RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 F8A1P23610 371 aa4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 SEC61BP60468 96 aaKnown RBP4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 DLG1Q12959 904 aa4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 KRR1Q13601 381 aaKnown RBP4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 RAB31Q13636 194 aa4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 LIN52Q52LA3 116 aa4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 DPPA2Q7Z7J5 298 aa4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 EID3Q8N140 333 aa4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 UBL4BQ8N7F7 174 aa4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 OR1S2Q8NGQ3 325 aa4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 OR51F2Q8NH61 342 aa4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 OR2AE1Q8NHA4 323 aa4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 ANKRD9Q96BM1 317 aaPredicted RBP4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 PPP1R2P1Q96PQ5 205 aa4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 OR14A2Q96R54 314 aa4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 TMEM109Q9BVC6 243 aa4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 PCBD2Q9H0N5 130 aa4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 GLIPR2Q9H4G4 154 aa4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 DHX35Q9H5Z1 703 aaKnown RBP4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 EML4Q9HC35 981 aaKnown RBP4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 TEX10Q9NXF1 929 aaPredicted RBP4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 SMPXQ9UHP9 88 aa4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 ARL2BPQ9Y2Y0 163 aa4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 DDX60Q8IY21 1712 aaKnown RBP4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 PARP4Q9UKK3 1724 aaKnown RBP4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 OVOS2A0A0G2JMS6 1433 aa4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 OVOS2A0A0J9YW53 1432 aa4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 OVOS2Q6IE36 1432 aa4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 TRBV5-5A0A0J9YX44 114 aa4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 FAM231BA6NCW3 169 aa4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 INPP4BO15327 924 aa4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 ENSAO43768 121 aaKnown RBP4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 HLA-AP01891 365 aaKnown RBP4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 UCHL3P15374 230 aa4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 HIST1H1CP16403 213 aaKnown RBP4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 MPIP34949 423 aa4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 GMPRP36959 345 aa4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 VHLP40337 213 aa4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 RPS18P62269 152 aaKnown RBP4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 GNGT1P63211 74 aa4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 DGCR2P98153 550 aa4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 ASAH1Q13510 395 aa4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 SLC9C1Q4G0N8 1177 aa4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 SAXO2Q658L1 398 aa4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 RAD9BQ6WBX8 426 aa4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 SLC16A12Q6ZSM3 486 aa4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 LHFPL3Q86UP9 236 aa4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 SLC47A2Q86VL8 602 aa4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 PDIK1LQ8N165 341 aa4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 KIR3DL3Q8N743 410 aa4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 NANOGP1Q8N7R0 232 aa4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 TMEM35BQ8NCS4 154 aa4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 ITFG1Q8TB96 612 aa4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 SFXN5Q8TD22 340 aa4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 WFIKKN2Q8TEU8 576 aa4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 OR5P2Q8WZ92 322 aa4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 RNF2Q99496 336 aa4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 DUSP26Q9BV47 211 aa4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 APOBEC3GQ9HC16 384 aaKnown RBP4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 AKIP1Q9NQ31 210 aa4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 SLC25A37Q9NYZ2 338 aa4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 NDRG2Q9UN36 371 aaKnown RBP4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 SNX24Q9Y343 169 aa4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 DHRS7Q9Y394 339 aa4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 PRELID3BQ9Y3B1 194 aa4.54□□□□□ -1.68
ECHDC1-222ENST00000531967 C3P01024 1663 aa4.53□□□□□ -1.68
ECHDC1-222ENST00000531967 RIMS2Q9UQ26 1411 aa4.53□□□□□ -1.68
ECHDC1-222ENST00000531967 CLUHO75153 1309 aa4.53□□□□□ -1.68
ECHDC1-222ENST00000531967 TRAV8-7A0A075B6U6 113 aa4.53□□□□□ -1.68
ECHDC1-222ENST00000531967 A0A1B0GV72 72 aa4.53□□□□□ -1.68
ECHDC1-222ENST00000531967 A0A1W2PR80 420 aa4.53□□□□□ -1.68
ECHDC1-222ENST00000531967 RNF212BA8MTL3 300 aa4.53□□□□□ -1.68
ECHDC1-222ENST00000531967 F5H5T6 163 aa4.53□□□□□ -1.68
ECHDC1-222ENST00000531967 PRRG2O14669 202 aa4.53□□□□□ -1.68
ECHDC1-222ENST00000531967 FADS1O60427 444 aa4.53□□□□□ -1.68
ECHDC1-222ENST00000531967 GATBO75879 557 aaKnown RBP4.53□□□□□ -1.68
ECHDC1-222ENST00000531967 ATP1B1P05026 303 aa4.53□□□□□ -1.68
ECHDC1-222ENST00000531967 CRABP1P29762 137 aa4.53□□□□□ -1.68
ECHDC1-222ENST00000531967 FOXN2P32314 431 aa4.53□□□□□ -1.68
ECHDC1-222ENST00000531967 XCR1P46094 333 aa4.53□□□□□ -1.68
ECHDC1-222ENST00000531967 AVPR1BP47901 424 aa4.53□□□□□ -1.68
ECHDC1-222ENST00000531967 TAS2R60P59551 318 aa4.53□□□□□ -1.68
ECHDC1-222ENST00000531967 FLI1Q01543 452 aaPredicted RBP4.53□□□□□ -1.68
ECHDC1-222ENST00000531967 PRKCDQ05655 676 aa4.53□□□□□ -1.68
ECHDC1-222ENST00000531967 RAB40BQ12829 278 aa4.53□□□□□ -1.68
ECHDC1-222ENST00000531967 ELAVL2Q12926 359 aaKnown RBP4.53□□□□□ -1.68
ECHDC1-222ENST00000531967 IL18R1Q13478 541 aa4.53□□□□□ -1.68
ECHDC1-222ENST00000531967 ITPK1Q13572 414 aa4.53□□□□□ -1.68
ECHDC1-222ENST00000531967 SF3A2Q15428 464 aaKnown RBP4.53□□□□□ -1.68
ECHDC1-222ENST00000531967 DUSP7Q16829 419 aa4.53□□□□□ -1.68
ECHDC1-222ENST00000531967 BEAN1Q3B7T3 259 aa4.53□□□□□ -1.68
ECHDC1-222ENST00000531967 ZNF544Q6NX49 715 aa4.53□□□□□ -1.68
ECHDC1-222ENST00000531967 CMC1Q7Z7K0 106 aa4.53□□□□□ -1.68
ECHDC1-222ENST00000531967 DNAJC22Q8N4W6 341 aa4.53□□□□□ -1.68
ECHDC1-222ENST00000531967 SEMA6DQ8NFY4 1073 aa4.53□□□□□ -1.68
ECHDC1-222ENST00000531967 OR4D10Q8NGI6 311 aa4.53□□□□□ -1.68
ECHDC1-222ENST00000531967 C8orf46Q8TAG6 207 aa4.53□□□□□ -1.68
ECHDC1-222ENST00000531967 TADA1Q96BN2 335 aa4.53□□□□□ -1.68
ECHDC1-222ENST00000531967 CAPNS2Q96L46 248 aa4.53□□□□□ -1.68
ECHDC1-222ENST00000531967 ZNF285Q96NJ3 590 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms