RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 C19orf57Q0VDD7 668 aa13.75□□□□□ -0.21
CACNA1E-208ENST00000533229 FOXF1Q12946 379 aa13.75□□□□□ -0.21
CACNA1E-208ENST00000533229 INPP5JQ15735 1006 aaPredicted RBP13.75□□□□□ -0.21
CACNA1E-208ENST00000533229 LINC00303Q3SY05 128 aa13.75□□□□□ -0.21
CACNA1E-208ENST00000533229 FAM69BQ5VUD6 431 aa13.75□□□□□ -0.21
CACNA1E-208ENST00000533229 SEZ6L2Q6UXD5 910 aa13.75□□□□□ -0.21
CACNA1E-208ENST00000533229 CREB3L2Q70SY1 520 aa13.75□□□□□ -0.21
CACNA1E-208ENST00000533229 CATSPERDQ86XM0 798 aa13.75□□□□□ -0.21
CACNA1E-208ENST00000533229 PLPP7Q8NBV4 271 aa13.75□□□□□ -0.21
CACNA1E-208ENST00000533229 ZNF431Q8TF32 576 aaPredicted RBP13.75□□□□□ -0.21
CACNA1E-208ENST00000533229 ASB10Q8WXI3 467 aa13.75□□□□□ -0.21
CACNA1E-208ENST00000533229 ST8SIA1Q92185 356 aa13.75□□□□□ -0.21
CACNA1E-208ENST00000533229 IRF2BPLQ9H1B7 796 aa13.75□□□□□ -0.21
CACNA1E-208ENST00000533229 APMAPQ9HDC9 416 aa13.75□□□□□ -0.21
CACNA1E-208ENST00000533229 PPIEQ9UNP9 301 aaKnown RBP13.75□□□□□ -0.21
CACNA1E-208ENST00000533229 TMA7Q9Y2S6 64 aaKnown RBP13.75□□□□□ -0.21
CACNA1E-208ENST00000533229 PCDHGA5Q9Y5G8 931 aa13.75□□□□□ -0.21
CACNA1E-208ENST00000533229 TRIOBPQ9H2D6 2365 aa13.74□□□□□ -0.21
CACNA1E-208ENST00000533229 IGHV5-10-1A0A0J9YXX1 117 aa13.74□□□□□ -0.21
CACNA1E-208ENST00000533229 H3BML4 177 aa13.74□□□□□ -0.21
CACNA1E-208ENST00000533229 ARPC1BO15143 372 aaKnown RBP13.74□□□□□ -0.21
CACNA1E-208ENST00000533229 SRSF10O75494 262 aaKnown RBP13.74□□□□□ -0.21
CACNA1E-208ENST00000533229 KDM4BO94953 1096 aa13.74□□□□□ -0.21
CACNA1E-208ENST00000533229 ALDOBP05062 364 aa13.74□□□□□ -0.21
CACNA1E-208ENST00000533229 FOSL2P15408 326 aa13.74□□□□□ -0.21
CACNA1E-208ENST00000533229 CRABP1P29762 137 aa13.74□□□□□ -0.21
CACNA1E-208ENST00000533229 PTGS2P35354 604 aa13.74□□□□□ -0.21
CACNA1E-208ENST00000533229 POU3F4P49335 361 aa13.74□□□□□ -0.21
CACNA1E-208ENST00000533229 SELENOPP49908 381 aa13.74□□□□□ -0.21
CACNA1E-208ENST00000533229 RIDAP52758 137 aaKnown RBP13.74□□□□□ -0.21
CACNA1E-208ENST00000533229 MRPS10P82664 201 aaKnown RBP13.74□□□□□ -0.21
CACNA1E-208ENST00000533229 CAMK2DQ13557 499 aa13.74□□□□□ -0.21
CACNA1E-208ENST00000533229 C2orf76Q3KRA6 126 aa13.74□□□□□ -0.21
CACNA1E-208ENST00000533229 ELFN2Q5R3F8 820 aa13.74□□□□□ -0.21
CACNA1E-208ENST00000533229 ZNF385CQ66K41 422 aaPredicted RBP13.74□□□□□ -0.21
CACNA1E-208ENST00000533229 OLFML2AQ68BL7 652 aa13.74□□□□□ -0.21
CACNA1E-208ENST00000533229 ANKRD16Q6P6B7 361 aa13.74□□□□□ -0.21
CACNA1E-208ENST00000533229 KCTD18Q6PI47 426 aaPredicted RBP13.74□□□□□ -0.21
CACNA1E-208ENST00000533229 C5orf46Q6UWT4 87 aa13.74□□□□□ -0.21
CACNA1E-208ENST00000533229 H1FNTQ75WM6 255 aaPredicted RBP13.74□□□□□ -0.21
CACNA1E-208ENST00000533229 FGD2Q7Z6J4 655 aa13.74□□□□□ -0.21
CACNA1E-208ENST00000533229 LINC00346Q8IVM7 164 aa13.74□□□□□ -0.21
CACNA1E-208ENST00000533229 ZNF248Q8NDW4 579 aa13.74□□□□□ -0.21
CACNA1E-208ENST00000533229 SLC26A10Q8NG04 563 aa13.74□□□□□ -0.21
CACNA1E-208ENST00000533229 OR52N5Q8NH56 324 aa13.74□□□□□ -0.21
CACNA1E-208ENST00000533229 MFSD8Q8NHS3 518 aa13.74□□□□□ -0.21
CACNA1E-208ENST00000533229 NAP1L6A6NFF2 107 aa13.73□□□□□ -0.21
CACNA1E-208ENST00000533229 SIGLEC6O43699 453 aa13.73□□□□□ -0.21
CACNA1E-208ENST00000533229 GDF9O60383 454 aa13.73□□□□□ -0.21
CACNA1E-208ENST00000533229 LDOC1O95751 146 aaPredicted RBP13.73□□□□□ -0.21
CACNA1E-208ENST00000533229 CFPP27918 469 aa13.73□□□□□ -0.21
CACNA1E-208ENST00000533229 APOBEC1P41238 236 aaKnown RBP13.73□□□□□ -0.21
CACNA1E-208ENST00000533229 RAD52P43351 418 aa13.73□□□□□ -0.21
CACNA1E-208ENST00000533229 DHPSP49366 369 aaPredicted RBP13.73□□□□□ -0.21
CACNA1E-208ENST00000533229 EMP2P54851 167 aa13.73□□□□□ -0.21
CACNA1E-208ENST00000533229 DCDP81605 110 aaKnown RBP13.73□□□□□ -0.21
CACNA1E-208ENST00000533229 POU3F1Q03052 451 aaPredicted RBP13.73□□□□□ -0.21
CACNA1E-208ENST00000533229 ZP4Q12836 540 aa13.73□□□□□ -0.21
CACNA1E-208ENST00000533229 TMEM225Q6GV28 225 aa13.73□□□□□ -0.21
CACNA1E-208ENST00000533229 FAM166AQ6J272 317 aa13.73□□□□□ -0.21
CACNA1E-208ENST00000533229 KCNK17Q96T54 332 aa13.73□□□□□ -0.21
CACNA1E-208ENST00000533229 SPSB2Q99619 263 aa13.73□□□□□ -0.21
CACNA1E-208ENST00000533229 RANBP3Q9H6Z4 567 aaPredicted RBP13.73□□□□□ -0.21
CACNA1E-208ENST00000533229 NOX3Q9HBY0 568 aa13.73□□□□□ -0.21
CACNA1E-208ENST00000533229 DLL4Q9NR61 685 aa13.73□□□□□ -0.21
CACNA1E-208ENST00000533229 EMC9Q9Y3B6 208 aa13.73□□□□□ -0.21
CACNA1E-208ENST00000533229 COL6A3P12111 3177 aa13.73□□□□□ -0.21
CACNA1E-208ENST00000533229 CPAMD8Q8IZJ3 1885 aa13.73□□□□□ -0.21
CACNA1E-208ENST00000533229 CIB4A0PJX0 185 aa13.73□□□□□ -0.21
CACNA1E-208ENST00000533229 GGT3PA6NGU5 568 aa13.73□□□□□ -0.21
CACNA1E-208ENST00000533229 G3V3Q6 166 aa13.73□□□□□ -0.21
CACNA1E-208ENST00000533229 TSC22D2O75157 780 aa13.73□□□□□ -0.21
CACNA1E-208ENST00000533229 PTGDSP41222 190 aa13.73□□□□□ -0.21
CACNA1E-208ENST00000533229 MAP2K6P52564 334 aa13.73□□□□□ -0.21
CACNA1E-208ENST00000533229 SCAND1P57086 179 aa13.73□□□□□ -0.21
CACNA1E-208ENST00000533229 GUCA2AQ02747 115 aa13.73□□□□□ -0.21
CACNA1E-208ENST00000533229 FAM209AQ5JX71 171 aa13.73□□□□□ -0.21
CACNA1E-208ENST00000533229 CORO6Q6QEF8 472 aa13.73□□□□□ -0.21
CACNA1E-208ENST00000533229 DCXRQ7Z4W1 244 aa13.73□□□□□ -0.21
CACNA1E-208ENST00000533229 BPHLQ86WA6 291 aaPredicted RBP13.73□□□□□ -0.21
CACNA1E-208ENST00000533229 OR1J4Q8NGS1 313 aa13.73□□□□□ -0.21
CACNA1E-208ENST00000533229 ST7LQ8TDW4 575 aa13.73□□□□□ -0.21
CACNA1E-208ENST00000533229 RNF138Q8WVD3 245 aa13.73□□□□□ -0.21
CACNA1E-208ENST00000533229 FAM3DQ96BQ1 224 aa13.73□□□□□ -0.21
CACNA1E-208ENST00000533229 SEC22CQ9BRL7 303 aa13.73□□□□□ -0.21
CACNA1E-208ENST00000533229 EMC6Q9BV81 110 aa13.73□□□□□ -0.21
CACNA1E-208ENST00000533229 DHDHQ9UQ10 334 aa13.73□□□□□ -0.21
CACNA1E-208ENST00000533229 SIT1Q9Y3P8 196 aa13.73□□□□□ -0.21
CACNA1E-208ENST00000533229 LOC101059948A0A1B0GTJ6 334 aa13.72□□□□□ -0.21
CACNA1E-208ENST00000533229 VSTM2BA6NLU5 285 aa13.72□□□□□ -0.21
CACNA1E-208ENST00000533229 NPIPA5E9PKD4 350 aa13.72□□□□□ -0.21
CACNA1E-208ENST00000533229 SLC17A2O00624 439 aa13.72□□□□□ -0.21
CACNA1E-208ENST00000533229 TGM6O95932 706 aa13.72□□□□□ -0.21
CACNA1E-208ENST00000533229 OPN1LWP04000 364 aa13.72□□□□□ -0.21
CACNA1E-208ENST00000533229 PNLIPP16233 465 aa13.72□□□□□ -0.21
CACNA1E-208ENST00000533229 ANXA7P20073 488 aaKnown RBP13.72□□□□□ -0.21
CACNA1E-208ENST00000533229 FOXK1P85037 733 aa13.72□□□□□ -0.21
CACNA1E-208ENST00000533229 TLE3Q04726 772 aa13.72□□□□□ -0.21
CACNA1E-208ENST00000533229 SQSTM1Q13501 440 aa13.72□□□□□ -0.21
CACNA1E-208ENST00000533229 OR4D10Q8NGI6 311 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms