RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 ATXN7L3Q14CW9 347 aaPredicted RBP7.19□□□□□ -1.26
CTNND1-230ENST00000532245 NDUFA5Q16718 116 aa7.19□□□□□ -1.26
CTNND1-230ENST00000532245 GSG1Q2KHT4 349 aa7.19□□□□□ -1.26
CTNND1-230ENST00000532245 LRRC37A5PQ49AS3 106 aa7.19□□□□□ -1.26
CTNND1-230ENST00000532245 C9orf152Q5JTZ5 239 aa7.19□□□□□ -1.26
CTNND1-230ENST00000532245 SLC35D3Q5M8T2 416 aa7.19□□□□□ -1.26
CTNND1-230ENST00000532245 INO80EQ8NBZ0 244 aaPredicted RBP7.19□□□□□ -1.26
CTNND1-230ENST00000532245 CHDHQ8NE62 594 aaPredicted RBP7.19□□□□□ -1.26
CTNND1-230ENST00000532245 OR4K15Q8NH41 348 aa7.19□□□□□ -1.26
CTNND1-230ENST00000532245 OR51E1Q8TCB6 317 aa7.19□□□□□ -1.26
CTNND1-230ENST00000532245 GHSRQ92847 366 aa7.19□□□□□ -1.26
CTNND1-230ENST00000532245 HRASLS5Q96KN8 279 aa7.19□□□□□ -1.26
CTNND1-230ENST00000532245 SELENOIQ9C0D9 397 aa7.19□□□□□ -1.26
CTNND1-230ENST00000532245 ING1Q9UK53 422 aaPredicted RBP7.19□□□□□ -1.26
CTNND1-230ENST00000532245 EXO1Q9UQ84 846 aaKnown RBP7.19□□□□□ -1.26
CTNND1-230ENST00000532245 CNOT1A5YKK6 2376 aaKnown RBP7.19□□□□□ -1.26
CTNND1-230ENST00000532245 LOC101059948A0A1B0GTJ6 334 aa7.19□□□□□ -1.26
CTNND1-230ENST00000532245 DNAJB6O75190 326 aa7.19□□□□□ -1.26
CTNND1-230ENST00000532245 UBCP0CG48 685 aaKnown RBP7.19□□□□□ -1.26
CTNND1-230ENST00000532245 CALCBP10092 127 aa7.19□□□□□ -1.26
CTNND1-230ENST00000532245 TMBIM6P55061 237 aa7.19□□□□□ -1.26
CTNND1-230ENST00000532245 MLF1P58340 268 aa7.19□□□□□ -1.26
CTNND1-230ENST00000532245 SNRPD2P62316 118 aaKnown RBP7.19□□□□□ -1.26
CTNND1-230ENST00000532245 HES1Q14469 280 aa7.19□□□□□ -1.26
CTNND1-230ENST00000532245 SULF2Q8IWU5 870 aa7.19□□□□□ -1.26
CTNND1-230ENST00000532245 CMTM1Q8IZ96 169 aa7.19□□□□□ -1.26
CTNND1-230ENST00000532245 FAM83FQ8NEG4 500 aaPredicted RBP7.19□□□□□ -1.26
CTNND1-230ENST00000532245 MUL1Q969V5 352 aa7.19□□□□□ -1.26
CTNND1-230ENST00000532245 DMRTB1Q96MA1 342 aa7.19□□□□□ -1.26
CTNND1-230ENST00000532245 CMSS1Q9BQ75 279 aaKnown RBP7.19□□□□□ -1.26
CTNND1-230ENST00000532245 MGAT4AQ9UM21 535 aa7.19□□□□□ -1.26
CTNND1-230ENST00000532245 MRPS28Q9Y2Q9 187 aaKnown RBP7.19□□□□□ -1.26
CTNND1-230ENST00000532245 OR2M5A3KFT3 312 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 TEX46H3BTG2 121 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 BET1O15155 118 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 SLC34A2O95436 690 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 ANKRD34CP0C6C1 535 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 PIPP12273 146 aaPredicted RBP7.18□□□□□ -1.26
CTNND1-230ENST00000532245 MAP2K6P52564 334 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 CLDN12P56749 244 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 SLC37A1P57057 533 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 ALKBH1Q13686 389 aaKnown RBP7.18□□□□□ -1.26
CTNND1-230ENST00000532245 TOMM34Q15785 309 aaPredicted RBP7.18□□□□□ -1.26
CTNND1-230ENST00000532245 SFRP4Q6FHJ7 346 aaPredicted RBP7.18□□□□□ -1.26
CTNND1-230ENST00000532245 RIMKLAQ8IXN7 391 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 FNDC9Q8TBE3 224 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 TEAD3Q99594 435 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 MMP27Q9H306 513 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 ESRP2Q9H6T0 727 aaKnown RBP7.18□□□□□ -1.26
CTNND1-230ENST00000532245 DNAJB12Q9NXW2 375 aaKnown RBP7.18□□□□□ -1.26
CTNND1-230ENST00000532245 RAXQ9Y2V3 346 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 TDRD6O60522 2096 aaKnown RBP7.18□□□□□ -1.26
CTNND1-230ENST00000532245 MN1Q10571 1320 aaPredicted RBP7.18□□□□□ -1.26
CTNND1-230ENST00000532245 FUOMA2VDF0 154 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 TGM4P49221 684 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 VEGFCP49767 419 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 RELAQ04206 551 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 PMPCAQ10713 525 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 GPR176Q14439 515 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 DCDC5Q6ZRR9 648 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 NOXO1Q8NFA2 376 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 THAP6Q8TBB0 222 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 NRG4Q8WWG1 115 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 CPNE5Q9HCH3 593 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 NCOR1O75376 2440 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 H7C417 338 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 EFSO43281 561 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 LRP3O75074 770 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 UGT2B10P36537 528 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 PTH2RP49190 550 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 WNT3P56703 355 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 MPEG1Q2M385 716 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 PCGF3Q3KNV8 242 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 EMC4Q5J8M3 183 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 LRRC56Q8IYG6 542 aaPredicted RBP7.18□□□□□ -1.26
CTNND1-230ENST00000532245 SMAP2Q8WU79 429 aaPredicted RBP7.18□□□□□ -1.26
CTNND1-230ENST00000532245 ATF6BQ99941 703 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 NOX4Q9NPH5 578 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 FBXL2Q9UKC9 423 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 PTPRFP10586 1907 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 FXYD6-FXYD2A0A087WZ82 144 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 IGHV1-45A0A0A0MS14 117 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 A0A1W2PPH5 198 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 A0A1W2PQL4 384 aaPredicted RBP7.18□□□□□ -1.26
CTNND1-230ENST00000532245 HS3ST1O14792 307 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 CTSBP07858 339 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.18□□□□□ -1.26
CTNND1-230ENST00000532245 PYHIN1Q6K0P9 492 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 ACSM5Q6NUN0 579 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 LACC1Q8IV20 430 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 C9orf40Q8IXQ3 194 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 ENTHD1Q8IYW4 607 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 UBE2FQ969M7 185 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 RAB33BQ9H082 229 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 FXYD6Q9H0Q3 95 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 UBTD1Q9HAC8 227 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 GLTPQ9NZD2 209 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 RIF1Q5UIP0 2472 aaKnown RBP7.18□□□□□ -1.26
CTNND1-230ENST00000532245 IGKV1-8A0A0C4DH67 115 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 TUBAL3A6NHL2 446 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms