RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 ALKBH6Q3KRA9 238 aa11.22□□□□□ -0.61
RTN3-207ENST00000536011 ZNF718Q3SXZ3 478 aa11.22□□□□□ -0.61
RTN3-207ENST00000536011 ZMAT1Q5H9K5 638 aa11.22□□□□□ -0.61
RTN3-207ENST00000536011 ARL9Q6T311 187 aa11.22□□□□□ -0.61
RTN3-207ENST00000536011 THSD4Q6ZMP0 1018 aa11.22□□□□□ -0.61
RTN3-207ENST00000536011 OFCC1Q8IZS5 231 aa11.22□□□□□ -0.61
RTN3-207ENST00000536011 RAB39BQ96DA2 213 aa11.22□□□□□ -0.61
RTN3-207ENST00000536011 TIMD4Q96H15 378 aa11.22□□□□□ -0.61
RTN3-207ENST00000536011 FNDC11Q9BVV2 318 aa11.22□□□□□ -0.61
RTN3-207ENST00000536011 NARFLQ9H6Q4 476 aa11.22□□□□□ -0.61
RTN3-207ENST00000536011 SAP30LQ9HAJ7 183 aa11.22□□□□□ -0.61
RTN3-207ENST00000536011 CYSLTR2Q9NS75 346 aa11.22□□□□□ -0.61
RTN3-207ENST00000536011 HIF1ANQ9NWT6 349 aa11.22□□□□□ -0.61
RTN3-207ENST00000536011 UGT2A1Q9Y4X1 527 aa11.22□□□□□ -0.61
RTN3-207ENST00000536011 TRAV20A0A0B4J274 112 aa11.21□□□□□ -0.61
RTN3-207ENST00000536011 IGHV1-69-2A0A0G2JMI3 117 aa11.21□□□□□ -0.61
RTN3-207ENST00000536011 C5orf49A4QMS7 147 aa11.21□□□□□ -0.61
RTN3-207ENST00000536011 CLDN25C9JDP6 229 aa11.21□□□□□ -0.61
RTN3-207ENST00000536011 NDUFAB1O14561 156 aa11.21□□□□□ -0.61
RTN3-207ENST00000536011 CLPTM1O96005 669 aa11.21□□□□□ -0.61
RTN3-207ENST00000536011 GAAP10253 952 aa11.21□□□□□ -0.61
RTN3-207ENST00000536011 ZNF32P17041 273 aa11.21□□□□□ -0.61
RTN3-207ENST00000536011 CDAP32320 146 aa11.21□□□□□ -0.61
RTN3-207ENST00000536011 LIPAP38571 399 aa11.21□□□□□ -0.61
RTN3-207ENST00000536011 CRYBB2P43320 205 aa11.21□□□□□ -0.61
RTN3-207ENST00000536011 MAGEB1P43366 347 aa11.21□□□□□ -0.61
RTN3-207ENST00000536011 SLC9A3P48764 834 aa11.21□□□□□ -0.61
RTN3-207ENST00000536011 LAPTM4AQ15012 233 aa11.21□□□□□ -0.61
RTN3-207ENST00000536011 TRAM2Q15035 370 aa11.21□□□□□ -0.61
RTN3-207ENST00000536011 FAM27BQ5VT28 67 aa11.21□□□□□ -0.61
RTN3-207ENST00000536011 OAFQ86UD1 273 aa11.21□□□□□ -0.61
RTN3-207ENST00000536011 GEMIN6Q8WXD5 167 aaKnown RBP11.21□□□□□ -0.61
RTN3-207ENST00000536011 NSMAFQ92636 917 aa11.21□□□□□ -0.61
RTN3-207ENST00000536011 HDAC2Q92769 488 aaKnown RBP11.21□□□□□ -0.61
RTN3-207ENST00000536011 YIPF5Q969M3 257 aa11.21□□□□□ -0.61
RTN3-207ENST00000536011 NABP1Q96AH0 204 aa11.21□□□□□ -0.61
RTN3-207ENST00000536011 NMD3Q96D46 503 aaKnown RBP11.21□□□□□ -0.61
RTN3-207ENST00000536011 ELMOD3Q96FG2 381 aa11.21□□□□□ -0.61
RTN3-207ENST00000536011 WACQ9BTA9 647 aa11.21□□□□□ -0.61
RTN3-207ENST00000536011 EGLN1Q9GZT9 426 aa11.21□□□□□ -0.61
RTN3-207ENST00000536011 A4GNTQ9UNA3 340 aa11.21□□□□□ -0.61
RTN3-207ENST00000536011 A0A0A6YYJ9 748 aa11.2□□□□□ -0.62
RTN3-207ENST00000536011 C12orf71A8MTZ7 269 aa11.2□□□□□ -0.62
RTN3-207ENST00000536011 EFCAB9A8MZ26 197 aa11.2□□□□□ -0.62
RTN3-207ENST00000536011 GSTA4O15217 222 aa11.2□□□□□ -0.62
RTN3-207ENST00000536011 PIP5K1CO60331 668 aa11.2□□□□□ -0.62
RTN3-207ENST00000536011 CDC14BO60729 498 aa11.2□□□□□ -0.62
RTN3-207ENST00000536011 SASH3O75995 380 aa11.2□□□□□ -0.62
RTN3-207ENST00000536011 ZNF682O95780 498 aa11.2□□□□□ -0.62
RTN3-207ENST00000536011 CST2P09228 141 aa11.2□□□□□ -0.62
RTN3-207ENST00000536011 ZNF81P51508 661 aa11.2□□□□□ -0.62
RTN3-207ENST00000536011 ARHGDIAP52565 204 aa11.2□□□□□ -0.62
RTN3-207ENST00000536011 CTXN1P60606 82 aa11.2□□□□□ -0.62
RTN3-207ENST00000536011 FMODQ06828 376 aa11.2□□□□□ -0.62
RTN3-207ENST00000536011 SLC3A1Q07837 685 aa11.2□□□□□ -0.62
RTN3-207ENST00000536011 HFEQ30201 348 aa11.2□□□□□ -0.62
RTN3-207ENST00000536011 HSP90B2PQ58FF3 399 aa11.2□□□□□ -0.62
RTN3-207ENST00000536011 ACSM5Q6NUN0 579 aa11.2□□□□□ -0.62
RTN3-207ENST00000536011 SLC25A47Q6Q0C1 308 aa11.2□□□□□ -0.62
RTN3-207ENST00000536011 RRM2BQ7LG56 351 aa11.2□□□□□ -0.62
RTN3-207ENST00000536011 CYP4Z1Q86W10 505 aa11.2□□□□□ -0.62
RTN3-207ENST00000536011 RNF113BQ8IZP6 322 aaKnown RBP11.2□□□□□ -0.62
RTN3-207ENST00000536011 RP9Q8TA86 221 aaKnown RBP11.2□□□□□ -0.62
RTN3-207ENST00000536011 ACOT11Q8WXI4 607 aaPredicted RBP11.2□□□□□ -0.62
RTN3-207ENST00000536011 RAB1CQ92928 201 aa11.2□□□□□ -0.62
RTN3-207ENST00000536011 RCN3Q96D15 328 aa11.2□□□□□ -0.62
RTN3-207ENST00000536011 POM121L2Q96KW2 1035 aa11.2□□□□□ -0.62
RTN3-207ENST00000536011 LRRC37BQ96QE4 947 aa11.2□□□□□ -0.62
RTN3-207ENST00000536011 DIRC2Q96SL1 478 aa11.2□□□□□ -0.62
RTN3-207ENST00000536011 ELOVL3Q9HB03 270 aa11.2□□□□□ -0.62
RTN3-207ENST00000536011 LPAR2Q9HBW0 351 aa11.2□□□□□ -0.62
RTN3-207ENST00000536011 TREM2Q9NZC2 230 aa11.2□□□□□ -0.62
RTN3-207ENST00000536011 TIMM10BQ9Y5J6 103 aa11.2□□□□□ -0.62
RTN3-207ENST00000536011 A0A1W2PPL8 197 aa11.19□□□□□ -0.62
RTN3-207ENST00000536011 XKRYO14609 159 aa11.19□□□□□ -0.62
RTN3-207ENST00000536011 AHCYL1O43865 530 aa11.19□□□□□ -0.62
RTN3-207ENST00000536011 ICMTO60725 284 aa11.19□□□□□ -0.62
RTN3-207ENST00000536011 PNPP00491 289 aa11.19□□□□□ -0.62
RTN3-207ENST00000536011 MSR1P21757 451 aa11.19□□□□□ -0.62
RTN3-207ENST00000536011 LAP3P28838 519 aa11.19□□□□□ -0.62
RTN3-207ENST00000536011 ERVS71-1P61550 626 aa11.19□□□□□ -0.62
RTN3-207ENST00000536011 ERVK-25P63136 954 aa11.19□□□□□ -0.62
RTN3-207ENST00000536011 PSG4Q00888 419 aa11.19□□□□□ -0.62
RTN3-207ENST00000536011 GLO1Q04760 184 aa11.19□□□□□ -0.62
RTN3-207ENST00000536011 PRKCDQ05655 676 aa11.19□□□□□ -0.62
RTN3-207ENST00000536011 IFI44LQ53G44 452 aa11.19□□□□□ -0.62
RTN3-207ENST00000536011 MBNL2Q5VZF2 373 aaKnown RBP11.19□□□□□ -0.62
RTN3-207ENST00000536011 ZNF730Q6ZMV8 503 aa11.19□□□□□ -0.62
RTN3-207ENST00000536011 USP51Q70EK9 711 aa11.19□□□□□ -0.62
RTN3-207ENST00000536011 ZER1Q7Z7L7 766 aa11.19□□□□□ -0.62
RTN3-207ENST00000536011 SYT9Q86SS6 491 aa11.19□□□□□ -0.62
RTN3-207ENST00000536011 PEG10Q86TG7 708 aaKnown RBP11.19□□□□□ -0.62
RTN3-207ENST00000536011 NRMQ8IXM6 262 aa11.19□□□□□ -0.62
RTN3-207ENST00000536011 FAM156AQ8NDB6 213 aa11.19□□□□□ -0.62
RTN3-207ENST00000536011 OR51A7Q8NH64 312 aa11.19□□□□□ -0.62
RTN3-207ENST00000536011 AKR7LQ8NHP1 331 aa11.19□□□□□ -0.62
RTN3-207ENST00000536011 TSPAN32Q96QS1 320 aa11.19□□□□□ -0.62
RTN3-207ENST00000536011 HOPXQ9BPY8 73 aaPredicted RBP11.19□□□□□ -0.62
RTN3-207ENST00000536011 OR2H1Q9GZK4 316 aa11.19□□□□□ -0.62
RTN3-207ENST00000536011 ANKRD19PQ9H560 264 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms