RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 TRAV14DV4A0A0A6YYC5 116 aa7.05□□□□□ -1.28
CPSF7-216ENST00000536548 IGKV1-8A0A0C4DH67 115 aa7.05□□□□□ -1.28
CPSF7-216ENST00000536548 A0A1B0GWA3 101 aa7.05□□□□□ -1.28
CPSF7-216ENST00000536548 TMEM82A0PJX8 343 aa7.05□□□□□ -1.28
CPSF7-216ENST00000536548 TMEM218A2RU14 115 aa7.05□□□□□ -1.28
CPSF7-216ENST00000536548 GGT3PA6NGU5 568 aa7.05□□□□□ -1.28
CPSF7-216ENST00000536548 H0Y8X5 98 aa7.05□□□□□ -1.28
CPSF7-216ENST00000536548 K7ENP7 123 aa7.05□□□□□ -1.28
CPSF7-216ENST00000536548 GNB5O14775 395 aa7.05□□□□□ -1.28
CPSF7-216ENST00000536548 PHYHO14832 338 aa7.05□□□□□ -1.28
CPSF7-216ENST00000536548 PPM1DO15297 605 aa7.05□□□□□ -1.28
CPSF7-216ENST00000536548 ZNF254O75437 659 aa7.05□□□□□ -1.28
CPSF7-216ENST00000536548 IGF2P01344 180 aa7.05□□□□□ -1.28
CPSF7-216ENST00000536548 S100A8P05109 93 aa7.05□□□□□ -1.28
CPSF7-216ENST00000536548 GYPBP06028 91 aa7.05□□□□□ -1.28
CPSF7-216ENST00000536548 S100A9P06702 114 aaKnown RBP7.05□□□□□ -1.28
CPSF7-216ENST00000536548 HIST1H1CP16403 213 aaKnown RBP7.05□□□□□ -1.28
CPSF7-216ENST00000536548 SPI1P17947 270 aa7.05□□□□□ -1.28
CPSF7-216ENST00000536548 AK4P27144 223 aaPredicted RBP7.05□□□□□ -1.28
CPSF7-216ENST00000536548 CD34P28906 385 aa7.05□□□□□ -1.28
CPSF7-216ENST00000536548 RPL4P36578 427 aaKnown RBP7.05□□□□□ -1.28
CPSF7-216ENST00000536548 DLSTP36957 453 aa7.05□□□□□ -1.28
CPSF7-216ENST00000536548 TNFRSF4P43489 277 aa7.05□□□□□ -1.28
CPSF7-216ENST00000536548 MEOX2P50222 304 aa7.05□□□□□ -1.28
CPSF7-216ENST00000536548 CAPZA1P52907 286 aa7.05□□□□□ -1.28
CPSF7-216ENST00000536548 SLC25A1P53007 311 aa7.05□□□□□ -1.28
CPSF7-216ENST00000536548 RPS15AP62244 130 aaKnown RBP7.05□□□□□ -1.28
CPSF7-216ENST00000536548 PPIAP62937 165 aaKnown RBP7.05□□□□□ -1.28
CPSF7-216ENST00000536548 CDK3Q00526 305 aa7.05□□□□□ -1.28
CPSF7-216ENST00000536548 DHCR24Q15392 516 aa7.05□□□□□ -1.28
CPSF7-216ENST00000536548 HFEQ30201 348 aa7.05□□□□□ -1.28
CPSF7-216ENST00000536548 FNDC3BQ53EP0 1204 aaKnown RBP7.05□□□□□ -1.28
CPSF7-216ENST00000536548 VWA2Q5GFL6 755 aa7.05□□□□□ -1.28
CPSF7-216ENST00000536548 NKAPLQ5M9Q1 402 aa7.05□□□□□ -1.28
CPSF7-216ENST00000536548 C11orf87Q6NUJ2 197 aa7.05□□□□□ -1.28
CPSF7-216ENST00000536548 STEAP1BQ6NZ63 245 aa7.05□□□□□ -1.28
CPSF7-216ENST00000536548 INO80CQ6PI98 192 aaPredicted RBP7.05□□□□□ -1.28
CPSF7-216ENST00000536548 FAM122BQ7Z309 247 aa7.05□□□□□ -1.28
CPSF7-216ENST00000536548 OR2W3Q7Z3T1 314 aa7.05□□□□□ -1.28
CPSF7-216ENST00000536548 LRRTM1Q86UE6 522 aa7.05□□□□□ -1.28
CPSF7-216ENST00000536548 RELL2Q8NC24 303 aaPredicted RBP7.05□□□□□ -1.28
CPSF7-216ENST00000536548 STEAP2Q8NFT2 490 aa7.05□□□□□ -1.28
CPSF7-216ENST00000536548 OR5M8Q8NGP6 311 aa7.05□□□□□ -1.28
CPSF7-216ENST00000536548 OR8K3Q8NH51 312 aa7.05□□□□□ -1.28
CPSF7-216ENST00000536548 THAP6Q8TBB0 222 aa7.05□□□□□ -1.28
CPSF7-216ENST00000536548 GPR148Q8TDV2 347 aa7.05□□□□□ -1.28
CPSF7-216ENST00000536548 WDR89Q96FK6 387 aaPredicted RBP7.05□□□□□ -1.28
CPSF7-216ENST00000536548 VRK1Q99986 396 aaPredicted RBP7.05□□□□□ -1.28
CPSF7-216ENST00000536548 ZNF426Q9BUY5 554 aa7.05□□□□□ -1.28
CPSF7-216ENST00000536548 ZNF471Q9BX82 626 aaPredicted RBP7.05□□□□□ -1.28
CPSF7-216ENST00000536548 TTTY10Q9BZA0 68 aa7.05□□□□□ -1.28
CPSF7-216ENST00000536548 TMEM185BQ9H7F4 350 aa7.05□□□□□ -1.28
CPSF7-216ENST00000536548 BARX1Q9HBU1 254 aaPredicted RBP7.05□□□□□ -1.28
CPSF7-216ENST00000536548 FANCFQ9NPI8 374 aa7.05□□□□□ -1.28
CPSF7-216ENST00000536548 MEPEQ9NQ76 525 aaPredicted RBP7.05□□□□□ -1.28
CPSF7-216ENST00000536548 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.05□□□□□ -1.28
CPSF7-216ENST00000536548 ZFP57Q9NU63 452 aa7.05□□□□□ -1.28
CPSF7-216ENST00000536548 ANKRD10Q9NXR5 420 aa7.05□□□□□ -1.28
CPSF7-216ENST00000536548 COA4Q9NYJ1 87 aa7.05□□□□□ -1.28
CPSF7-216ENST00000536548 WSB2Q9NYS7 404 aaPredicted RBP7.05□□□□□ -1.28
CPSF7-216ENST00000536548 ZNF629Q9UEG4 869 aaPredicted RBP7.05□□□□□ -1.28
CPSF7-216ENST00000536548 SLC23A2Q9UGH3 650 aa7.05□□□□□ -1.28
CPSF7-216ENST00000536548 APOBEC3BQ9UH17 382 aaKnown RBP7.05□□□□□ -1.28
CPSF7-216ENST00000536548 TNFSF18Q9UNG2 199 aa7.05□□□□□ -1.28
CPSF7-216ENST00000536548 CARHSP1Q9Y2V2 147 aaKnown RBP7.05□□□□□ -1.28
CPSF7-216ENST00000536548 PRKAB1Q9Y478 270 aa7.05□□□□□ -1.28
CPSF7-216ENST00000536548 PCDHGA1Q9Y5H4 931 aa7.05□□□□□ -1.28
CPSF7-216ENST00000536548 IER3IP1Q9Y5U9 82 aa7.05□□□□□ -1.28
CPSF7-216ENST00000536548 HEBP2Q9Y5Z4 205 aa7.05□□□□□ -1.28
CPSF7-216ENST00000536548 NUMA1Q14980 2115 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 FBN3Q75N90 2809 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 TRBV5-7A0A0A0MS05 114 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 A0A0A6YYH2 397 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 A0A1B0GTI1 187 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 OR6C74A6NCV1 312 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 OR5H14A6NHG9 310 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 A6NJ64 397 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 TMEM212A6NML5 194 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 OR2AT4A6NND4 320 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 METTL12A8MUP2 240 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 C4orf51C9J302 202 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 B3GALT2O43825 422 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 PRICKLE3O43900 615 aaPredicted RBP7.04□□□□□ -1.28
CPSF7-216ENST00000536548 CTAG2O75638 210 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 ZFPL1O95159 310 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 RAB3DO95716 219 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 PCCBP05166 539 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 OR4E1P0C645 316 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 SLC35G6P0C7Q6 338 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 TPT1P13693 172 aaKnown RBP7.04□□□□□ -1.28
CPSF7-216ENST00000536548 CPMP14384 443 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 HLA-GP17693 338 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 PTNP21246 168 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 MST1P26927 711 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 NTSR1P30989 418 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 LUMP51884 338 aaPredicted RBP7.04□□□□□ -1.28
CPSF7-216ENST00000536548 HCCSP53701 268 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 CLDN12P56749 244 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 CLDN2P57739 230 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 PRPS1P60891 318 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 1011.1 ms