RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 QDPRP09417 244 aa16.64■□□□□ 0.25
SFSWAP-203ENST00000535236 SRFP11831 508 aa16.64■□□□□ 0.25
SFSWAP-203ENST00000535236 RBP2P50120 134 aa16.64■□□□□ 0.25
SFSWAP-203ENST00000535236 HNRNPFP52597 415 aaKnown RBP16.64■□□□□ 0.25
SFSWAP-203ENST00000535236 RTN4RL1Q86UN2 441 aaPredicted RBP16.64■□□□□ 0.25
SFSWAP-203ENST00000535236 PRSS35Q8N3Z0 413 aa16.64■□□□□ 0.25
SFSWAP-203ENST00000535236 NDRG3Q9UGV2 375 aa16.64■□□□□ 0.25
SFSWAP-203ENST00000535236 EXO1Q9UQ84 846 aaKnown RBP16.64■□□□□ 0.25
SFSWAP-203ENST00000535236 NTNG1Q9Y2I2 539 aa16.64■□□□□ 0.25
SFSWAP-203ENST00000535236 CD22P20273 847 aa16.64■□□□□ 0.25
SFSWAP-203ENST00000535236 CNR1P21554 472 aa16.64■□□□□ 0.25
SFSWAP-203ENST00000535236 ANKRD33Q7Z3H0 272 aa16.64■□□□□ 0.25
SFSWAP-203ENST00000535236 ZPBPQ9BS86 351 aa16.64■□□□□ 0.25
SFSWAP-203ENST00000535236 ZDHHC5Q9C0B5 715 aa16.64■□□□□ 0.25
SFSWAP-203ENST00000535236 POLDIP2Q9Y2S7 368 aa16.64■□□□□ 0.25
SFSWAP-203ENST00000535236 F2RP25116 425 aa16.64■□□□□ 0.25
SFSWAP-203ENST00000535236 C3orf49Q96BT1 292 aa16.64■□□□□ 0.25
SFSWAP-203ENST00000535236 RANGRFQ9HD47 186 aaPredicted RBP16.64■□□□□ 0.25
SFSWAP-203ENST00000535236 CGGBP1Q9UFW8 167 aaPredicted RBP16.64■□□□□ 0.25
SFSWAP-203ENST00000535236 SCGB1D1O95968 90 aa16.64■□□□□ 0.25
SFSWAP-203ENST00000535236 CHRM2P08172 466 aa16.64■□□□□ 0.25
SFSWAP-203ENST00000535236 TBXA2RP21731 343 aa16.64■□□□□ 0.25
SFSWAP-203ENST00000535236 SIAH3Q8IW03 269 aa16.64■□□□□ 0.25
SFSWAP-203ENST00000535236 NUDT9Q9BW91 350 aa16.64■□□□□ 0.25
SFSWAP-203ENST00000535236 NAA50Q9GZZ1 169 aaKnown RBP16.64■□□□□ 0.25
SFSWAP-203ENST00000535236 SPACA1Q9HBV2 294 aa16.64■□□□□ 0.25
SFSWAP-203ENST00000535236 TSTD3H0UI37 97 aa16.63■□□□□ 0.25
SFSWAP-203ENST00000535236 STMND1H3BQB6 276 aa16.63■□□□□ 0.25
SFSWAP-203ENST00000535236 I6L893 689 aaPredicted RBP16.63■□□□□ 0.25
SFSWAP-203ENST00000535236 CRYAAP02489 173 aa16.63■□□□□ 0.25
SFSWAP-203ENST00000535236 HMGN3Q15651 99 aa16.63■□□□□ 0.25
SFSWAP-203ENST00000535236 VWA2Q5GFL6 755 aa16.63■□□□□ 0.25
SFSWAP-203ENST00000535236 CPEB2Q7Z5Q1 589 aaKnown RBP16.63■□□□□ 0.25
SFSWAP-203ENST00000535236 MORN4Q8NDC4 146 aa16.63■□□□□ 0.25
SFSWAP-203ENST00000535236 OR10X1Q8NGY0 326 aa16.63■□□□□ 0.25
SFSWAP-203ENST00000535236 BTF3L4Q96K17 158 aa16.63■□□□□ 0.25
SFSWAP-203ENST00000535236 MED18Q9BUE0 208 aa16.63■□□□□ 0.25
SFSWAP-203ENST00000535236 TMEM9BQ9NQ34 198 aa16.63■□□□□ 0.25
SFSWAP-203ENST00000535236 GMPR2Q9P2T1 348 aaKnown RBP16.63■□□□□ 0.25
SFSWAP-203ENST00000535236 TRGV8A0A0C4DH27 118 aa16.63■□□□□ 0.25
SFSWAP-203ENST00000535236 POM121BA6NF01 834 aa16.63■□□□□ 0.25
SFSWAP-203ENST00000535236 DPTQ07507 201 aa16.63■□□□□ 0.25
SFSWAP-203ENST00000535236 OPCMLQ14982 345 aa16.63■□□□□ 0.25
SFSWAP-203ENST00000535236 PRAMEF5Q5TYX0 476 aa16.63■□□□□ 0.25
SFSWAP-203ENST00000535236 PRAMEF6Q5VXH4 476 aa16.63■□□□□ 0.25
SFSWAP-203ENST00000535236 OR8G2PQ6IF36 304 aa16.63■□□□□ 0.25
SFSWAP-203ENST00000535236 NRARPQ7Z6K4 114 aa16.63■□□□□ 0.25
SFSWAP-203ENST00000535236 FAM185AQ8N0U4 392 aa16.63■□□□□ 0.25
SFSWAP-203ENST00000535236 GAB3Q8WWW8 586 aa16.63■□□□□ 0.25
SFSWAP-203ENST00000535236 C8orf44Q96CB5 159 aa16.63■□□□□ 0.25
SFSWAP-203ENST00000535236 SLC35E1Q96K37 410 aa16.63■□□□□ 0.25
SFSWAP-203ENST00000535236 BANF2Q9H503 90 aa16.63■□□□□ 0.25
SFSWAP-203ENST00000535236 FIGNL2A6NMB9 653 aa16.63■□□□□ 0.25
SFSWAP-203ENST00000535236 AQP7O14520 342 aa16.63■□□□□ 0.25
SFSWAP-203ENST00000535236 YIF1AO95070 293 aa16.63■□□□□ 0.25
SFSWAP-203ENST00000535236 MMP11P24347 488 aa16.63■□□□□ 0.25
SFSWAP-203ENST00000535236 UBALD2Q8IYN6 164 aa16.63■□□□□ 0.25
SFSWAP-203ENST00000535236 TCEAL7Q9BRU2 100 aa16.63■□□□□ 0.25
SFSWAP-203ENST00000535236 C1QTNF3Q9BXJ4 246 aa16.63■□□□□ 0.25
SFSWAP-203ENST00000535236 PLK3Q9H4B4 646 aa16.63■□□□□ 0.25
SFSWAP-203ENST00000535236 TAS2R5Q9NYW4 299 aa16.63■□□□□ 0.25
SFSWAP-203ENST00000535236 SH2D1BO14796 132 aa16.63■□□□□ 0.25
SFSWAP-203ENST00000535236 GPX2P18283 190 aa16.63■□□□□ 0.25
SFSWAP-203ENST00000535236 SELENBP1Q13228 472 aa16.63■□□□□ 0.25
SFSWAP-203ENST00000535236 Q6ZRG5 221 aa16.63■□□□□ 0.25
SFSWAP-203ENST00000535236 PATE1Q8WXA2 126 aa16.63■□□□□ 0.25
SFSWAP-203ENST00000535236 CORO2AQ92828 525 aa16.63■□□□□ 0.25
SFSWAP-203ENST00000535236 OR5M11Q96RB7 305 aa16.63■□□□□ 0.25
SFSWAP-203ENST00000535236 GON7Q9BXV9 100 aa16.63■□□□□ 0.25
SFSWAP-203ENST00000535236 PATZ1Q9HBE1 687 aaKnown RBP16.63■□□□□ 0.25
SFSWAP-203ENST00000535236 ASIC5Q9NY37 505 aa16.63■□□□□ 0.25
SFSWAP-203ENST00000535236 C7orf72A4D263 438 aa16.62■□□□□ 0.25
SFSWAP-203ENST00000535236 MKRN2OSH3BPM6 223 aa16.62■□□□□ 0.25
SFSWAP-203ENST00000535236 TXNL1O43396 289 aa16.62■□□□□ 0.25
SFSWAP-203ENST00000535236 DFFBO76075 338 aa16.62■□□□□ 0.25
SFSWAP-203ENST00000535236 SOD1P00441 154 aa16.62■□□□□ 0.25
SFSWAP-203ENST00000535236 PSMB3P49720 205 aa16.62■□□□□ 0.25
SFSWAP-203ENST00000535236 FAPQ12884 760 aa16.62■□□□□ 0.25
SFSWAP-203ENST00000535236 ADGRF3Q8IZF5 1079 aa16.62■□□□□ 0.25
SFSWAP-203ENST00000535236 OR51A4Q8NGJ6 313 aa16.62■□□□□ 0.25
SFSWAP-203ENST00000535236 OR51H1Q8NH63 302 aa16.62■□□□□ 0.25
SFSWAP-203ENST00000535236 PURGQ9UJV8 347 aaKnown RBP16.62■□□□□ 0.25
SFSWAP-203ENST00000535236 SLCO1B1Q9Y6L6 691 aa16.62■□□□□ 0.25
SFSWAP-203ENST00000535236 TRDV1A0A1B0GX56 115 aa16.62■□□□□ 0.25
SFSWAP-203ENST00000535236 C2orf76Q3KRA6 126 aa16.62■□□□□ 0.25
SFSWAP-203ENST00000535236 TMEM41BQ5BJD5 291 aa16.62■□□□□ 0.25
SFSWAP-203ENST00000535236 KDM4DQ6B0I6 523 aa16.62■□□□□ 0.25
SFSWAP-203ENST00000535236 OR2AE1Q8NHA4 323 aa16.62■□□□□ 0.25
SFSWAP-203ENST00000535236 BAHD1Q8TBE0 780 aaPredicted RBP16.62■□□□□ 0.25
SFSWAP-203ENST00000535236 RBFOX1Q9NWB1 397 aaKnown RBP16.62■□□□□ 0.25
SFSWAP-203ENST00000535236 MYO10Q9HD67 2058 aa16.62■□□□□ 0.25
SFSWAP-203ENST00000535236 PRRT4C9JH25 899 aa16.62■□□□□ 0.25
SFSWAP-203ENST00000535236 OIP5O43482 229 aa16.62■□□□□ 0.25
SFSWAP-203ENST00000535236 SAXO2Q658L1 398 aa16.62■□□□□ 0.25
SFSWAP-203ENST00000535236 FCRL6Q6DN72 434 aa16.62■□□□□ 0.25
SFSWAP-203ENST00000535236 HSD17B11Q8NBQ5 300 aa16.62■□□□□ 0.25
SFSWAP-203ENST00000535236 PMS2P2O95744 297 aa16.62■□□□□ 0.25
SFSWAP-203ENST00000535236 ATP1B1P05026 303 aa16.62■□□□□ 0.25
SFSWAP-203ENST00000535236 NID1P14543 1247 aa16.62■□□□□ 0.25
SFSWAP-203ENST00000535236 NKAIN4Q8IVV8 208 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms