ENST00000540975 LINC00523Q86TU6 105 aa3.62□□□□□ -1.83
YBX3-210ENST00000540975 ZNF573Q86YE8 665 aa3.62□□□□□ -1.83
YBX3-210ENST00000540975 PLCZ1Q86YW0 608 aa3.62□□□□□ -1.83
YBX3-210ENST00000540975 SELENOHQ8IZQ5 122 aaKnown RBP3.62□□□□□ -1.83
YBX3-210ENST00000540975 TTC29Q8NA56 475 aaPredicted RBP3.62□□□□□ -1.83
YBX3-210ENST00000540975 OR5AU1Q8NGC0 362 aa3.62□□□□□ -1.83
YBX3-210ENST00000540975 OR5M1Q8NGP8 315 aa3.62□□□□□ -1.83
YBX3-210ENST00000540975 ZNF596Q8TC21 504 aa3.62□□□□□ -1.83
YBX3-210ENST00000540975 BLOC1S5Q8TDH9 187 aa3.62□□□□□ -1.83
YBX3-210ENST00000540975 AENQ8WTP8 325 aaKnown RBP3.62□□□□□ -1.83
YBX3-210ENST00000540975 RLN3Q8WXF3 142 aa3.62□□□□□ -1.83
YBX3-210ENST00000540975 NTAN1Q96AB6 310 aa3.62□□□□□ -1.83
YBX3-210ENST00000540975 RASD2Q96D21 266 aa3.62□□□□□ -1.83
YBX3-210ENST00000540975 HPDLQ96IR7 371 aa3.62□□□□□ -1.83
YBX3-210ENST00000540975 C12orf66Q96MD2 445 aa3.62□□□□□ -1.83
YBX3-210ENST00000540975 ZNF578Q96N58 590 aaPredicted RBP3.62□□□□□ -1.83
YBX3-210ENST00000540975 PELOQ9BRX2 385 aaKnown RBP3.62□□□□□ -1.83
YBX3-210ENST00000540975 SPATA16Q9BXB7 569 aa3.62□□□□□ -1.83
YBX3-210ENST00000540975 ACTR8Q9H981 624 aa3.62□□□□□ -1.83
YBX3-210ENST00000540975 PATZ1Q9HBE1 687 aaKnown RBP3.62□□□□□ -1.83
YBX3-210ENST00000540975 C20orf96Q9NUD7 363 aaPredicted RBP3.62□□□□□ -1.83
YBX3-210ENST00000540975 GID8Q9NWU2 228 aa3.62□□□□□ -1.83
YBX3-210ENST00000540975 CMTM6Q9NX76 183 aa3.62□□□□□ -1.83
YBX3-210ENST00000540975 RDH8Q9NYR8 311 aa3.62□□□□□ -1.83
YBX3-210ENST00000540975 PEF1Q9UBV8 284 aaKnown RBP3.62□□□□□ -1.83
YBX3-210ENST00000540975 WARS2Q9UGM6 360 aaKnown RBP3.62□□□□□ -1.83
YBX3-210ENST00000540975 BTNL2Q9UIR0 455 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms