RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 FAM171A2A8MVW0 826 aa19.42■□□□□ 0.7
LRRK1-208ENST00000532029 HLA-DQA2P01906 255 aa19.42■□□□□ 0.7
LRRK1-208ENST00000532029 CD3EP07766 207 aa19.42■□□□□ 0.7
LRRK1-208ENST00000532029 CST2P09228 141 aa19.42■□□□□ 0.7
LRRK1-208ENST00000532029 PATE4P0C8F1 98 aa19.42■□□□□ 0.7
LRRK1-208ENST00000532029 PTAFRP25105 342 aa19.42■□□□□ 0.7
LRRK1-208ENST00000532029 EPHA2P29317 976 aa19.42■□□□□ 0.7
LRRK1-208ENST00000532029 PYCR1P32322 319 aa19.42■□□□□ 0.7
LRRK1-208ENST00000532029 PTDSS1P48651 473 aaKnown RBP19.42■□□□□ 0.7
LRRK1-208ENST00000532029 BSPH1Q075Z2 132 aa19.42■□□□□ 0.7
LRRK1-208ENST00000532029 ZIK1Q3SY52 487 aaPredicted RBP19.42■□□□□ 0.7
LRRK1-208ENST00000532029 NMNAT2Q9BZQ4 307 aa19.42■□□□□ 0.7
LRRK1-208ENST00000532029 EMC7Q9NPA0 242 aa19.42■□□□□ 0.7
LRRK1-208ENST00000532029 C8orf4Q9NR00 106 aa19.42■□□□□ 0.7
LRRK1-208ENST00000532029 CRNNQ9UBG3 495 aaPredicted RBP19.42■□□□□ 0.7
LRRK1-208ENST00000532029 FBXL3Q9UKT7 428 aa19.42■□□□□ 0.7
LRRK1-208ENST00000532029 FAM221AA4D161 298 aa19.41■□□□□ 0.7
LRRK1-208ENST00000532029 FAM183AA6NL82 134 aa19.41■□□□□ 0.7
LRRK1-208ENST00000532029 C12orf71A8MTZ7 269 aa19.41■□□□□ 0.7
LRRK1-208ENST00000532029 CD40P25942 277 aa19.41■□□□□ 0.7
LRRK1-208ENST00000532029 POLR2IP36954 125 aaKnown RBP19.41■□□□□ 0.7
LRRK1-208ENST00000532029 IDH3GP51553 393 aaPredicted RBP19.41■□□□□ 0.7
LRRK1-208ENST00000532029 PCBD1P61457 104 aa19.41■□□□□ 0.7
LRRK1-208ENST00000532029 LRRC36Q1X8D7 754 aa19.41■□□□□ 0.7
LRRK1-208ENST00000532029 C3orf36Q3SXR2 165 aa19.41■□□□□ 0.7
LRRK1-208ENST00000532029 LPCAT4Q643R3 524 aa19.41■□□□□ 0.7
LRRK1-208ENST00000532029 OR10H5Q8NGA6 315 aa19.41■□□□□ 0.7
LRRK1-208ENST00000532029 FGFBP3Q8TAT2 258 aa19.41■□□□□ 0.7
LRRK1-208ENST00000532029 C11orf40Q8WZ69 217 aa19.41■□□□□ 0.7
LRRK1-208ENST00000532029 WACQ9BTA9 647 aa19.41■□□□□ 0.7
LRRK1-208ENST00000532029 ZNF416Q9BWM5 594 aa19.41■□□□□ 0.7
LRRK1-208ENST00000532029 CLEC4MQ9H2X3 399 aaPredicted RBP19.41■□□□□ 0.7
LRRK1-208ENST00000532029 NOX3Q9HBY0 568 aa19.41■□□□□ 0.7
LRRK1-208ENST00000532029 POLR1DQ9Y2S0 133 aa19.41■□□□□ 0.7
LRRK1-208ENST00000532029 PKDREJQ9NTG1 2253 aa19.4■□□□□ 0.7
LRRK1-208ENST00000532029 IGHV1-18A0A0C4DH31 117 aa19.4■□□□□ 0.7
LRRK1-208ENST00000532029 MPZL1O95297 269 aa19.4■□□□□ 0.7
LRRK1-208ENST00000532029 GPANK1O95872 356 aa19.4■□□□□ 0.7
LRRK1-208ENST00000532029 IGKV3-15P01624 115 aa19.4■□□□□ 0.7
LRRK1-208ENST00000532029 SCG5P05408 212 aa19.4■□□□□ 0.7
LRRK1-208ENST00000532029 GYPBP06028 91 aa19.4■□□□□ 0.7
LRRK1-208ENST00000532029 GAAP10253 952 aa19.4■□□□□ 0.7
LRRK1-208ENST00000532029 SPI1P17947 270 aa19.4■□□□□ 0.7
LRRK1-208ENST00000532029 PEX2P28328 305 aa19.4■□□□□ 0.7
LRRK1-208ENST00000532029 LSM6P62312 80 aaKnown RBP19.4■□□□□ 0.7
LRRK1-208ENST00000532029 HSF2Q03933 536 aa19.4■□□□□ 0.7
LRRK1-208ENST00000532029 SLC34A1Q06495 639 aa19.4■□□□□ 0.7
LRRK1-208ENST00000532029 DBPQ10586 325 aaPredicted RBP19.4■□□□□ 0.7
LRRK1-208ENST00000532029 KCNMB1Q16558 191 aa19.4■□□□□ 0.7
LRRK1-208ENST00000532029 C12orf73Q69YU5 71 aa19.4■□□□□ 0.7
LRRK1-208ENST00000532029 PLBD1Q6P4A8 553 aa19.4■□□□□ 0.7
LRRK1-208ENST00000532029 UGT2A3Q6UWM9 527 aa19.4■□□□□ 0.7
LRRK1-208ENST00000532029 ZSCAN2Q7Z7L9 614 aaPredicted RBP19.4■□□□□ 0.7
LRRK1-208ENST00000532029 GALNT4Q8N4A0 578 aa19.4■□□□□ 0.7
LRRK1-208ENST00000532029 OR51L1Q8NGJ5 315 aa19.4■□□□□ 0.7
LRRK1-208ENST00000532029 HS3ST6Q96QI5 342 aa19.4■□□□□ 0.7
LRRK1-208ENST00000532029 KCNS3Q9BQ31 491 aa19.4■□□□□ 0.7
LRRK1-208ENST00000532029 MED20Q9H944 212 aa19.4■□□□□ 0.7
LRRK1-208ENST00000532029 RNPEPL1Q9HAU8 725 aa19.4■□□□□ 0.7
LRRK1-208ENST00000532029 RNF115Q9Y4L5 304 aa19.4■□□□□ 0.7
LRRK1-208ENST00000532029 ADGRG4Q8IZF6 3080 aa19.4■□□□□ 0.7
LRRK1-208ENST00000532029 ABCD4O14678 606 aa19.39■□□□□ 0.69
LRRK1-208ENST00000532029 IGLV1-44P01699 117 aa19.39■□□□□ 0.69
LRRK1-208ENST00000532029 MMP7P09237 267 aaPredicted RBP19.39■□□□□ 0.69
LRRK1-208ENST00000532029 PRF1P14222 555 aa19.39■□□□□ 0.69
LRRK1-208ENST00000532029 ZNF32P17041 273 aa19.39■□□□□ 0.69
LRRK1-208ENST00000532029 LOXP28300 417 aaPredicted RBP19.39■□□□□ 0.69
LRRK1-208ENST00000532029 FMO3P31513 532 aa19.39■□□□□ 0.69
LRRK1-208ENST00000532029 BLVRAP53004 296 aa19.39■□□□□ 0.69
LRRK1-208ENST00000532029 PLP2Q04941 152 aa19.39■□□□□ 0.69
LRRK1-208ENST00000532029 ENDOGQ14249 297 aaKnown RBP19.39■□□□□ 0.69
LRRK1-208ENST00000532029 CXXC5Q7LFL8 322 aaKnown RBP19.39■□□□□ 0.69
LRRK1-208ENST00000532029 SYT9Q86SS6 491 aa19.39■□□□□ 0.69
LRRK1-208ENST00000532029 CPOQ8IVL8 374 aa19.39■□□□□ 0.69
LRRK1-208ENST00000532029 DEPDC4Q8N2C3 294 aa19.39■□□□□ 0.69
LRRK1-208ENST00000532029 PIAS4Q8N2W9 510 aaPredicted RBP19.39■□□□□ 0.69
LRRK1-208ENST00000532029 PACRGLQ8N7B6 248 aa19.39■□□□□ 0.69
LRRK1-208ENST00000532029 SLC26A10Q8NG04 563 aa19.39■□□□□ 0.69
LRRK1-208ENST00000532029 FBXO17Q96EF6 278 aa19.39■□□□□ 0.69
LRRK1-208ENST00000532029 OR51V1Q9H2C8 321 aa19.39■□□□□ 0.69
LRRK1-208ENST00000532029 TOR3AQ9H497 397 aa19.39■□□□□ 0.69
LRRK1-208ENST00000532029 HINT3Q9NQE9 182 aaKnown RBP19.39■□□□□ 0.69
LRRK1-208ENST00000532029 NKX1-2Q9UD57 310 aaPredicted RBP19.39■□□□□ 0.69
LRRK1-208ENST00000532029 TIMM10BQ9Y5J6 103 aa19.39■□□□□ 0.69
LRRK1-208ENST00000532029 NBPF19A0A087WUL8 3843 aa19.38■□□□□ 0.69
LRRK1-208ENST00000532029 CASQ2O14958 399 aaPredicted RBP19.38■□□□□ 0.69
LRRK1-208ENST00000532029 PRKYO43930 277 aa19.38■□□□□ 0.69
LRRK1-208ENST00000532029 CELA3BP08861 270 aa19.38■□□□□ 0.69
LRRK1-208ENST00000532029 CECR9P0C854 216 aa19.38■□□□□ 0.69
LRRK1-208ENST00000532029 CLUP10909 449 aa19.38■□□□□ 0.69
LRRK1-208ENST00000532029 ZNF823P16415 610 aa19.38■□□□□ 0.69
LRRK1-208ENST00000532029 CDC42P60953 191 aa19.38■□□□□ 0.69
LRRK1-208ENST00000532029 TEKQ02763 1124 aa19.38■□□□□ 0.69
LRRK1-208ENST00000532029 RAB39AQ14964 217 aa19.38■□□□□ 0.69
LRRK1-208ENST00000532029 OTPQ5XKR4 325 aa19.38■□□□□ 0.69
LRRK1-208ENST00000532029 TCEANCQ8N8B7 351 aa19.38■□□□□ 0.69
LRRK1-208ENST00000532029 OR6K6Q8NGW6 343 aa19.38■□□□□ 0.69
LRRK1-208ENST00000532029 PTP4A1Q93096 173 aa19.38■□□□□ 0.69
LRRK1-208ENST00000532029 RADILQ96JH8 1075 aa19.38■□□□□ 0.69
LRRK1-208ENST00000532029 RDH12Q96NR8 316 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms