RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 ST3GAL2Q16842 350 aa16.43■□□□□ 0.22
SMPD1-208ENST00000533123 LINC00299Q6ZSB3 139 aa16.43■□□□□ 0.22
SMPD1-208ENST00000533123 CADM3Q8N126 398 aa16.43■□□□□ 0.22
SMPD1-208ENST00000533123 SARAFQ96BY9 339 aa16.43■□□□□ 0.22
SMPD1-208ENST00000533123 TXNDC15Q96J42 360 aa16.43■□□□□ 0.22
SMPD1-208ENST00000533123 WDR76Q9H967 626 aa16.43■□□□□ 0.22
SMPD1-208ENST00000533123 FANCFQ9NPI8 374 aa16.43■□□□□ 0.22
SMPD1-208ENST00000533123 CCDC59Q9P031 241 aaKnown RBP16.43■□□□□ 0.22
SMPD1-208ENST00000533123 KLHDC2Q9Y2U9 406 aa16.43■□□□□ 0.22
SMPD1-208ENST00000533123 PSMD9O00233 223 aa16.42■□□□□ 0.22
SMPD1-208ENST00000533123 DVL2O14641 736 aa16.42■□□□□ 0.22
SMPD1-208ENST00000533123 RPS27P42677 84 aaKnown RBP16.42■□□□□ 0.22
SMPD1-208ENST00000533123 BDH1Q02338 343 aa16.42■□□□□ 0.22
SMPD1-208ENST00000533123 ETFDHQ16134 617 aa16.42■□□□□ 0.22
SMPD1-208ENST00000533123 ZNF404Q494X3 552 aa16.42■□□□□ 0.22
SMPD1-208ENST00000533123 CD200R1LQ6Q8B3 271 aa16.42■□□□□ 0.22
SMPD1-208ENST00000533123 ARL9Q6T311 187 aa16.42■□□□□ 0.22
SMPD1-208ENST00000533123 CHMP1BQ7LBR1 199 aa16.42■□□□□ 0.22
SMPD1-208ENST00000533123 SNX29P2Q8IUI4 249 aa16.42■□□□□ 0.22
SMPD1-208ENST00000533123 TIGD4Q8IY51 512 aa16.42■□□□□ 0.22
SMPD1-208ENST00000533123 OR5M9Q8NGP3 310 aa16.42■□□□□ 0.22
SMPD1-208ENST00000533123 OR6Q1Q8NGQ2 317 aa16.42■□□□□ 0.22
SMPD1-208ENST00000533123 OXGR1Q96P68 337 aa16.42■□□□□ 0.22
SMPD1-208ENST00000533123 PRDM14Q9GZV8 571 aa16.42■□□□□ 0.22
SMPD1-208ENST00000533123 ITGB1BP2Q9UKP3 347 aa16.42■□□□□ 0.22
SMPD1-208ENST00000533123 KALRNO60229 2985 aa16.42■□□□□ 0.22
SMPD1-208ENST00000533123 SLC16A7O60669 478 aa16.42■□□□□ 0.22
SMPD1-208ENST00000533123 SFTPCP11686 197 aa16.42■□□□□ 0.22
SMPD1-208ENST00000533123 CTLA4P16410 223 aa16.42■□□□□ 0.22
SMPD1-208ENST00000533123 MXD1Q05195 221 aa16.42■□□□□ 0.22
SMPD1-208ENST00000533123 C1QTNF12Q5T7M4 302 aa16.42■□□□□ 0.22
SMPD1-208ENST00000533123 PLEKHG7Q6ZR37 379 aa16.42■□□□□ 0.22
SMPD1-208ENST00000533123 FGD2Q7Z6J4 655 aa16.42■□□□□ 0.22
SMPD1-208ENST00000533123 UEVLDQ8IX04 471 aa16.42■□□□□ 0.22
SMPD1-208ENST00000533123 FNDC9Q8TBE3 224 aa16.42■□□□□ 0.22
SMPD1-208ENST00000533123 SNX33Q8WV41 574 aa16.42■□□□□ 0.22
SMPD1-208ENST00000533123 S100ZQ8WXG8 99 aa16.42■□□□□ 0.22
SMPD1-208ENST00000533123 ASB10Q8WXI3 467 aa16.42■□□□□ 0.22
SMPD1-208ENST00000533123 ASF1BQ9NVP2 202 aa16.42■□□□□ 0.22
SMPD1-208ENST00000533123 VSX1Q9NZR4 365 aaPredicted RBP16.42■□□□□ 0.22
SMPD1-208ENST00000533123 GNG8Q9UK08 70 aa16.42■□□□□ 0.22
SMPD1-208ENST00000533123 B9D1Q9UPM9 204 aa16.42■□□□□ 0.22
SMPD1-208ENST00000533123 RASD1Q9Y272 281 aa16.42■□□□□ 0.22
SMPD1-208ENST00000533123 SLC22A23A1A5C7 686 aa16.41■□□□□ 0.22
SMPD1-208ENST00000533123 CD8B2A6NJW9 211 aa16.41■□□□□ 0.22
SMPD1-208ENST00000533123 CD8BP10966 210 aa16.41■□□□□ 0.22
SMPD1-208ENST00000533123 PSKH1P11801 424 aa16.41■□□□□ 0.22
SMPD1-208ENST00000533123 ZNF43P17038 809 aa16.41■□□□□ 0.22
SMPD1-208ENST00000533123 TGM4P49221 684 aa16.41■□□□□ 0.22
SMPD1-208ENST00000533123 CDONQ4KMG0 1287 aa16.41■□□□□ 0.22
SMPD1-208ENST00000533123 KRTCAP3Q53RY4 240 aa16.41■□□□□ 0.22
SMPD1-208ENST00000533123 SLC35D2Q76EJ3 337 aa16.41■□□□□ 0.22
SMPD1-208ENST00000533123 FCRLAQ7L513 359 aa16.41■□□□□ 0.22
SMPD1-208ENST00000533123 SLC16A9Q7RTY1 509 aa16.41■□□□□ 0.22
SMPD1-208ENST00000533123 MFSD4AQ8N468 514 aa16.41■□□□□ 0.22
SMPD1-208ENST00000533123 MINDY2Q8NBR6 621 aa16.41■□□□□ 0.22
SMPD1-208ENST00000533123 ABHD3Q8WU67 409 aa16.41■□□□□ 0.22
SMPD1-208ENST00000533123 PELI1Q96FA3 418 aa16.41■□□□□ 0.22
SMPD1-208ENST00000533123 DACH2Q96NX9 599 aa16.41■□□□□ 0.22
SMPD1-208ENST00000533123 EMC6Q9BV81 110 aa16.41■□□□□ 0.22
SMPD1-208ENST00000533123 C6orf62Q9GZU0 229 aaPredicted RBP16.41■□□□□ 0.22
SMPD1-208ENST00000533123 TPK1Q9H3S4 243 aa16.41■□□□□ 0.22
SMPD1-208ENST00000533123 SNTG1Q9NSN8 517 aa16.41■□□□□ 0.22
SMPD1-208ENST00000533123 ACOXLQ9NUZ1 547 aa16.41■□□□□ 0.22
SMPD1-208ENST00000533123 PAQR5Q9NXK6 330 aaPredicted RBP16.41■□□□□ 0.22
SMPD1-208ENST00000533123 CLEC2LP0C7M8 214 aa16.41■□□□□ 0.22
SMPD1-208ENST00000533123 ACTA2P62736 377 aa16.41■□□□□ 0.22
SMPD1-208ENST00000533123 ACTG2P63267 376 aa16.41■□□□□ 0.22
SMPD1-208ENST00000533123 SLC3A1Q07837 685 aa16.41■□□□□ 0.22
SMPD1-208ENST00000533123 SLC17A1Q14916 467 aa16.41■□□□□ 0.22
SMPD1-208ENST00000533123 NHLRC1Q6VVB1 395 aa16.41■□□□□ 0.22
SMPD1-208ENST00000533123 ZNF775Q96BV0 537 aaPredicted RBP16.41■□□□□ 0.22
SMPD1-208ENST00000533123 BARHL1Q9BZE3 327 aa16.41■□□□□ 0.22
SMPD1-208ENST00000533123 MCTS1Q9ULC4 181 aaKnown RBP16.41■□□□□ 0.22
SMPD1-208ENST00000533123 LOC102725191A0A1B0GVB3 256 aa16.4■□□□□ 0.22
SMPD1-208ENST00000533123 TRDV1A0A1B0GX56 115 aa16.4■□□□□ 0.22
SMPD1-208ENST00000533123 SMIM30A4D0T7 59 aa16.4■□□□□ 0.22
SMPD1-208ENST00000533123 GABRPO00591 440 aa16.4■□□□□ 0.22
SMPD1-208ENST00000533123 CDRT1O95170 752 aa16.4■□□□□ 0.22
SMPD1-208ENST00000533123 VAMP5O95183 116 aa16.4■□□□□ 0.22
SMPD1-208ENST00000533123 SYNGR4O95473 234 aa16.4■□□□□ 0.22
SMPD1-208ENST00000533123 CENPAP49450 140 aa16.4■□□□□ 0.22
SMPD1-208ENST00000533123 FMODQ06828 376 aa16.4■□□□□ 0.22
SMPD1-208ENST00000533123 TMEM53Q6P2H8 277 aa16.4■□□□□ 0.22
SMPD1-208ENST00000533123 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.4■□□□□ 0.22
SMPD1-208ENST00000533123 ZGRF1Q86YA3 2104 aa16.4■□□□□ 0.22
SMPD1-208ENST00000533123 PRRG4Q9BZD6 226 aa16.4■□□□□ 0.22
SMPD1-208ENST00000533123 NXF2Q9GZY0 626 aaKnown RBP16.4■□□□□ 0.22
SMPD1-208ENST00000533123 ING1Q9UK53 422 aaPredicted RBP16.4■□□□□ 0.22
SMPD1-208ENST00000533123 IGLV1-36A0A0B4J1U3 117 aa16.39■□□□□ 0.22
SMPD1-208ENST00000533123 OR14I1A6ND48 311 aa16.39■□□□□ 0.22
SMPD1-208ENST00000533123 TTLL8A6PVC2 850 aa16.39■□□□□ 0.22
SMPD1-208ENST00000533123 TRAF3IP2O43734 574 aaPredicted RBP16.39■□□□□ 0.22
SMPD1-208ENST00000533123 AQP8O94778 261 aa16.39■□□□□ 0.22
SMPD1-208ENST00000533123 DAP3P51398 398 aaKnown RBP16.39■□□□□ 0.22
SMPD1-208ENST00000533123 TDGF1P3P51864 188 aa16.39■□□□□ 0.22
SMPD1-208ENST00000533123 TMEM91Q6ZNR0 172 aa16.39■□□□□ 0.22
SMPD1-208ENST00000533123 SYS1Q8N2H4 156 aa16.39■□□□□ 0.22
SMPD1-208ENST00000533123 OR9K2Q8NGE7 335 aa16.39■□□□□ 0.22
SMPD1-208ENST00000533123 OR6N2Q8NGY6 317 aa16.39■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms