RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 OR2M3Q8NG83 312 aa7.45□□□□□ -1.22
CHD4-208ENST00000540960 OR10G3Q8NGC4 313 aa7.45□□□□□ -1.22
CHD4-208ENST00000540960 GATAD2BQ8WXI9 593 aa7.45□□□□□ -1.22
CHD4-208ENST00000540960 ACOT12Q8WYK0 555 aa7.45□□□□□ -1.22
CHD4-208ENST00000540960 SLC25A36Q96CQ1 311 aa7.45□□□□□ -1.22
CHD4-208ENST00000540960 CEP19Q96LK0 163 aa7.45□□□□□ -1.22
CHD4-208ENST00000540960 ADAD1Q96M93 576 aaKnown RBP7.45□□□□□ -1.22
CHD4-208ENST00000540960 RBP7Q96R05 134 aa7.45□□□□□ -1.22
CHD4-208ENST00000540960 ALG12Q9BV10 488 aa7.45□□□□□ -1.22
CHD4-208ENST00000540960 MRI1Q9BV20 369 aa7.45□□□□□ -1.22
CHD4-208ENST00000540960 NAA50Q9GZZ1 169 aaKnown RBP7.45□□□□□ -1.22
CHD4-208ENST00000540960 ADGRL4Q9HBW9 690 aa7.45□□□□□ -1.22
CHD4-208ENST00000540960 SLC24A3Q9HC58 644 aa7.45□□□□□ -1.22
CHD4-208ENST00000540960 TIGARQ9NQ88 270 aa7.45□□□□□ -1.22
CHD4-208ENST00000540960 RABL2AQ9UBK7 228 aaPredicted RBP7.45□□□□□ -1.22
CHD4-208ENST00000540960 IL20RAQ9UHF4 553 aa7.45□□□□□ -1.22
CHD4-208ENST00000540960 CLEC2DQ9UHP7 191 aa7.45□□□□□ -1.22
CHD4-208ENST00000540960 BOKQ9UMX3 212 aaPredicted RBP7.45□□□□□ -1.22
CHD4-208ENST00000540960 RABL2BQ9UNT1 228 aa7.45□□□□□ -1.22
CHD4-208ENST00000540960 RASD1Q9Y272 281 aa7.45□□□□□ -1.22
CHD4-208ENST00000540960 CHCHD2Q9Y6H1 151 aaPredicted RBP7.45□□□□□ -1.22
CHD4-208ENST00000540960 CR1P17927 2039 aa7.45□□□□□ -1.22
CHD4-208ENST00000540960 TEX13CA0A0J9YWL9 993 aa7.44□□□□□ -1.22
CHD4-208ENST00000540960 PRSS37A4D1T9 235 aa7.44□□□□□ -1.22
CHD4-208ENST00000540960 CCDC182A6NF36 153 aa7.44□□□□□ -1.22
CHD4-208ENST00000540960 LIPT2A6NK58 231 aa7.44□□□□□ -1.22
CHD4-208ENST00000540960 FAM183AA6NL82 134 aa7.44□□□□□ -1.22
CHD4-208ENST00000540960 VGLL3A8MV65 326 aa7.44□□□□□ -1.22
CHD4-208ENST00000540960 LOC110117498-PIK3R3F6TDL0 507 aa7.44□□□□□ -1.22
CHD4-208ENST00000540960 PLPP2O43688 288 aa7.44□□□□□ -1.22
CHD4-208ENST00000540960 RGS9O75916 674 aaPredicted RBP7.44□□□□□ -1.22
CHD4-208ENST00000540960 SLC2A10O95528 541 aa7.44□□□□□ -1.22
CHD4-208ENST00000540960 PMS2P2O95744 297 aa7.44□□□□□ -1.22
CHD4-208ENST00000540960 KRT8P05787 483 aa7.44□□□□□ -1.22
CHD4-208ENST00000540960 AHCYP23526 432 aa7.44□□□□□ -1.22
CHD4-208ENST00000540960 MYL9P24844 172 aa7.44□□□□□ -1.22
CHD4-208ENST00000540960 MAPK3P27361 379 aaPredicted RBP7.44□□□□□ -1.22
CHD4-208ENST00000540960 DPP4P27487 766 aa7.44□□□□□ -1.22
CHD4-208ENST00000540960 CFPP27918 469 aa7.44□□□□□ -1.22
CHD4-208ENST00000540960 CD40LGP29965 261 aa7.44□□□□□ -1.22
CHD4-208ENST00000540960 SRD5A2P31213 254 aa7.44□□□□□ -1.22
CHD4-208ENST00000540960 PSMD7P51665 324 aa7.44□□□□□ -1.22
CHD4-208ENST00000540960 GPR85P60893 370 aa7.44□□□□□ -1.22
CHD4-208ENST00000540960 TOMM34Q15785 309 aaPredicted RBP7.44□□□□□ -1.22
CHD4-208ENST00000540960 SPANXN2Q5MJ10 180 aa7.44□□□□□ -1.22
CHD4-208ENST00000540960 ACER2Q5QJU3 275 aa7.44□□□□□ -1.22
CHD4-208ENST00000540960 ZNF362Q5T0B9 420 aaPredicted RBP7.44□□□□□ -1.22
CHD4-208ENST00000540960 EEF1A1P5Q5VTE0 462 aa7.44□□□□□ -1.22
CHD4-208ENST00000540960 LIPKQ5VXJ0 399 aa7.44□□□□□ -1.22
CHD4-208ENST00000540960 IL20RBQ6UXL0 311 aa7.44□□□□□ -1.22
CHD4-208ENST00000540960 LHFPL3Q86UP9 236 aa7.44□□□□□ -1.22
CHD4-208ENST00000540960 SIAH3Q8IW03 269 aa7.44□□□□□ -1.22
CHD4-208ENST00000540960 UEVLDQ8IX04 471 aa7.44□□□□□ -1.22
CHD4-208ENST00000540960 SIRT6Q8N6T7 355 aa7.44□□□□□ -1.22
CHD4-208ENST00000540960 LRRC17Q8N6Y2 441 aa7.44□□□□□ -1.22
CHD4-208ENST00000540960 SDR9C7Q8NEX9 313 aa7.44□□□□□ -1.22
CHD4-208ENST00000540960 OR4F15Q8NGB8 312 aa7.44□□□□□ -1.22
CHD4-208ENST00000540960 OR6Q1Q8NGQ2 317 aa7.44□□□□□ -1.22
CHD4-208ENST00000540960 OR6K6Q8NGW6 343 aa7.44□□□□□ -1.22
CHD4-208ENST00000540960 TBC1D15Q8TC07 691 aa7.44□□□□□ -1.22
CHD4-208ENST00000540960 SPRYD4Q8WW59 207 aaPredicted RBP7.44□□□□□ -1.22
CHD4-208ENST00000540960 ROBO4Q8WZ75 1007 aa7.44□□□□□ -1.22
CHD4-208ENST00000540960 INTS12Q96CB8 462 aaKnown RBP7.44□□□□□ -1.22
CHD4-208ENST00000540960 KCTD12Q96CX2 325 aaKnown RBP7.44□□□□□ -1.22
CHD4-208ENST00000540960 MOGAT1Q96PD6 335 aa7.44□□□□□ -1.22
CHD4-208ENST00000540960 NMNAT3Q96T66 252 aa7.44□□□□□ -1.22
CHD4-208ENST00000540960 DDOQ99489 341 aa7.44□□□□□ -1.22
CHD4-208ENST00000540960 SH3GL3Q99963 347 aa7.44□□□□□ -1.22
CHD4-208ENST00000540960 UTP23Q9BRU9 249 aaKnown RBP7.44□□□□□ -1.22
CHD4-208ENST00000540960 TTYH2Q9BSA4 534 aa7.44□□□□□ -1.22
CHD4-208ENST00000540960 HES7Q9BYE0 225 aa7.44□□□□□ -1.22
CHD4-208ENST00000540960 NXF2Q9GZY0 626 aaKnown RBP7.44□□□□□ -1.22
CHD4-208ENST00000540960 LIN28AQ9H9Z2 209 aaKnown RBP7.44□□□□□ -1.22
CHD4-208ENST00000540960 KLHL1Q9NR64 748 aa7.44□□□□□ -1.22
CHD4-208ENST00000540960 VSX1Q9NZR4 365 aaPredicted RBP7.44□□□□□ -1.22
CHD4-208ENST00000540960 MED11Q9P086 117 aa7.44□□□□□ -1.22
CHD4-208ENST00000540960 DKKL1Q9UK85 242 aa7.44□□□□□ -1.22
CHD4-208ENST00000540960 DNAJC13O75165 2243 aa7.43□□□□□ -1.22
CHD4-208ENST00000540960 IQCMA0A1B0GVH7 501 aa7.43□□□□□ -1.22
CHD4-208ENST00000540960 ISPDA4D126 451 aa7.43□□□□□ -1.22
CHD4-208ENST00000540960 ANKRD61A6NGH8 418 aa7.43□□□□□ -1.22
CHD4-208ENST00000540960 ZNF726A6NNF4 738 aa7.43□□□□□ -1.22
CHD4-208ENST00000540960 ZNF879B4DU55 563 aa7.43□□□□□ -1.22
CHD4-208ENST00000540960 FTCDNL1E5RQL4 147 aa7.43□□□□□ -1.22
CHD4-208ENST00000540960 PRRG2O14669 202 aa7.43□□□□□ -1.22
CHD4-208ENST00000540960 PDCD5O14737 125 aa7.43□□□□□ -1.22
CHD4-208ENST00000540960 ZNF254O75437 659 aa7.43□□□□□ -1.22
CHD4-208ENST00000540960 KHDRBS3O75525 346 aaKnown RBP7.43□□□□□ -1.22
CHD4-208ENST00000540960 CNOT4O95628 575 aaKnown RBP7.43□□□□□ -1.22
CHD4-208ENST00000540960 HRGP04196 525 aa7.43□□□□□ -1.22
CHD4-208ENST00000540960 ZNF823P16415 610 aa7.43□□□□□ -1.22
CHD4-208ENST00000540960 CELP19835 753 aa7.43□□□□□ -1.22
CHD4-208ENST00000540960 CNR1P21554 472 aa7.43□□□□□ -1.22
CHD4-208ENST00000540960 PTBP1P26599 531 aaKnown RBP eCLIP7.43□□□□□ -1.221e-7■□□□□ 9.8
CHD4-208ENST00000540960 ACVR1BP36896 505 aa7.43□□□□□ -1.22
CHD4-208ENST00000540960 CRYBB2P43320 205 aa7.43□□□□□ -1.22
CHD4-208ENST00000540960 MTNR1BP49286 362 aa7.43□□□□□ -1.22
CHD4-208ENST00000540960 NCS1P62166 190 aa7.43□□□□□ -1.22
CHD4-208ENST00000540960 RAC1P63000 192 aa7.43□□□□□ -1.22
CHD4-208ENST00000540960 SIRPAP78324 504 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms