RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 IPCEF1Q8WWN9 437 aaPredicted RBP10.57□□□□□ -0.72
COPS7A-211ENST00000540408 POM121L2Q96KW2 1035 aa10.57□□□□□ -0.72
COPS7A-211ENST00000540408 DCLRE1CQ96SD1 692 aaKnown RBP10.57□□□□□ -0.72
COPS7A-211ENST00000540408 OR2J1Q9GZK6 312 aa10.57□□□□□ -0.72
COPS7A-211ENST00000540408 RABEP2Q9H5N1 569 aa10.57□□□□□ -0.72
COPS7A-211ENST00000540408 IKZF5Q9H5V7 419 aa10.57□□□□□ -0.72
COPS7A-211ENST00000540408 SMURF2Q9HAU4 748 aa10.57□□□□□ -0.72
COPS7A-211ENST00000540408 INIPQ9NRY2 104 aa10.57□□□□□ -0.72
COPS7A-211ENST00000540408 LEF1Q9UJU2 399 aaPredicted RBP10.57□□□□□ -0.72
COPS7A-211ENST00000540408 PURGQ9UJV8 347 aaKnown RBP10.57□□□□□ -0.72
COPS7A-211ENST00000540408 MT-ND1P03886 318 aa10.56□□□□□ -0.72
COPS7A-211ENST00000540408 THY1P04216 161 aa10.56□□□□□ -0.72
COPS7A-211ENST00000540408 CD55P08174 381 aa10.56□□□□□ -0.72
COPS7A-211ENST00000540408 TNFRSF1AP19438 455 aa10.56□□□□□ -0.72
COPS7A-211ENST00000540408 CDAP32320 146 aa10.56□□□□□ -0.72
COPS7A-211ENST00000540408 MPV17P39210 176 aa10.56□□□□□ -0.72
COPS7A-211ENST00000540408 WNT5AP41221 380 aa10.56□□□□□ -0.72
COPS7A-211ENST00000540408 ZNF133P52736 654 aaPredicted RBP10.56□□□□□ -0.72
COPS7A-211ENST00000540408 UGT2B15P54855 530 aa10.56□□□□□ -0.72
COPS7A-211ENST00000540408 PCBP3P57721 371 aaKnown RBP10.56□□□□□ -0.72
COPS7A-211ENST00000540408 PCBD1P61457 104 aa10.56□□□□□ -0.72
COPS7A-211ENST00000540408 PPP1CBP62140 327 aa10.56□□□□□ -0.72
COPS7A-211ENST00000540408 DEFA6Q01524 100 aa10.56□□□□□ -0.72
COPS7A-211ENST00000540408 RPL18Q07020 188 aaKnown RBP10.56□□□□□ -0.72
COPS7A-211ENST00000540408 CD47Q08722 323 aa10.56□□□□□ -0.72
COPS7A-211ENST00000540408 ZNF154Q13106 437 aa10.56□□□□□ -0.72
COPS7A-211ENST00000540408 TAF11Q15544 211 aa10.56□□□□□ -0.72
COPS7A-211ENST00000540408 PDLIM3Q53GG5 364 aaPredicted RBP10.56□□□□□ -0.72
COPS7A-211ENST00000540408 RUNDC3AQ59EK9 446 aa10.56□□□□□ -0.72
COPS7A-211ENST00000540408 INTS11Q5TA45 600 aaKnown RBP10.56□□□□□ -0.72
COPS7A-211ENST00000540408 RBM45Q8IUH3 476 aaKnown RBP10.56□□□□□ -0.72
COPS7A-211ENST00000540408 AKR7LQ8NHP1 331 aa10.56□□□□□ -0.72
COPS7A-211ENST00000540408 ASB10Q8WXI3 467 aa10.56□□□□□ -0.72
COPS7A-211ENST00000540408 LRRC58Q96CX6 371 aa10.56□□□□□ -0.72
COPS7A-211ENST00000540408 DUX5Q96PT3 197 aa10.56□□□□□ -0.72
COPS7A-211ENST00000540408 RBP7Q96R05 134 aa10.56□□□□□ -0.72
COPS7A-211ENST00000540408 SEPHS2Q99611 448 aa10.56□□□□□ -0.72
COPS7A-211ENST00000540408 CCDC28BQ9BUN5 200 aa10.56□□□□□ -0.72
COPS7A-211ENST00000540408 ZNF426Q9BUY5 554 aa10.56□□□□□ -0.72
COPS7A-211ENST00000540408 MS4A7Q9GZW8 240 aaPredicted RBP10.56□□□□□ -0.72
COPS7A-211ENST00000540408 UNKLQ9H9P5 680 aaKnown RBP10.56□□□□□ -0.72
COPS7A-211ENST00000540408 EGFL7Q9UHF1 273 aa10.56□□□□□ -0.72
COPS7A-211ENST00000540408 TIMM10BQ9Y5J6 103 aa10.56□□□□□ -0.72
COPS7A-211ENST00000540408 WNK2Q9Y3S1 2297 aa10.55□□□□□ -0.72
COPS7A-211ENST00000540408 DNAJC9-AS1A6NH13 148 aa10.55□□□□□ -0.72
COPS7A-211ENST00000540408 ZSCAN5BA6NJL1 495 aa10.55□□□□□ -0.72
COPS7A-211ENST00000540408 TIMM8AO60220 97 aaPredicted RBP10.55□□□□□ -0.72
COPS7A-211ENST00000540408 OR7A10O76100 309 aa10.55□□□□□ -0.72
COPS7A-211ENST00000540408 LYPD3O95274 346 aa10.55□□□□□ -0.72
COPS7A-211ENST00000540408 SLC2A10O95528 541 aa10.55□□□□□ -0.72
COPS7A-211ENST00000540408 IGHMP01871 453 aa10.55□□□□□ -0.72
COPS7A-211ENST00000540408 GSTM3P21266 225 aa10.55□□□□□ -0.72
COPS7A-211ENST00000540408 ZFP36P26651 326 aaKnown RBP10.55□□□□□ -0.72
COPS7A-211ENST00000540408 AQP2P41181 271 aa10.55□□□□□ -0.72
COPS7A-211ENST00000540408 RBM34P42696 430 aaKnown RBP10.55□□□□□ -0.72
COPS7A-211ENST00000540408 MTNR1AP48039 350 aa10.55□□□□□ -0.72
COPS7A-211ENST00000540408 IDH3AP50213 366 aa10.55□□□□□ -0.72
COPS7A-211ENST00000540408 ERVK-25P63136 954 aa10.55□□□□□ -0.72
COPS7A-211ENST00000540408 PSG4Q00888 419 aa10.55□□□□□ -0.72
COPS7A-211ENST00000540408 MTX3Q5HYI7 312 aa10.55□□□□□ -0.72
COPS7A-211ENST00000540408 FAM27BQ5VT28 67 aa10.55□□□□□ -0.72
COPS7A-211ENST00000540408 DLEU7Q6UYE1 221 aa10.55□□□□□ -0.72
COPS7A-211ENST00000540408 PTOV1Q86YD1 416 aa10.55□□□□□ -0.72
COPS7A-211ENST00000540408 DEFB108BQ8NET1 73 aa10.55□□□□□ -0.72
COPS7A-211ENST00000540408 GPR32P1Q8NGA4 272 aa10.55□□□□□ -0.72
COPS7A-211ENST00000540408 FNDC8Q8TC99 324 aa10.55□□□□□ -0.72
COPS7A-211ENST00000540408 GEMIN6Q8WXD5 167 aaKnown RBP10.55□□□□□ -0.72
COPS7A-211ENST00000540408 NSMAFQ92636 917 aa10.55□□□□□ -0.72
COPS7A-211ENST00000540408 SGTBQ96EQ0 304 aa10.55□□□□□ -0.72
COPS7A-211ENST00000540408 C7orf26Q96N11 449 aa10.55□□□□□ -0.72
COPS7A-211ENST00000540408 CPPED1Q9BRF8 314 aaPredicted RBP10.55□□□□□ -0.72
COPS7A-211ENST00000540408 PCDHAC1Q9H158 963 aa10.55□□□□□ -0.72
COPS7A-211ENST00000540408 NANOGQ9H9S0 305 aa10.55□□□□□ -0.72
COPS7A-211ENST00000540408 PATZ1Q9HBE1 687 aaKnown RBP10.55□□□□□ -0.72
COPS7A-211ENST00000540408 MSL2Q9HCI7 577 aa10.55□□□□□ -0.72
COPS7A-211ENST00000540408 MEPEQ9NQ76 525 aaPredicted RBP10.55□□□□□ -0.72
COPS7A-211ENST00000540408 MMP26Q9NRE1 261 aa10.55□□□□□ -0.72
COPS7A-211ENST00000540408 TMEM106BQ9NUM4 274 aa10.55□□□□□ -0.72
COPS7A-211ENST00000540408 ZNF69Q9UC07 566 aa10.55□□□□□ -0.72
COPS7A-211ENST00000540408 KLHL21Q9UJP4 597 aa10.55□□□□□ -0.72
COPS7A-211ENST00000540408 POLR3KQ9Y2Y1 108 aaPredicted RBP10.55□□□□□ -0.72
COPS7A-211ENST00000540408 NDUFAF1Q9Y375 327 aa10.55□□□□□ -0.72
COPS7A-211ENST00000540408 MGAM2Q2M2H8 2515 aa10.55□□□□□ -0.72
COPS7A-211ENST00000540408 LOC100509620A0A075B734 347 aa10.54□□□□□ -0.72
COPS7A-211ENST00000540408 ANGPT2O15123 496 aa10.54□□□□□ -0.72
COPS7A-211ENST00000540408 SURF4O15260 269 aa10.54□□□□□ -0.72
COPS7A-211ENST00000540408 ERLIN1O75477 346 aa10.54□□□□□ -0.72
COPS7A-211ENST00000540408 IGF2P01344 180 aa10.54□□□□□ -0.72
COPS7A-211ENST00000540408 IGHV2-70P01814 119 aa10.54□□□□□ -0.72
COPS7A-211ENST00000540408 RNASE1P07998 156 aaKnown RBP10.54□□□□□ -0.72
COPS7A-211ENST00000540408 CST2P09228 141 aa10.54□□□□□ -0.72
COPS7A-211ENST00000540408 TUBG1P23258 451 aa10.54□□□□□ -0.72
COPS7A-211ENST00000540408 SLC6A9P48067 706 aa10.54□□□□□ -0.72
COPS7A-211ENST00000540408 TAS2R41P59536 307 aa10.54□□□□□ -0.72
COPS7A-211ENST00000540408 TMEM155Q4W5P6 130 aa10.54□□□□□ -0.72
COPS7A-211ENST00000540408 ESCO2Q56NI9 601 aa10.54□□□□□ -0.72
COPS7A-211ENST00000540408 DHDDSQ86SQ9 333 aa10.54□□□□□ -0.72
COPS7A-211ENST00000540408 OR4D11Q8NGI4 311 aa10.54□□□□□ -0.72
COPS7A-211ENST00000540408 LRRC8CQ8TDW0 803 aa10.54□□□□□ -0.72
COPS7A-211ENST00000540408 C4orf45Q96LM5 186 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms