RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 A0A1W2PPL8 197 aa26.03■■□□□ 1.76
SSSCA1-207ENST00000533115 M0R233 179 aa26.03■■□□□ 1.76
SSSCA1-207ENST00000533115 XKRYO14609 159 aa26.03■■□□□ 1.76
SSSCA1-207ENST00000533115 AHCYL1O43865 530 aa26.03■■□□□ 1.76
SSSCA1-207ENST00000533115 GADD45GO95257 159 aa26.03■■□□□ 1.76
SSSCA1-207ENST00000533115 CST2P09228 141 aa26.03■■□□□ 1.76
SSSCA1-207ENST00000533115 DAOP14920 347 aa26.03■■□□□ 1.76
SSSCA1-207ENST00000533115 LAP3P28838 519 aa26.03■■□□□ 1.76
SSSCA1-207ENST00000533115 NR4A2P43354 598 aa26.03■■□□□ 1.76
SSSCA1-207ENST00000533115 SPIBQ01892 262 aa26.03■■□□□ 1.76
SSSCA1-207ENST00000533115 RGS7BPQ6MZT1 257 aaPredicted RBP26.03■■□□□ 1.76
SSSCA1-207ENST00000533115 NSL1Q96IY1 281 aa26.03■■□□□ 1.76
SSSCA1-207ENST00000533115 FOXN4Q96NZ1 517 aa26.03■■□□□ 1.76
SSSCA1-207ENST00000533115 DUSP13Q9UII6 198 aa26.03■■□□□ 1.76
SSSCA1-207ENST00000533115 UNC119BA6NIH7 251 aa26.02■■□□□ 1.76
SSSCA1-207ENST00000533115 B2RBV5 119 aa26.02■■□□□ 1.76
SSSCA1-207ENST00000533115 FABP3P05413 133 aa26.02■■□□□ 1.76
SSSCA1-207ENST00000533115 RAD52P43351 418 aa26.02■■□□□ 1.76
SSSCA1-207ENST00000533115 PSG4Q00888 419 aa26.02■■□□□ 1.76
SSSCA1-207ENST00000533115 GPX7Q96SL4 187 aaPredicted RBP26.02■■□□□ 1.76
SSSCA1-207ENST00000533115 OR51B6Q9H340 312 aa26.02■■□□□ 1.76
SSSCA1-207ENST00000533115 TPK1Q9H3S4 243 aa26.02■■□□□ 1.76
SSSCA1-207ENST00000533115 MS4A5Q9H3V2 200 aa26.02■■□□□ 1.76
SSSCA1-207ENST00000533115 NRIP3Q9NQ35 241 aa26.02■■□□□ 1.76
SSSCA1-207ENST00000533115 YAE1D1Q9NRH1 226 aa26.02■■□□□ 1.76
SSSCA1-207ENST00000533115 MYEF2Q9P2K5 600 aaKnown RBP26.02■■□□□ 1.76
SSSCA1-207ENST00000533115 STOMP27105 288 aa26.01■■□□□ 1.75
SSSCA1-207ENST00000533115 ALDH3B1P43353 468 aa26.01■■□□□ 1.75
SSSCA1-207ENST00000533115 UCP2P55851 309 aa26.01■■□□□ 1.75
SSSCA1-207ENST00000533115 GPR139Q6DWJ6 353 aa26.01■■□□□ 1.75
SSSCA1-207ENST00000533115 THSD4Q6ZMP0 1018 aa26.01■■□□□ 1.75
SSSCA1-207ENST00000533115 CCDC197Q8NCU1 140 aa26.01■■□□□ 1.75
SSSCA1-207ENST00000533115 AKR7LQ8NHP1 331 aa26.01■■□□□ 1.75
SSSCA1-207ENST00000533115 GPA33Q99795 319 aa26.01■■□□□ 1.75
SSSCA1-207ENST00000533115 BCL2L14Q9BZR8 327 aa26.01■■□□□ 1.75
SSSCA1-207ENST00000533115 IL1RAPQ9NPH3 570 aa26.01■■□□□ 1.75
SSSCA1-207ENST00000533115 IL20RAQ9UHF4 553 aa26.01■■□□□ 1.75
SSSCA1-207ENST00000533115 TEX13CA0A0J9YWL9 993 aa26■■□□□ 1.75
SSSCA1-207ENST00000533115 PRSS37A4D1T9 235 aa26■■□□□ 1.75
SSSCA1-207ENST00000533115 STAMBPO95630 424 aa26■■□□□ 1.75
SSSCA1-207ENST00000533115 LCKP06239 509 aa26■■□□□ 1.75
SSSCA1-207ENST00000533115 MSR1P21757 451 aa26■■□□□ 1.75
SSSCA1-207ENST00000533115 SDHAP31040 664 aa26■■□□□ 1.75
SSSCA1-207ENST00000533115 FXYD6P3P58550 94 aa26■■□□□ 1.75
SSSCA1-207ENST00000533115 PCBD1P61457 104 aa26■■□□□ 1.75
SSSCA1-207ENST00000533115 KRR1Q13601 381 aaKnown RBP26■■□□□ 1.75
SSSCA1-207ENST00000533115 GGTLC2Q14390 218 aa26■■□□□ 1.75
SSSCA1-207ENST00000533115 ZNF540Q8NDQ6 660 aa26■■□□□ 1.75
SSSCA1-207ENST00000533115 RASD2Q96D21 266 aa26■■□□□ 1.75
SSSCA1-207ENST00000533115 POM121L2Q96KW2 1035 aa26■■□□□ 1.75
SSSCA1-207ENST00000533115 OR2H1Q9GZK4 316 aa26■■□□□ 1.75
SSSCA1-207ENST00000533115 POLE4Q9NR33 117 aa26■■□□□ 1.75
SSSCA1-207ENST00000533115 TIMM10BQ9Y5J6 103 aa26■■□□□ 1.75
SSSCA1-207ENST00000533115 JMJD1CQ15652 2540 aa26■■□□□ 1.75
SSSCA1-207ENST00000533115 RTTNQ86VV8 2226 aa26■■□□□ 1.75
SSSCA1-207ENST00000533115 CHD3Q12873 2000 aaKnown RBP26■■□□□ 1.75
SSSCA1-207ENST00000533115 YLPM1P49750 1951 aaKnown RBP26■■□□□ 1.75
SSSCA1-207ENST00000533115 A0A1W2PPW3 197 aa25.99■■□□□ 1.75
SSSCA1-207ENST00000533115 CRLF1O75462 422 aa25.99■■□□□ 1.75
SSSCA1-207ENST00000533115 CCNOP22674 350 aa25.99■■□□□ 1.75
SSSCA1-207ENST00000533115 MAD2L1BPQ15013 274 aaPredicted RBP25.99■■□□□ 1.75
SSSCA1-207ENST00000533115 DPY19L2P2Q6ZN68 376 aa25.99■■□□□ 1.75
SSSCA1-207ENST00000533115 ZER1Q7Z7L7 766 aa25.99■■□□□ 1.75
SSSCA1-207ENST00000533115 ZDHHC21Q8IVQ6 265 aa25.99■■□□□ 1.75
SSSCA1-207ENST00000533115 ZNF786Q8N393 782 aa25.99■■□□□ 1.75
SSSCA1-207ENST00000533115 UBASH3BQ8TF42 649 aa25.99■■□□□ 1.75
SSSCA1-207ENST00000533115 C11orf40Q8WZ69 217 aa25.99■■□□□ 1.75
SSSCA1-207ENST00000533115 ZNF416Q9BWM5 594 aa25.99■■□□□ 1.75
SSSCA1-207ENST00000533115 WNT5BQ9H1J7 359 aa25.99■■□□□ 1.75
SSSCA1-207ENST00000533115 ACTR3BQ9P1U1 418 aa25.99■■□□□ 1.75
SSSCA1-207ENST00000533115 IER3IP1Q9Y5U9 82 aa25.99■■□□□ 1.75
SSSCA1-207ENST00000533115 SCG5P05408 212 aa25.98■■□□□ 1.75
SSSCA1-207ENST00000533115 ZNF250P15622 560 aa25.98■■□□□ 1.75
SSSCA1-207ENST00000533115 RRM2P31350 389 aa25.98■■□□□ 1.75
SSSCA1-207ENST00000533115 SELENOVP59797 346 aa25.98■■□□□ 1.75
SSSCA1-207ENST00000533115 ERVS71-1P61550 626 aa25.98■■□□□ 1.75
SSSCA1-207ENST00000533115 ENDOGQ14249 297 aaKnown RBP25.98■■□□□ 1.75
SSSCA1-207ENST00000533115 SMARCD3Q6STE5 483 aa25.98■■□□□ 1.75
SSSCA1-207ENST00000533115 CYP2R1Q6VVX0 501 aa25.98■■□□□ 1.75
SSSCA1-207ENST00000533115 ALDH16A1Q8IZ83 802 aa25.98■■□□□ 1.75
SSSCA1-207ENST00000533115 ARHGAP24Q8N264 748 aa25.98■■□□□ 1.75
SSSCA1-207ENST00000533115 SYNPRQ8TBG9 265 aa25.98■■□□□ 1.75
SSSCA1-207ENST00000533115 BPESC1Q9GZL8 116 aa25.98■■□□□ 1.75
SSSCA1-207ENST00000533115 LOC100509620A0A075B734 347 aa25.97■■□□□ 1.75
SSSCA1-207ENST00000533115 C5orf49A4QMS7 147 aa25.97■■□□□ 1.75
SSSCA1-207ENST00000533115 C12orf71A8MTZ7 269 aa25.97■■□□□ 1.75
SSSCA1-207ENST00000533115 CLPTM1O96005 669 aa25.97■■□□□ 1.75
SSSCA1-207ENST00000533115 CALB2P22676 271 aa25.97■■□□□ 1.75
SSSCA1-207ENST00000533115 GIFP27352 417 aa25.97■■□□□ 1.75
SSSCA1-207ENST00000533115 GDI2P50395 445 aaKnown RBP25.97■■□□□ 1.75
SSSCA1-207ENST00000533115 RPS6KA3P51812 740 aa25.97■■□□□ 1.75
SSSCA1-207ENST00000533115 KLF3P57682 345 aaPredicted RBP25.97■■□□□ 1.75
SSSCA1-207ENST00000533115 C6orf52Q5T4I8 152 aa25.97■■□□□ 1.75
SSSCA1-207ENST00000533115 SYT9Q86SS6 491 aa25.97■■□□□ 1.75
SSSCA1-207ENST00000533115 ICA1LQ8NDH6 482 aa25.97■■□□□ 1.75
SSSCA1-207ENST00000533115 VSX1Q9NZR4 365 aaPredicted RBP25.97■■□□□ 1.75
SSSCA1-207ENST00000533115 TMCC3Q9ULS5 477 aa25.97■■□□□ 1.75
SSSCA1-207ENST00000533115 IGLV3-9A0A075B6K5 115 aa25.96■■□□□ 1.75
SSSCA1-207ENST00000533115 A8MV72 311 aaPredicted RBP25.96■■□□□ 1.75
SSSCA1-207ENST00000533115 SOCS2O14508 198 aa25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms