RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 ABHD4Q8TB40 342 aa6.82□□□□□ -1.32
CLIP1-206ENST00000535290 EPS8L3Q8TE67 593 aaKnown RBP6.82□□□□□ -1.32
CLIP1-206ENST00000535290 TMEM54Q969K7 222 aa6.82□□□□□ -1.32
CLIP1-206ENST00000535290 SLC41A3Q96GZ6 507 aa6.82□□□□□ -1.32
CLIP1-206ENST00000535290 HSH2DQ96JZ2 352 aa6.82□□□□□ -1.32
CLIP1-206ENST00000535290 POM121L2Q96KW2 1035 aa6.82□□□□□ -1.32
CLIP1-206ENST00000535290 WDFY2Q96P53 400 aa6.82□□□□□ -1.32
CLIP1-206ENST00000535290 OR2V2Q96R30 315 aa6.82□□□□□ -1.32
CLIP1-206ENST00000535290 OR4F4Q96R69 305 aa6.82□□□□□ -1.32
CLIP1-206ENST00000535290 NAPGQ99747 312 aaPredicted RBP6.82□□□□□ -1.32
CLIP1-206ENST00000535290 GCM1Q9NP62 436 aa6.82□□□□□ -1.32
CLIP1-206ENST00000535290 A4GALTQ9NPC4 353 aa6.82□□□□□ -1.32
CLIP1-206ENST00000535290 GLTPQ9NZD2 209 aa6.82□□□□□ -1.32
CLIP1-206ENST00000535290 CGGBP1Q9UFW8 167 aaPredicted RBP6.82□□□□□ -1.32
CLIP1-206ENST00000535290 FAM96BQ9Y3D0 163 aa6.82□□□□□ -1.32
CLIP1-206ENST00000535290 C5orf49A4QMS7 147 aa6.81□□□□□ -1.32
CLIP1-206ENST00000535290 BTBD17A6NE02 478 aa6.81□□□□□ -1.32
CLIP1-206ENST00000535290 RNASET2O00584 256 aaKnown RBP6.81□□□□□ -1.32
CLIP1-206ENST00000535290 PHYHO14832 338 aa6.81□□□□□ -1.32
CLIP1-206ENST00000535290 TIMM8AO60220 97 aaPredicted RBP6.81□□□□□ -1.32
CLIP1-206ENST00000535290 FARS2O95363 451 aaKnown RBP6.81□□□□□ -1.32
CLIP1-206ENST00000535290 CPSF4O95639 269 aaKnown RBP6.81□□□□□ -1.32
CLIP1-206ENST00000535290 NHLRC4P0CG21 123 aaPredicted RBP6.81□□□□□ -1.32
CLIP1-206ENST00000535290 MYL2P10916 166 aa6.81□□□□□ -1.32
CLIP1-206ENST00000535290 TNFSF4P23510 183 aa6.81□□□□□ -1.32
CLIP1-206ENST00000535290 EPHA3P29320 983 aa6.81□□□□□ -1.32
CLIP1-206ENST00000535290 RPL4P36578 427 aaKnown RBP6.81□□□□□ -1.32
CLIP1-206ENST00000535290 ETV4P43268 484 aa6.81□□□□□ -1.32
CLIP1-206ENST00000535290 KIR2DS4P43632 304 aa6.81□□□□□ -1.32
CLIP1-206ENST00000535290 BIDP55957 195 aa6.81□□□□□ -1.32
CLIP1-206ENST00000535290 DNAJB13P59910 316 aa6.81□□□□□ -1.32
CLIP1-206ENST00000535290 HSF2Q03933 536 aa6.81□□□□□ -1.32
CLIP1-206ENST00000535290 MAPK11Q15759 364 aa6.81□□□□□ -1.32
CLIP1-206ENST00000535290 UGT3A2Q3SY77 523 aa6.81□□□□□ -1.32
CLIP1-206ENST00000535290 ZNF404Q494X3 552 aa6.81□□□□□ -1.32
CLIP1-206ENST00000535290 LCE2CQ5TA81 110 aa6.81□□□□□ -1.32
CLIP1-206ENST00000535290 KANK2Q63ZY3 851 aa6.81□□□□□ -1.32
CLIP1-206ENST00000535290 NLRC3Q7RTR2 1065 aa6.81□□□□□ -1.32
CLIP1-206ENST00000535290 RNF144BQ7Z419 303 aa6.81□□□□□ -1.32
CLIP1-206ENST00000535290 NET1Q7Z628 596 aaPredicted RBP6.81□□□□□ -1.32
CLIP1-206ENST00000535290 DPPA2Q7Z7J5 298 aa6.81□□□□□ -1.32
CLIP1-206ENST00000535290 LCA5Q86VQ0 697 aa6.81□□□□□ -1.32
CLIP1-206ENST00000535290 PEX5LQ8IYB4 626 aa6.81□□□□□ -1.32
CLIP1-206ENST00000535290 LRRC18Q8N456 261 aa6.81□□□□□ -1.32
CLIP1-206ENST00000535290 HIPK4Q8NE63 616 aa6.81□□□□□ -1.32
CLIP1-206ENST00000535290 OR52P1PQ8NH57 321 aa6.81□□□□□ -1.32
CLIP1-206ENST00000535290 SIRPDQ9H106 197 aa6.81□□□□□ -1.32
CLIP1-206ENST00000535290 SRA1Q9HD15 236 aaKnown RBP6.81□□□□□ -1.32
CLIP1-206ENST00000535290 ZDHHC18Q9NUE0 388 aa6.81□□□□□ -1.32
CLIP1-206ENST00000535290 NOP53Q9NZM5 478 aaKnown RBP6.81□□□□□ -1.32
CLIP1-206ENST00000535290 ZNRD1Q9P1U0 126 aa6.81□□□□□ -1.32
CLIP1-206ENST00000535290 KLHL14Q9P2G3 628 aa6.81□□□□□ -1.32
CLIP1-206ENST00000535290 EIF3KQ9UBQ5 218 aaKnown RBP6.81□□□□□ -1.32
CLIP1-206ENST00000535290 MARCOQ9UEW3 520 aaPredicted RBP6.81□□□□□ -1.32
CLIP1-206ENST00000535290 IL19Q9UHD0 177 aa6.81□□□□□ -1.32
CLIP1-206ENST00000535290 PRDM4Q9UKN5 801 aa6.81□□□□□ -1.32
CLIP1-206ENST00000535290 UTP11Q9Y3A2 253 aaKnown RBP6.81□□□□□ -1.32
CLIP1-206ENST00000535290 SAR1BQ9Y6B6 198 aa6.81□□□□□ -1.32
CLIP1-206ENST00000535290 TRAV36DV7A0A075B6V5 113 aa6.8□□□□□ -1.32
CLIP1-206ENST00000535290 IGHV3-64DA0A0J9YX35 117 aa6.8□□□□□ -1.32
CLIP1-206ENST00000535290 EXOC1LA0A1B0GW35 172 aa6.8□□□□□ -1.32
CLIP1-206ENST00000535290 LRRN3E7EW58 273 aa6.8□□□□□ -1.32
CLIP1-206ENST00000535290 ENTPD5O75356 428 aa6.8□□□□□ -1.32
CLIP1-206ENST00000535290 FBXO24O75426 580 aa6.8□□□□□ -1.32
CLIP1-206ENST00000535290 CHEK2O96017 543 aa6.8□□□□□ -1.32
CLIP1-206ENST00000535290 F13BP05160 661 aa6.8□□□□□ -1.32
CLIP1-206ENST00000535290 NR2F1P10589 423 aa6.8□□□□□ -1.32
CLIP1-206ENST00000535290 G6PDP11413 515 aa6.8□□□□□ -1.32
CLIP1-206ENST00000535290 BMP2P12643 396 aa6.8□□□□□ -1.32
CLIP1-206ENST00000535290 SNRPBP14678 240 aaKnown RBP6.8□□□□□ -1.32
CLIP1-206ENST00000535290 AHCYP23526 432 aa6.8□□□□□ -1.32
CLIP1-206ENST00000535290 HOXD3P31249 432 aaPredicted RBP6.8□□□□□ -1.32
CLIP1-206ENST00000535290 CHI3L1P36222 383 aaPredicted RBP6.8□□□□□ -1.32
CLIP1-206ENST00000535290 NAA20P61599 178 aa6.8□□□□□ -1.32
CLIP1-206ENST00000535290 ARF6P62330 175 aa6.8□□□□□ -1.32
CLIP1-206ENST00000535290 PRB3Q04118 309 aaPredicted RBP6.8□□□□□ -1.32
CLIP1-206ENST00000535290 PUDPQ08623 228 aa6.8□□□□□ -1.32
CLIP1-206ENST00000535290 C6orf136Q5SQH8 315 aa6.8□□□□□ -1.32
CLIP1-206ENST00000535290 METTL11BQ5VVY1 283 aa6.8□□□□□ -1.32
CLIP1-206ENST00000535290 C11orf88Q6PI97 169 aa6.8□□□□□ -1.32
CLIP1-206ENST00000535290 PXKQ7Z7A4 578 aa6.8□□□□□ -1.32
CLIP1-206ENST00000535290 CALHM3Q86XJ0 350 aa6.8□□□□□ -1.32
CLIP1-206ENST00000535290 NDUFA11Q86Y39 141 aa6.8□□□□□ -1.32
CLIP1-206ENST00000535290 PTOV1Q86YD1 416 aa6.8□□□□□ -1.32
CLIP1-206ENST00000535290 SPATA4Q8NEY3 305 aa6.8□□□□□ -1.32
CLIP1-206ENST00000535290 TWIST2Q8WVJ9 160 aa6.8□□□□□ -1.32
CLIP1-206ENST00000535290 SLC38A4Q969I6 547 aa6.8□□□□□ -1.32
CLIP1-206ENST00000535290 PPP3R2Q96LZ3 170 aa6.8□□□□□ -1.32
CLIP1-206ENST00000535290 C3orf30Q96M34 536 aa6.8□□□□□ -1.32
CLIP1-206ENST00000535290 MOGAT1Q96PD6 335 aa6.8□□□□□ -1.32
CLIP1-206ENST00000535290 CITED2Q99967 270 aaPredicted RBP6.8□□□□□ -1.32
CLIP1-206ENST00000535290 CENPHQ9H3R5 247 aa6.8□□□□□ -1.32
CLIP1-206ENST00000535290 RPUSD1Q9UJJ7 312 aaKnown RBP6.8□□□□□ -1.32
CLIP1-206ENST00000535290 E9PQ18 207 aa6.79□□□□□ -1.32
CLIP1-206ENST00000535290 H3BSA7 217 aa6.79□□□□□ -1.32
CLIP1-206ENST00000535290 PLPP3O14495 311 aa6.79□□□□□ -1.32
CLIP1-206ENST00000535290 BGLAPP02818 100 aa6.79□□□□□ -1.32
CLIP1-206ENST00000535290 OPN1SWP03999 348 aa6.79□□□□□ -1.32
CLIP1-206ENST00000535290 PROCP04070 461 aa6.79□□□□□ -1.32
CLIP1-206ENST00000535290 LIPFP07098 398 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms