RNA–Protein interactions for RNA: ENST00000531297.1

SOX6-214, Transcript of SRY-box 6, humanhuman

TSL 3

Gene SOX6, Length 429 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-214ENST00000531297 RBM48Q5RL73 367 aaKnown RBP3.63□□□□□ -1.83
SOX6-214ENST00000531297 PRAMEF20Q5VT98 475 aa3.63□□□□□ -1.83
SOX6-214ENST00000531297 RAET1LQ5VY80 246 aa3.63□□□□□ -1.83
SOX6-214ENST00000531297 KRT80Q6KB66 452 aa3.63□□□□□ -1.83
SOX6-214ENST00000531297 KRTAP5-1Q6L8H4 278 aa3.63□□□□□ -1.83
SOX6-214ENST00000531297 RPUSD3Q6P087 351 aaKnown RBP3.63□□□□□ -1.83
SOX6-214ENST00000531297 C3orf33Q6P1S2 294 aa3.63□□□□□ -1.83
SOX6-214ENST00000531297 ZNF773Q6PK81 442 aa3.63□□□□□ -1.83
SOX6-214ENST00000531297 IGFL2Q6UWQ7 119 aa3.63□□□□□ -1.83
SOX6-214ENST00000531297 C16orf47Q6ZP98 133 aaPredicted RBP3.63□□□□□ -1.83
SOX6-214ENST00000531297 ASB18Q6ZVZ8 466 aa3.63□□□□□ -1.83
SOX6-214ENST00000531297 OLIG3Q7RTU3 272 aa3.63□□□□□ -1.83
SOX6-214ENST00000531297 HDDC2Q7Z4H3 204 aa3.63□□□□□ -1.83
SOX6-214ENST00000531297 KLBQ86Z14 1044 aa3.63□□□□□ -1.83
SOX6-214ENST00000531297 RBM45Q8IUH3 476 aaKnown RBP3.63□□□□□ -1.83
SOX6-214ENST00000531297 ENTHD1Q8IYW4 607 aa3.63□□□□□ -1.83
SOX6-214ENST00000531297 C8orf59Q8N0T1 100 aaPredicted RBP3.63□□□□□ -1.83
SOX6-214ENST00000531297 SLC43A2Q8N370 569 aa3.63□□□□□ -1.83
SOX6-214ENST00000531297 ZNF786Q8N393 782 aa3.63□□□□□ -1.83
SOX6-214ENST00000531297 PARP8Q8N3A8 854 aa3.63□□□□□ -1.83
SOX6-214ENST00000531297 CLIP4Q8N3C7 705 aa3.63□□□□□ -1.83
SOX6-214ENST00000531297 C10orf53Q8N6V4 93 aa3.63□□□□□ -1.83
SOX6-214ENST00000531297 TEX19Q8NA77 164 aa3.63□□□□□ -1.83
SOX6-214ENST00000531297 GATSQ8NAP1 163 aa3.63□□□□□ -1.83
SOX6-214ENST00000531297 FAM71CQ8NEG0 241 aa3.63□□□□□ -1.83
SOX6-214ENST00000531297 ZNF555Q8NEP9 628 aa3.63□□□□□ -1.83
SOX6-214ENST00000531297 FDCSPQ8NFU4 85 aa3.63□□□□□ -1.83
SOX6-214ENST00000531297 OR2M7Q8NG81 312 aa3.63□□□□□ -1.83
SOX6-214ENST00000531297 OR6T1Q8NGN1 323 aa3.63□□□□□ -1.83
SOX6-214ENST00000531297 OR13F1Q8NGS4 319 aa3.63□□□□□ -1.83
SOX6-214ENST00000531297 OR6S1Q8NH40 331 aa3.63□□□□□ -1.83
SOX6-214ENST00000531297 OR14L1PQ8NHC6 308 aa3.63□□□□□ -1.83
SOX6-214ENST00000531297 GNPDA2Q8TDQ7 276 aa3.63□□□□□ -1.83
SOX6-214ENST00000531297 GPR119Q8TDV5 335 aa3.63□□□□□ -1.83
SOX6-214ENST00000531297 ZFAND2BQ8WV99 257 aa3.63□□□□□ -1.83
SOX6-214ENST00000531297 ACOT11Q8WXI4 607 aaPredicted RBP3.63□□□□□ -1.83
SOX6-214ENST00000531297 MUL1Q969V5 352 aa3.63□□□□□ -1.83
SOX6-214ENST00000531297 DGCR14Q96DF8 476 aaKnown RBP3.63□□□□□ -1.83
SOX6-214ENST00000531297 NODALQ96S42 347 aa3.63□□□□□ -1.83
SOX6-214ENST00000531297 NIPSNAP1Q9BPW8 284 aa3.63□□□□□ -1.83
SOX6-214ENST00000531297 NAA11Q9BSU3 229 aaPredicted RBP3.63□□□□□ -1.83
SOX6-214ENST00000531297 TMEM43Q9BTV4 400 aa3.63□□□□□ -1.83
SOX6-214ENST00000531297 POTEKPQ9BYX7 375 aa3.63□□□□□ -1.83
SOX6-214ENST00000531297 YIPF3Q9GZM5 350 aa3.63□□□□□ -1.83
SOX6-214ENST00000531297 NMNAT1Q9HAN9 279 aaPredicted RBP3.63□□□□□ -1.83
SOX6-214ENST00000531297 KLHL1Q9NR64 748 aa3.63□□□□□ -1.83
SOX6-214ENST00000531297 PTTG2Q9NZH5 202 aa3.63□□□□□ -1.83
SOX6-214ENST00000531297 MED11Q9P086 117 aa3.63□□□□□ -1.83
SOX6-214ENST00000531297 PDP1Q9P0J1 537 aaPredicted RBP3.63□□□□□ -1.83
SOX6-214ENST00000531297 A4GNTQ9UNA3 340 aa3.63□□□□□ -1.83
SOX6-214ENST00000531297 POFUT2Q9Y2G5 429 aa3.63□□□□□ -1.83
SOX6-214ENST00000531297 HDGFL3Q9Y3E1 203 aa3.63□□□□□ -1.83
SOX6-214ENST00000531297 CHCHD2Q9Y6H1 151 aaPredicted RBP3.63□□□□□ -1.83
SOX6-214ENST00000531297 COMMD3-BMI1R4GMX3 469 aa3.63□□□□□ -1.83
SOX6-214ENST00000531297 U3KQV3 271 aa3.63□□□□□ -1.83
SOX6-214ENST00000531297 EXPH5Q8NEV8 1989 aa3.63□□□□□ -1.83
SOX6-214ENST00000531297 NINQ8N4C6 2090 aa3.63□□□□□ -1.83
SOX6-214ENST00000531297 TRAV36DV7A0A075B6V5 113 aa3.62□□□□□ -1.83
SOX6-214ENST00000531297 A0A087WUJ7 227 aa3.62□□□□□ -1.83
SOX6-214ENST00000531297 TMED7-TICAM2A0A0A6YYA0 188 aa3.62□□□□□ -1.83
SOX6-214ENST00000531297 A0A0B4J2E0 115 aa3.62□□□□□ -1.83
SOX6-214ENST00000531297 TRBV4-1A0A0J9YWV2 114 aa3.62□□□□□ -1.83
SOX6-214ENST00000531297 A0A1B0GWA3 101 aa3.62□□□□□ -1.83
SOX6-214ENST00000531297 A0A1B0GX12 115 aa3.62□□□□□ -1.83
SOX6-214ENST00000531297 SNTNA6NMZ2 147 aa3.62□□□□□ -1.83
SOX6-214ENST00000531297 SEC14L5O43304 696 aa3.62□□□□□ -1.83
SOX6-214ENST00000531297 DNPH1O43598 174 aa3.62□□□□□ -1.83
SOX6-214ENST00000531297 HCN1O60741 890 aa3.62□□□□□ -1.83
SOX6-214ENST00000531297 BCAS1O75363 584 aaPredicted RBP3.62□□□□□ -1.83
SOX6-214ENST00000531297 TRIM3O75382 744 aaPredicted RBP3.62□□□□□ -1.83
SOX6-214ENST00000531297 VAMP5O95183 116 aa3.62□□□□□ -1.83
SOX6-214ENST00000531297 LYPD3O95274 346 aa3.62□□□□□ -1.83
SOX6-214ENST00000531297 SYNGR4O95473 234 aa3.62□□□□□ -1.83
SOX6-214ENST00000531297 ACTL6AO96019 429 aa3.62□□□□□ -1.83
SOX6-214ENST00000531297 ADAP00813 363 aa3.62□□□□□ -1.83
SOX6-214ENST00000531297 THY1P04216 161 aa3.62□□□□□ -1.83
SOX6-214ENST00000531297 HMGN1P05114 100 aa3.62□□□□□ -1.83
SOX6-214ENST00000531297 HOXD4P09016 255 aaPredicted RBP3.62□□□□□ -1.83
SOX6-214ENST00000531297 SAGP10523 405 aaPredicted RBP3.62□□□□□ -1.83
SOX6-214ENST00000531297 NR2C1P13056 603 aa3.62□□□□□ -1.83
SOX6-214ENST00000531297 ZNF24P17028 368 aa3.62□□□□□ -1.83
SOX6-214ENST00000531297 GGT2P36268 569 aa3.62□□□□□ -1.83
SOX6-214ENST00000531297 ACAA2P42765 397 aaKnown RBP3.62□□□□□ -1.83
SOX6-214ENST00000531297 DNASE1L1P49184 302 aa3.62□□□□□ -1.83
SOX6-214ENST00000531297 ZNF136P52737 540 aa3.62□□□□□ -1.83
SOX6-214ENST00000531297 NUDT6P53370 316 aa3.62□□□□□ -1.83
SOX6-214ENST00000531297 CASP6P55212 293 aa3.62□□□□□ -1.83
SOX6-214ENST00000531297 DLX5P56178 289 aa3.62□□□□□ -1.83
SOX6-214ENST00000531297 SELENOVP59797 346 aa3.62□□□□□ -1.83
SOX6-214ENST00000531297 PRPS1P60891 318 aa3.62□□□□□ -1.83
SOX6-214ENST00000531297 ESRRGP62508 458 aa3.62□□□□□ -1.83
SOX6-214ENST00000531297 EFNB1P98172 346 aa3.62□□□□□ -1.83
SOX6-214ENST00000531297 IL1RL1Q01638 556 aa3.62□□□□□ -1.83
SOX6-214ENST00000531297 NPRL3Q12980 569 aa3.62□□□□□ -1.83
SOX6-214ENST00000531297 SELENBP1Q13228 472 aa3.62□□□□□ -1.83
SOX6-214ENST00000531297 IRF3Q14653 427 aa3.62□□□□□ -1.83
SOX6-214ENST00000531297 QPRTQ15274 297 aa3.62□□□□□ -1.83
SOX6-214ENST00000531297 CD226Q15762 336 aa3.62□□□□□ -1.83
SOX6-214ENST00000531297 BCL2A1Q16548 175 aa3.62□□□□□ -1.83
SOX6-214ENST00000531297 HYAL4Q2M3T9 481 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms