RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 WACQ9BTA9 647 aa11.33□□□□□ -0.6
CLSTN3-205ENST00000535452 ZNF426Q9BUY5 554 aa11.33□□□□□ -0.6
CLSTN3-205ENST00000535452 TMEM120AQ9BXJ8 343 aa11.33□□□□□ -0.6
CLSTN3-205ENST00000535452 TXNIPQ9H3M7 391 aa11.33□□□□□ -0.6
CLSTN3-205ENST00000535452 VIPAS39Q9H9C1 493 aa11.33□□□□□ -0.6
CLSTN3-205ENST00000535452 MYEF2Q9P2K5 600 aaKnown RBP11.33□□□□□ -0.6
CLSTN3-205ENST00000535452 ZDHHC8Q9ULC8 765 aa11.33□□□□□ -0.6
CLSTN3-205ENST00000535452 TIMM10BQ9Y5J6 103 aa11.33□□□□□ -0.6
CLSTN3-205ENST00000535452 STAB1Q9NY15 2570 aa11.33□□□□□ -0.6
CLSTN3-205ENST00000535452 FBN1P35555 2871 aaKnown RBP11.33□□□□□ -0.6
CLSTN3-205ENST00000535452 NPIPB13A6NJU9 1138 aa11.32□□□□□ -0.6
CLSTN3-205ENST00000535452 NPIPB4C9JG80 1138 aa11.32□□□□□ -0.6
CLSTN3-205ENST00000535452 H3BSA7 217 aa11.32□□□□□ -0.6
CLSTN3-205ENST00000535452 NDUFAB1O14561 156 aa11.32□□□□□ -0.6
CLSTN3-205ENST00000535452 SURF4O15260 269 aa11.32□□□□□ -0.6
CLSTN3-205ENST00000535452 TIMM8AO60220 97 aaPredicted RBP11.32□□□□□ -0.6
CLSTN3-205ENST00000535452 CLPTM1O96005 669 aa11.32□□□□□ -0.6
CLSTN3-205ENST00000535452 IGHV3-13P01766 116 aa11.32□□□□□ -0.6
CLSTN3-205ENST00000535452 ZNF32P17041 273 aa11.32□□□□□ -0.6
CLSTN3-205ENST00000535452 TUBG1P23258 451 aa11.32□□□□□ -0.6
CLSTN3-205ENST00000535452 SCRN3Q0VDG4 424 aa11.32□□□□□ -0.6
CLSTN3-205ENST00000535452 PIN1Q13526 163 aaPredicted RBP11.32□□□□□ -0.6
CLSTN3-205ENST00000535452 TTMPQ5BVD1 217 aa11.32□□□□□ -0.6
CLSTN3-205ENST00000535452 FKBP9P1Q75LS8 142 aa11.32□□□□□ -0.6
CLSTN3-205ENST00000535452 MEX3DQ86XN8 651 aaKnown RBP11.32□□□□□ -0.6
CLSTN3-205ENST00000535452 PFN4Q8NHR9 129 aa11.32□□□□□ -0.6
CLSTN3-205ENST00000535452 BPIFA2Q96DR5 249 aa11.32□□□□□ -0.6
CLSTN3-205ENST00000535452 PRRC1Q96M27 445 aa11.32□□□□□ -0.6
CLSTN3-205ENST00000535452 MEPEQ9NQ76 525 aaPredicted RBP11.32□□□□□ -0.6
CLSTN3-205ENST00000535452 TUBG2Q9NRH3 451 aa11.32□□□□□ -0.6
CLSTN3-205ENST00000535452 UBAP1Q9NZ09 502 aa11.32□□□□□ -0.6
CLSTN3-205ENST00000535452 GRHPRQ9UBQ7 328 aa11.32□□□□□ -0.6
CLSTN3-205ENST00000535452 DNHD1Q96M86 4753 aa11.32□□□□□ -0.6
CLSTN3-205ENST00000535452 ELOVL7A1L3X0 281 aa11.31□□□□□ -0.6
CLSTN3-205ENST00000535452 EFCAB9A8MZ26 197 aa11.31□□□□□ -0.6
CLSTN3-205ENST00000535452 FAM220BPB1ANY3 271 aa11.31□□□□□ -0.6
CLSTN3-205ENST00000535452 FAM157AC9JC47 383 aa11.31□□□□□ -0.6
CLSTN3-205ENST00000535452 FOXH1O75593 365 aa11.31□□□□□ -0.6
CLSTN3-205ENST00000535452 NCR1O76036 304 aa11.31□□□□□ -0.6
CLSTN3-205ENST00000535452 SLC2A10O95528 541 aa11.31□□□□□ -0.6
CLSTN3-205ENST00000535452 ABHD16AO95870 558 aa11.31□□□□□ -0.6
CLSTN3-205ENST00000535452 EPHA1P21709 976 aa11.31□□□□□ -0.6
CLSTN3-205ENST00000535452 OR1E2P47887 323 aa11.31□□□□□ -0.6
CLSTN3-205ENST00000535452 SLC9A3P48764 834 aa11.31□□□□□ -0.6
CLSTN3-205ENST00000535452 CTXN1P60606 82 aa11.31□□□□□ -0.6
CLSTN3-205ENST00000535452 RPL27P61353 136 aaKnown RBP11.31□□□□□ -0.6
CLSTN3-205ENST00000535452 ERVK-25P63136 954 aa11.31□□□□□ -0.6
CLSTN3-205ENST00000535452 TRAM2Q15035 370 aa11.31□□□□□ -0.6
CLSTN3-205ENST00000535452 HIST3H3Q16695 136 aa11.31□□□□□ -0.6
CLSTN3-205ENST00000535452 CYBRD1Q53TN4 286 aa11.31□□□□□ -0.6
CLSTN3-205ENST00000535452 HSP90B2PQ58FF3 399 aa11.31□□□□□ -0.6
CLSTN3-205ENST00000535452 FAM27BQ5VT28 67 aa11.31□□□□□ -0.6
CLSTN3-205ENST00000535452 ZNF730Q6ZMV8 503 aa11.31□□□□□ -0.6
CLSTN3-205ENST00000535452 OAFQ86UD1 273 aa11.31□□□□□ -0.6
CLSTN3-205ENST00000535452 NKAIN4Q8IVV8 208 aa11.31□□□□□ -0.6
CLSTN3-205ENST00000535452 KLHL36Q8N4N3 616 aa11.31□□□□□ -0.6
CLSTN3-205ENST00000535452 SPICQ8N5J4 248 aa11.31□□□□□ -0.6
CLSTN3-205ENST00000535452 NPEPL1Q8NDH3 523 aa11.31□□□□□ -0.6
CLSTN3-205ENST00000535452 YIPF5Q969M3 257 aa11.31□□□□□ -0.6
CLSTN3-205ENST00000535452 MRPL13Q9BYD1 178 aaKnown RBP11.31□□□□□ -0.6
CLSTN3-205ENST00000535452 NTN4Q9HB63 628 aa11.31□□□□□ -0.6
CLSTN3-205ENST00000535452 DDX28Q9NUL7 540 aaKnown RBP11.31□□□□□ -0.6
CLSTN3-205ENST00000535452 POLR1DQ9Y2S0 133 aa11.31□□□□□ -0.6
CLSTN3-205ENST00000535452 FAM32AQ9Y421 112 aaKnown RBP11.31□□□□□ -0.6
CLSTN3-205ENST00000535452 CAPN7Q9Y6W3 813 aa11.31□□□□□ -0.6
CLSTN3-205ENST00000535452 YLPM1P49750 1951 aaKnown RBP11.3□□□□□ -0.6
CLSTN3-205ENST00000535452 MALRD1Q5VYJ5 2156 aa11.3□□□□□ -0.6
CLSTN3-205ENST00000535452 SHOX2O60902 331 aaPredicted RBP11.3□□□□□ -0.6
CLSTN3-205ENST00000535452 ZNF682O95780 498 aa11.3□□□□□ -0.6
CLSTN3-205ENST00000535452 CST2P09228 141 aa11.3□□□□□ -0.6
CLSTN3-205ENST00000535452 MSR1P21757 451 aa11.3□□□□□ -0.6
CLSTN3-205ENST00000535452 CDAP32320 146 aa11.3□□□□□ -0.6
CLSTN3-205ENST00000535452 KDELR2P33947 212 aa11.3□□□□□ -0.6
CLSTN3-205ENST00000535452 ERVS71-1P61550 626 aa11.3□□□□□ -0.6
CLSTN3-205ENST00000535452 PPP1CBP62140 327 aa11.3□□□□□ -0.6
CLSTN3-205ENST00000535452 SELENOWP63302 87 aa11.3□□□□□ -0.6
CLSTN3-205ENST00000535452 RABL3Q5HYI8 236 aa11.3□□□□□ -0.6
CLSTN3-205ENST00000535452 SPATA46Q5T0L3 261 aa11.3□□□□□ -0.6
CLSTN3-205ENST00000535452 NHLRC1Q6VVB1 395 aa11.3□□□□□ -0.6
CLSTN3-205ENST00000535452 RNF113BQ8IZP6 322 aaKnown RBP11.3□□□□□ -0.6
CLSTN3-205ENST00000535452 PAQR4Q8N4S7 273 aaPredicted RBP11.3□□□□□ -0.6
CLSTN3-205ENST00000535452 OR4D11Q8NGI4 311 aa11.3□□□□□ -0.6
CLSTN3-205ENST00000535452 FGFBP3Q8TAT2 258 aa11.3□□□□□ -0.6
CLSTN3-205ENST00000535452 SLC25A40Q8TBP6 338 aa11.3□□□□□ -0.6
CLSTN3-205ENST00000535452 C10orf82Q8WW14 230 aa11.3□□□□□ -0.6
CLSTN3-205ENST00000535452 LIPHQ8WWY8 451 aa11.3□□□□□ -0.6
CLSTN3-205ENST00000535452 PRSS27Q9BQR3 290 aa11.3□□□□□ -0.6
CLSTN3-205ENST00000535452 RSPO3Q9BXY4 272 aaPredicted RBP11.3□□□□□ -0.6
CLSTN3-205ENST00000535452 TMEM5Q9Y2B1 443 aa11.3□□□□□ -0.6
CLSTN3-205ENST00000535452 HIF3AQ9Y2N7 669 aa11.3□□□□□ -0.6
CLSTN3-205ENST00000535452 WIPI2Q9Y4P8 454 aa11.3□□□□□ -0.6
CLSTN3-205ENST00000535452 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.3□□□□□ -0.6
CLSTN3-205ENST00000535452 ANK3Q12955 4377 aaKnown RBP11.3□□□□□ -0.6
CLSTN3-205ENST00000535452 LOC100653049A0A140TA62 436 aa11.29□□□□□ -0.6
CLSTN3-205ENST00000535452 RP2O75695 350 aa11.29□□□□□ -0.6
CLSTN3-205ENST00000535452 KRT34O76011 436 aa11.29□□□□□ -0.6
CLSTN3-205ENST00000535452 THY1P04216 161 aa11.29□□□□□ -0.6
CLSTN3-205ENST00000535452 LAP3P28838 519 aa11.29□□□□□ -0.6
CLSTN3-205ENST00000535452 TNFAIP6P98066 277 aaPredicted RBP11.29□□□□□ -0.6
CLSTN3-205ENST00000535452 RUNX1T1Q06455 604 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms