RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 TMEM38BQ9NVV0 291 aa7.53□□□□□ -1.2
USF1-210ENST00000531842 SLCO1C1Q9NYB5 712 aa7.53□□□□□ -1.2
USF1-210ENST00000531842 MRPL39Q9NYK5 338 aaKnown RBP7.53□□□□□ -1.2
USF1-210ENST00000531842 GLTPQ9NZD2 209 aa7.53□□□□□ -1.2
USF1-210ENST00000531842 TESQ9UGI8 421 aaKnown RBP7.53□□□□□ -1.2
USF1-210ENST00000531842 FBXL3Q9UKT7 428 aa7.53□□□□□ -1.2
USF1-210ENST00000531842 CORO2BQ9UQ03 480 aa7.53□□□□□ -1.2
USF1-210ENST00000531842 ZNF281Q9Y2X9 895 aa7.53□□□□□ -1.2
USF1-210ENST00000531842 NPTNQ9Y639 398 aa7.53□□□□□ -1.2
USF1-210ENST00000531842 LOC100509620A0A075B734 347 aa7.52□□□□□ -1.21
USF1-210ENST00000531842 IGKV1D-43A0A0B4J1Z2 117 aa7.52□□□□□ -1.21
USF1-210ENST00000531842 A0A0B4J2E0 115 aa7.52□□□□□ -1.21
USF1-210ENST00000531842 A0A0G2JND7 137 aa7.52□□□□□ -1.21
USF1-210ENST00000531842 A0A1B0GX12 115 aa7.52□□□□□ -1.21
USF1-210ENST00000531842 H0YL77 283 aa7.52□□□□□ -1.21
USF1-210ENST00000531842 CLDN34H7C241 214 aa7.52□□□□□ -1.21
USF1-210ENST00000531842 FXYD1O00168 92 aa7.52□□□□□ -1.21
USF1-210ENST00000531842 ENTPD5O75356 428 aa7.52□□□□□ -1.21
USF1-210ENST00000531842 FARS2O95363 451 aaKnown RBP7.52□□□□□ -1.21
USF1-210ENST00000531842 HIST1H2ABP04908 130 aa7.52□□□□□ -1.21
USF1-210ENST00000531842 MMP7P09237 267 aaPredicted RBP7.52□□□□□ -1.21
USF1-210ENST00000531842 QDPRP09417 244 aa7.52□□□□□ -1.21
USF1-210ENST00000531842 ADORA3P0DMS8 318 aa7.52□□□□□ -1.21
USF1-210ENST00000531842 ERFP50548 548 aa7.52□□□□□ -1.21
USF1-210ENST00000531842 CRYBA2P53672 197 aa7.52□□□□□ -1.21
USF1-210ENST00000531842 SELENOVP59797 346 aa7.52□□□□□ -1.21
USF1-210ENST00000531842 PAX2Q02962 417 aa7.52□□□□□ -1.21
USF1-210ENST00000531842 PABPC1L2AQ5JQF8 200 aa7.52□□□□□ -1.21
USF1-210ENST00000531842 OLFML2AQ68BL7 652 aa7.52□□□□□ -1.21
USF1-210ENST00000531842 Q6ZPA2 131 aa7.52□□□□□ -1.21
USF1-210ENST00000531842 SLC35D2Q76EJ3 337 aa7.52□□□□□ -1.21
USF1-210ENST00000531842 HIST3H2AQ7L7L0 130 aa7.52□□□□□ -1.21
USF1-210ENST00000531842 PIWIL3Q7Z3Z3 882 aaKnown RBP7.52□□□□□ -1.21
USF1-210ENST00000531842 TREML1Q86YW5 311 aa7.52□□□□□ -1.21
USF1-210ENST00000531842 DPP10Q8N608 796 aa7.52□□□□□ -1.21
USF1-210ENST00000531842 SMYD1Q8NB12 490 aa7.52□□□□□ -1.21
USF1-210ENST00000531842 SYT14Q8NB59 555 aa7.52□□□□□ -1.21
USF1-210ENST00000531842 RBM15BQ8NDT2 890 aaKnown RBP7.52□□□□□ -1.21
USF1-210ENST00000531842 OR5J2Q8NH18 312 aa7.52□□□□□ -1.21
USF1-210ENST00000531842 OR6S1Q8NH40 331 aa7.52□□□□□ -1.21
USF1-210ENST00000531842 HIST1H2ACQ93077 130 aa7.52□□□□□ -1.21
USF1-210ENST00000531842 UBE2FQ969M7 185 aa7.52□□□□□ -1.21
USF1-210ENST00000531842 MARS2Q96GW9 593 aaKnown RBP7.52□□□□□ -1.21
USF1-210ENST00000531842 MCHR1Q99705 422 aa7.52□□□□□ -1.21
USF1-210ENST00000531842 ARHGDIGQ99819 225 aa7.52□□□□□ -1.21
USF1-210ENST00000531842 CPPED1Q9BRF8 314 aaPredicted RBP7.52□□□□□ -1.21
USF1-210ENST00000531842 TMEM120AQ9BXJ8 343 aa7.52□□□□□ -1.21
USF1-210ENST00000531842 DENND2DQ9H6A0 471 aaPredicted RBP7.52□□□□□ -1.21
USF1-210ENST00000531842 CCDC134Q9H6E4 229 aa7.52□□□□□ -1.21
USF1-210ENST00000531842 GPR160Q9UJ42 338 aa7.52□□□□□ -1.21
USF1-210ENST00000531842 ANGPT4Q9Y264 503 aa7.52□□□□□ -1.21
USF1-210ENST00000531842 MMP24Q9Y5R2 645 aa7.52□□□□□ -1.21
USF1-210ENST00000531842 SLC22A23A1A5C7 686 aa7.51□□□□□ -1.21
USF1-210ENST00000531842 CPSF4LA6NMK7 179 aaKnown RBP7.51□□□□□ -1.21
USF1-210ENST00000531842 F5H0A9 414 aaPredicted RBP7.51□□□□□ -1.21
USF1-210ENST00000531842 M0R3H8 397 aa7.51□□□□□ -1.21
USF1-210ENST00000531842 KPNA4O00629 521 aaPredicted RBP7.51□□□□□ -1.21
USF1-210ENST00000531842 DHHO43323 396 aa7.51□□□□□ -1.21
USF1-210ENST00000531842 RNF13O43567 381 aa7.51□□□□□ -1.21
USF1-210ENST00000531842 MGRN1O60291 552 aa7.51□□□□□ -1.21
USF1-210ENST00000531842 MFN2O95140 757 aa7.51□□□□□ -1.21
USF1-210ENST00000531842 SLC2A10O95528 541 aa7.51□□□□□ -1.21
USF1-210ENST00000531842 CH25HO95992 272 aa7.51□□□□□ -1.21
USF1-210ENST00000531842 PLATP00750 562 aa7.51□□□□□ -1.21
USF1-210ENST00000531842 MT-ATP6P00846 226 aa7.51□□□□□ -1.21
USF1-210ENST00000531842 UMPSP11172 480 aa7.51□□□□□ -1.21
USF1-210ENST00000531842 SELEP16581 610 aa7.51□□□□□ -1.21
USF1-210ENST00000531842 PAX8Q06710 450 aa7.51□□□□□ -1.21
USF1-210ENST00000531842 OCLNQ16625 522 aa7.51□□□□□ -1.21
USF1-210ENST00000531842 CYP51A1Q16850 503 aa7.51□□□□□ -1.21
USF1-210ENST00000531842 TBC1D28Q2M2D7 210 aa7.51□□□□□ -1.21
USF1-210ENST00000531842 FAM201AQ5SY85 155 aa7.51□□□□□ -1.21
USF1-210ENST00000531842 SWT1Q5T5J6 900 aaKnown RBP7.51□□□□□ -1.21
USF1-210ENST00000531842 TMEM53Q6P2H8 277 aa7.51□□□□□ -1.21
USF1-210ENST00000531842 TTC33Q6PID6 262 aaPredicted RBP7.51□□□□□ -1.21
USF1-210ENST00000531842 Q6ZR03 302 aa7.51□□□□□ -1.21
USF1-210ENST00000531842 SLC16A14Q7RTX9 510 aa7.51□□□□□ -1.21
USF1-210ENST00000531842 TSPYL5Q86VY4 417 aaPredicted RBP7.51□□□□□ -1.21
USF1-210ENST00000531842 POU5F2Q8N7G0 328 aa7.51□□□□□ -1.21
USF1-210ENST00000531842 HIPK4Q8NE63 616 aa7.51□□□□□ -1.21
USF1-210ENST00000531842 OR10S1Q8NGN2 331 aa7.51□□□□□ -1.21
USF1-210ENST00000531842 ABHD4Q8TB40 342 aa7.51□□□□□ -1.21
USF1-210ENST00000531842 KLF14Q8TD94 323 aaPredicted RBP7.51□□□□□ -1.21
USF1-210ENST00000531842 ZNF566Q969W8 418 aa7.51□□□□□ -1.21
USF1-210ENST00000531842 SIGLEC11Q96RL6 698 aa7.51□□□□□ -1.21
USF1-210ENST00000531842 TMEM43Q9BTV4 400 aa7.51□□□□□ -1.21
USF1-210ENST00000531842 MRI1Q9BV20 369 aa7.51□□□□□ -1.21
USF1-210ENST00000531842 TMEM38AQ9H6F2 299 aa7.51□□□□□ -1.21
USF1-210ENST00000531842 EVA1AQ9H8M9 152 aa7.51□□□□□ -1.21
USF1-210ENST00000531842 ZMAT3Q9HA38 289 aaKnown RBP7.51□□□□□ -1.21
USF1-210ENST00000531842 BEX1Q9HBH7 125 aa7.51□□□□□ -1.21
USF1-210ENST00000531842 TMEM106BQ9NUM4 274 aa7.51□□□□□ -1.21
USF1-210ENST00000531842 TAS2R5Q9NYW4 299 aa7.51□□□□□ -1.21
USF1-210ENST00000531842 PPIAL4EA0A075B759 164 aa7.5□□□□□ -1.21
USF1-210ENST00000531842 PPIAL4CA0A0B4J2A2 164 aa7.5□□□□□ -1.21
USF1-210ENST00000531842 C5orf49A4QMS7 147 aa7.5□□□□□ -1.21
USF1-210ENST00000531842 CEACAM18A8MTB9 384 aa7.5□□□□□ -1.21
USF1-210ENST00000531842 PPIAL4DF5H284 164 aa7.5□□□□□ -1.21
USF1-210ENST00000531842 M0QX08 132 aa7.5□□□□□ -1.21
USF1-210ENST00000531842 M0QZ24 198 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms