RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 PCED1AQ9H1Q7 454 aa9.09□□□□□ -0.95
TRAF1-202ENST00000540010 EHFQ9NZC4 300 aa9.09□□□□□ -0.95
TRAF1-202ENST00000540010 FANCMQ8IYD8 2048 aa9.09□□□□□ -0.95
TRAF1-202ENST00000540010 SCN2AQ99250 2005 aa9.09□□□□□ -0.95
TRAF1-202ENST00000540010 FAM230AA0A1W2PPH8 454 aa9.09□□□□□ -0.95
TRAF1-202ENST00000540010 TMEM212A6NML5 194 aa9.09□□□□□ -0.95
TRAF1-202ENST00000540010 TP53I11O14683 189 aa9.09□□□□□ -0.95
TRAF1-202ENST00000540010 DUX1O43812 170 aa9.09□□□□□ -0.95
TRAF1-202ENST00000540010 MAGEB1P43366 347 aa9.09□□□□□ -0.95
TRAF1-202ENST00000540010 NXPH1P58417 271 aa9.09□□□□□ -0.95
TRAF1-202ENST00000540010 MEF2DQ14814 521 aa9.09□□□□□ -0.95
TRAF1-202ENST00000540010 DMRTC1Q5HYR2 192 aa9.09□□□□□ -0.95
TRAF1-202ENST00000540010 OR51Q1Q8NH59 317 aa9.09□□□□□ -0.95
TRAF1-202ENST00000540010 FNDC9Q8TBE3 224 aa9.09□□□□□ -0.95
TRAF1-202ENST00000540010 ST8SIA4Q92187 359 aa9.09□□□□□ -0.95
TRAF1-202ENST00000540010 CHRDQ9H2X0 955 aa9.09□□□□□ -0.95
TRAF1-202ENST00000540010 A0A1W2PR77 199 aa9.09□□□□□ -0.95
TRAF1-202ENST00000540010 LILRA5A6NI73 299 aa9.09□□□□□ -0.95
TRAF1-202ENST00000540010 P2RY10O00398 339 aa9.09□□□□□ -0.95
TRAF1-202ENST00000540010 MED6O75586 246 aa9.09□□□□□ -0.95
TRAF1-202ENST00000540010 CNOT4O95628 575 aaKnown RBP9.09□□□□□ -0.95
TRAF1-202ENST00000540010 SLC35E2P0CK97 266 aa9.09□□□□□ -0.95
TRAF1-202ENST00000540010 CBR1P16152 277 aa9.09□□□□□ -0.95
TRAF1-202ENST00000540010 NME2P22392 152 aa9.09□□□□□ -0.95
TRAF1-202ENST00000540010 SEC61A1P61619 476 aaKnown RBP9.09□□□□□ -0.95
TRAF1-202ENST00000540010 SRSF5Q13243 272 aaKnown RBP9.09□□□□□ -0.95
TRAF1-202ENST00000540010 YIF1BQ5BJH7 314 aa9.09□□□□□ -0.95
TRAF1-202ENST00000540010 CLVS2Q5SYC1 327 aa9.09□□□□□ -0.95
TRAF1-202ENST00000540010 LAIR2Q6ISS4 152 aa9.09□□□□□ -0.95
TRAF1-202ENST00000540010 C3orf33Q6P1S2 294 aa9.09□□□□□ -0.95
TRAF1-202ENST00000540010 TMUB2Q71RG4 321 aa9.09□□□□□ -0.95
TRAF1-202ENST00000540010 SLC51BQ86UW2 128 aa9.09□□□□□ -0.95
TRAF1-202ENST00000540010 DEFB123Q8N688 67 aa9.09□□□□□ -0.95
TRAF1-202ENST00000540010 PXT1Q8NFP0 134 aa9.09□□□□□ -0.95
TRAF1-202ENST00000540010 OR52B4Q8NGK2 314 aa9.09□□□□□ -0.95
TRAF1-202ENST00000540010 OR4Q3Q8NH05 313 aa9.09□□□□□ -0.95
TRAF1-202ENST00000540010 SENP5Q96HI0 755 aaPredicted RBP9.09□□□□□ -0.95
TRAF1-202ENST00000540010 ST6GAL2Q96JF0 529 aa9.09□□□□□ -0.95
TRAF1-202ENST00000540010 ZNF416Q9BWM5 594 aa9.09□□□□□ -0.95
TRAF1-202ENST00000540010 C19orf25Q9UFG5 118 aaPredicted RBP9.09□□□□□ -0.95
TRAF1-202ENST00000540010 KCND3Q9UK17 655 aa9.09□□□□□ -0.95
TRAF1-202ENST00000540010 hCG_1807616A0A1W2PRN6 198 aa9.08□□□□□ -0.96
TRAF1-202ENST00000540010 CYR61O00622 381 aa9.08□□□□□ -0.96
TRAF1-202ENST00000540010 GPR171O14626 319 aa9.08□□□□□ -0.96
TRAF1-202ENST00000540010 MYF5P13349 255 aa9.08□□□□□ -0.96
TRAF1-202ENST00000540010 SLC6A8P48029 635 aa9.08□□□□□ -0.96
TRAF1-202ENST00000540010 ARF1P84077 181 aaKnown RBP9.08□□□□□ -0.96
TRAF1-202ENST00000540010 TAGLNQ01995 201 aaKnown RBP9.08□□□□□ -0.96
TRAF1-202ENST00000540010 ZNF628Q5EBL2 1059 aa9.08□□□□□ -0.96
TRAF1-202ENST00000540010 FAM74A1Q5RGS3 127 aa9.08□□□□□ -0.96
TRAF1-202ENST00000540010 DPY19L2P2Q6ZN68 376 aa9.08□□□□□ -0.96
TRAF1-202ENST00000540010 PLXDC1Q8IUK5 500 aa9.08□□□□□ -0.96
TRAF1-202ENST00000540010 OR4K15Q8NH41 348 aa9.08□□□□□ -0.96
TRAF1-202ENST00000540010 PFDN5Q99471 154 aa9.08□□□□□ -0.96
TRAF1-202ENST00000540010 ZNF304Q9HCX3 659 aa9.08□□□□□ -0.96
TRAF1-202ENST00000540010 FGF20Q9NP95 211 aaPredicted RBP9.08□□□□□ -0.96
TRAF1-202ENST00000540010 KCNS2Q9ULS6 477 aa9.08□□□□□ -0.96
TRAF1-202ENST00000540010 GPR55Q9Y2T6 319 aaPredicted RBP9.08□□□□□ -0.96
TRAF1-202ENST00000540010 ZDBF2Q9HCK1 2354 aa9.08□□□□□ -0.96
TRAF1-202ENST00000540010 UNC13CQ8NB66 2214 aa9.08□□□□□ -0.96
TRAF1-202ENST00000540010 IGHV5-51A0A0C4DH38 117 aa9.08□□□□□ -0.96
TRAF1-202ENST00000540010 A0A0D9SG52 128 aa9.08□□□□□ -0.96
TRAF1-202ENST00000540010 GGT3PA6NGU5 568 aa9.08□□□□□ -0.96
TRAF1-202ENST00000540010 PIAS2O75928 621 aa9.08□□□□□ -0.96
TRAF1-202ENST00000540010 NTN1O95631 604 aa9.08□□□□□ -0.96
TRAF1-202ENST00000540010 CAPZA1P52907 286 aa9.08□□□□□ -0.96
TRAF1-202ENST00000540010 CAMK2DQ13557 499 aa9.08□□□□□ -0.96
TRAF1-202ENST00000540010 EBPQ15125 230 aaKnown RBP9.08□□□□□ -0.96
TRAF1-202ENST00000540010 ARHGAP11BQ3KRB8 267 aa9.08□□□□□ -0.96
TRAF1-202ENST00000540010 SLC36A2Q495M3 483 aa9.08□□□□□ -0.96
TRAF1-202ENST00000540010 ZBTB44Q8NCP5 570 aa9.08□□□□□ -0.96
TRAF1-202ENST00000540010 FGGYQ96C11 551 aa9.08□□□□□ -0.96
TRAF1-202ENST00000540010 SGCZQ96LD1 299 aa9.08□□□□□ -0.96
TRAF1-202ENST00000540010 WDR76Q9H967 626 aa9.08□□□□□ -0.96
TRAF1-202ENST00000540010 MCCC2Q9HCC0 563 aa9.08□□□□□ -0.96
TRAF1-202ENST00000540010 HRASLSQ9HDD0 168 aa9.08□□□□□ -0.96
TRAF1-202ENST00000540010 FBXL4Q9UKA2 621 aa9.08□□□□□ -0.96
TRAF1-202ENST00000540010 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.08□□□□□ -0.96
TRAF1-202ENST00000540010 ARRDC5A6NEK1 342 aa9.08□□□□□ -0.96
TRAF1-202ENST00000540010 SGCEO43556 437 aa9.08□□□□□ -0.96
TRAF1-202ENST00000540010 GLCEO94923 617 aa9.08□□□□□ -0.96
TRAF1-202ENST00000540010 DIRAS3O95661 229 aa9.08□□□□□ -0.96
TRAF1-202ENST00000540010 TAS2R20P59543 309 aa9.08□□□□□ -0.96
TRAF1-202ENST00000540010 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.08□□□□□ -0.96
TRAF1-202ENST00000540010 ZBTB37Q5TC79 503 aa9.08□□□□□ -0.96
TRAF1-202ENST00000540010 C12orf73Q69YU5 71 aa9.08□□□□□ -0.96
TRAF1-202ENST00000540010 SHISA5Q8N114 240 aa9.08□□□□□ -0.96
TRAF1-202ENST00000540010 PRR18Q8N4B5 295 aa9.08□□□□□ -0.96
TRAF1-202ENST00000540010 HAVCR2Q8TDQ0 301 aa9.08□□□□□ -0.96
TRAF1-202ENST00000540010 ST8SIA2Q92186 375 aa9.08□□□□□ -0.96
TRAF1-202ENST00000540010 GIMAP5Q96F15 307 aa9.08□□□□□ -0.96
TRAF1-202ENST00000540010 SLC41A2Q96JW4 573 aa9.08□□□□□ -0.96
TRAF1-202ENST00000540010 SPACA5Q96QH8 159 aa9.08□□□□□ -0.96
TRAF1-202ENST00000540010 PBDC1Q9BVG4 233 aa9.08□□□□□ -0.96
TRAF1-202ENST00000540010 DUSP22Q9NRW4 184 aa9.08□□□□□ -0.96
TRAF1-202ENST00000540010 TMEM235A6NFC5 223 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 IFITM5A6NNB3 132 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 SNAPINO95295 136 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 RECKO95980 971 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 OMGP23515 440 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms