RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 ADORA3P0DMS8 318 aa10.21□□□□□ -0.77
SVIP-205ENST00000533774 RPS2P15880 293 aaKnown RBP10.21□□□□□ -0.77
SVIP-205ENST00000533774 DSTNP60981 165 aa10.21□□□□□ -0.77
SVIP-205ENST00000533774 PPP1CBP62140 327 aa10.21□□□□□ -0.77
SVIP-205ENST00000533774 GNB2P62879 340 aa10.21□□□□□ -0.77
SVIP-205ENST00000533774 HSF2Q03933 536 aa10.21□□□□□ -0.77
SVIP-205ENST00000533774 PLP2Q04941 152 aa10.21□□□□□ -0.77
SVIP-205ENST00000533774 PSG7Q13046 419 aa10.21□□□□□ -0.77
SVIP-205ENST00000533774 GTDC1Q4AE62 458 aa10.21□□□□□ -0.77
SVIP-205ENST00000533774 MTX3Q5HYI7 312 aa10.21□□□□□ -0.77
SVIP-205ENST00000533774 GPR157Q5UAW9 335 aa10.21□□□□□ -0.77
SVIP-205ENST00000533774 TRIML2Q8N7C3 387 aa10.21□□□□□ -0.77
SVIP-205ENST00000533774 EPS8L3Q8TE67 593 aaKnown RBP10.21□□□□□ -0.77
SVIP-205ENST00000533774 C10orf82Q8WW14 230 aa10.21□□□□□ -0.77
SVIP-205ENST00000533774 SSMEM1Q8WWF3 244 aa10.21□□□□□ -0.77
SVIP-205ENST00000533774 SLC47A1Q96FL8 570 aa10.21□□□□□ -0.77
SVIP-205ENST00000533774 ZNF347Q96SE7 839 aa10.21□□□□□ -0.77
SVIP-205ENST00000533774 NANOGQ9H9S0 305 aa10.21□□□□□ -0.77
SVIP-205ENST00000533774 TAS2R5Q9NYW4 299 aa10.21□□□□□ -0.77
SVIP-205ENST00000533774 CALML5Q9NZT1 146 aa10.21□□□□□ -0.77
SVIP-205ENST00000533774 CENPVL3A0A0U1RRI6 287 aa10.2□□□□□ -0.78
SVIP-205ENST00000533774 A6NJY4 79 aa10.2□□□□□ -0.78
SVIP-205ENST00000533774 TPST1O60507 370 aa10.2□□□□□ -0.78
SVIP-205ENST00000533774 ALDOCP09972 364 aaKnown RBP10.2□□□□□ -0.78
SVIP-205ENST00000533774 BMP2P12643 396 aa10.2□□□□□ -0.78
SVIP-205ENST00000533774 ZNF32P17041 273 aa10.2□□□□□ -0.78
SVIP-205ENST00000533774 CDAP32320 146 aa10.2□□□□□ -0.78
SVIP-205ENST00000533774 LIPAP38571 399 aa10.2□□□□□ -0.78
SVIP-205ENST00000533774 CRATP43155 626 aa10.2□□□□□ -0.78
SVIP-205ENST00000533774 IER3P46695 156 aa10.2□□□□□ -0.78
SVIP-205ENST00000533774 CLNS1AP54105 237 aaKnown RBP10.2□□□□□ -0.78
SVIP-205ENST00000533774 PCBP3P57721 371 aaKnown RBP10.2□□□□□ -0.78
SVIP-205ENST00000533774 EGR3Q06889 387 aa10.2□□□□□ -0.78
SVIP-205ENST00000533774 DBPQ10586 325 aaPredicted RBP10.2□□□□□ -0.78
SVIP-205ENST00000533774 HIST3H3Q16695 136 aa10.2□□□□□ -0.78
SVIP-205ENST00000533774 DPY19L1Q2PZI1 675 aa10.2□□□□□ -0.78
SVIP-205ENST00000533774 FAM201AQ5SY85 155 aa10.2□□□□□ -0.78
SVIP-205ENST00000533774 DPPA2Q7Z7J5 298 aa10.2□□□□□ -0.78
SVIP-205ENST00000533774 OR2Z1Q8NG97 314 aa10.2□□□□□ -0.78
SVIP-205ENST00000533774 OR5J2Q8NH18 312 aa10.2□□□□□ -0.78
SVIP-205ENST00000533774 ZNF420Q8TAQ5 688 aaPredicted RBP10.2□□□□□ -0.78
SVIP-205ENST00000533774 ABHD4Q8TB40 342 aa10.2□□□□□ -0.78
SVIP-205ENST00000533774 DNAJA4Q8WW22 397 aaPredicted RBP10.2□□□□□ -0.78
SVIP-205ENST00000533774 MAL2Q969L2 176 aa10.2□□□□□ -0.78
SVIP-205ENST00000533774 SLC35B4Q969S0 331 aa10.2□□□□□ -0.78
SVIP-205ENST00000533774 MCHR2Q969V1 340 aa10.2□□□□□ -0.78
SVIP-205ENST00000533774 ZNF566Q969W8 418 aa10.2□□□□□ -0.78
SVIP-205ENST00000533774 NABP1Q96AH0 204 aa10.2□□□□□ -0.78
SVIP-205ENST00000533774 VPS33AQ96AX1 596 aa10.2□□□□□ -0.78
SVIP-205ENST00000533774 THOC1Q96FV9 657 aaKnown RBP10.2□□□□□ -0.78
SVIP-205ENST00000533774 SLC25A44Q96H78 314 aaPredicted RBP10.2□□□□□ -0.78
SVIP-205ENST00000533774 APOPT1Q96IL0 206 aa10.2□□□□□ -0.78
SVIP-205ENST00000533774 OR52E6Q96RD3 313 aa10.2□□□□□ -0.78
SVIP-205ENST00000533774 TBX15Q96SF7 602 aa10.2□□□□□ -0.78
SVIP-205ENST00000533774 TMEM246Q9BRR3 403 aa10.2□□□□□ -0.78
SVIP-205ENST00000533774 PPP1R3CQ9UQK1 317 aa10.2□□□□□ -0.78
SVIP-205ENST00000533774 IFT52Q9Y366 437 aa10.2□□□□□ -0.78
SVIP-205ENST00000533774 IGKV1D-43A0A0B4J1Z2 117 aa10.19□□□□□ -0.78
SVIP-205ENST00000533774 A0A0B4J2E0 115 aa10.19□□□□□ -0.78
SVIP-205ENST00000533774 A0A1B0GX12 115 aa10.19□□□□□ -0.78
SVIP-205ENST00000533774 TIMM8AO60220 97 aaPredicted RBP10.19□□□□□ -0.78
SVIP-205ENST00000533774 KRT75O95678 551 aa10.19□□□□□ -0.78
SVIP-205ENST00000533774 CYB5R3P00387 301 aaPredicted RBP10.19□□□□□ -0.78
SVIP-205ENST00000533774 MMP9P14780 707 aa10.19□□□□□ -0.78
SVIP-205ENST00000533774 ERFP50548 548 aa10.19□□□□□ -0.78
SVIP-205ENST00000533774 BPIFB3P59826 476 aa10.19□□□□□ -0.78
SVIP-205ENST00000533774 PSG4Q00888 419 aa10.19□□□□□ -0.78
SVIP-205ENST00000533774 RUNDC3AQ59EK9 446 aa10.19□□□□□ -0.78
SVIP-205ENST00000533774 SLC27A4Q6P1M0 643 aa10.19□□□□□ -0.78
SVIP-205ENST00000533774 ULK3Q6PHR2 472 aa10.19□□□□□ -0.78
SVIP-205ENST00000533774 LYPD2Q6UXB3 125 aa10.19□□□□□ -0.78
SVIP-205ENST00000533774 MUC20Q8N307 709 aaPredicted RBP10.19□□□□□ -0.78
SVIP-205ENST00000533774 C10orf53Q8N6V4 93 aa10.19□□□□□ -0.78
SVIP-205ENST00000533774 ZNF781Q8N8C0 355 aa10.19□□□□□ -0.78
SVIP-205ENST00000533774 HIPK4Q8NE63 616 aa10.19□□□□□ -0.78
SVIP-205ENST00000533774 TBC1D15Q8TC07 691 aa10.19□□□□□ -0.78
SVIP-205ENST00000533774 ZIM3Q96PE6 472 aa10.19□□□□□ -0.78
SVIP-205ENST00000533774 OR2V2Q96R30 315 aa10.19□□□□□ -0.78
SVIP-205ENST00000533774 PCGF1Q9BSM1 259 aa10.19□□□□□ -0.78
SVIP-205ENST00000533774 C20orf27Q9GZN8 174 aa10.19□□□□□ -0.78
SVIP-205ENST00000533774 WNT5BQ9H1J7 359 aa10.19□□□□□ -0.78
SVIP-205ENST00000533774 RASSF4Q9H2L5 321 aa10.19□□□□□ -0.78
SVIP-205ENST00000533774 ARMC7Q9H6L4 198 aa10.19□□□□□ -0.78
SVIP-205ENST00000533774 GCM1Q9NP62 436 aa10.19□□□□□ -0.78
SVIP-205ENST00000533774 MKS1Q9NXB0 559 aa10.19□□□□□ -0.78
SVIP-205ENST00000533774 CGGBP1Q9UFW8 167 aaPredicted RBP10.19□□□□□ -0.78
SVIP-205ENST00000533774 UGT2A1Q9Y4X1 527 aa10.19□□□□□ -0.78
SVIP-205ENST00000533774 A0A0U1RQK1 487 aa10.18□□□□□ -0.78
SVIP-205ENST00000533774 ZNF816-ZNF321PA0A0X1KG74 233 aa10.18□□□□□ -0.78
SVIP-205ENST00000533774 ICMTO60725 284 aa10.18□□□□□ -0.78
SVIP-205ENST00000533774 ENTPD5O75356 428 aa10.18□□□□□ -0.78
SVIP-205ENST00000533774 SPAG7O75391 227 aa10.18□□□□□ -0.78
SVIP-205ENST00000533774 TNFRSF1AP19438 455 aa10.18□□□□□ -0.78
SVIP-205ENST00000533774 SERPINB5P36952 375 aa10.18□□□□□ -0.78
SVIP-205ENST00000533774 CFHR2P36980 270 aa10.18□□□□□ -0.78
SVIP-205ENST00000533774 CDH12P55289 794 aa10.18□□□□□ -0.78
SVIP-205ENST00000533774 OR1Q1Q15612 314 aa10.18□□□□□ -0.78
SVIP-205ENST00000533774 NRN1LQ496H8 165 aa10.18□□□□□ -0.78
SVIP-205ENST00000533774 FAM91A1Q658Y4 838 aa10.18□□□□□ -0.78
SVIP-205ENST00000533774 ZNF841Q6ZN19 808 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms