RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 OTCP00480 354 aa5.71□□□□□ -1.5
CSDE1-213ENST00000530784 PDYNP01213 254 aa5.71□□□□□ -1.5
CSDE1-213ENST00000530784 CRHP06850 196 aa5.71□□□□□ -1.5
CSDE1-213ENST00000530784 RPS17P08708 135 aaKnown RBP5.71□□□□□ -1.5
CSDE1-213ENST00000530784 MPZP25189 248 aa5.71□□□□□ -1.5
CSDE1-213ENST00000530784 IL12BP29460 328 aa5.71□□□□□ -1.5
CSDE1-213ENST00000530784 PHBP35232 272 aa5.71□□□□□ -1.5
CSDE1-213ENST00000530784 EMDP50402 254 aa5.71□□□□□ -1.5
CSDE1-213ENST00000530784 PAX9P55771 341 aa5.71□□□□□ -1.5
CSDE1-213ENST00000530784 CLDN18P56856 261 aa5.71□□□□□ -1.5
CSDE1-213ENST00000530784 TRA2BP62995 288 aaKnown RBP5.71□□□□□ -1.5
CSDE1-213ENST00000530784 GUCY2DQ02846 1103 aa5.71□□□□□ -1.5
CSDE1-213ENST00000530784 OR5M10Q6IEU7 315 aa5.71□□□□□ -1.5
CSDE1-213ENST00000530784 FIP1L1Q6UN15 594 aaKnown RBP5.71□□□□□ -1.5
CSDE1-213ENST00000530784 Q6ZRP5 223 aa5.71□□□□□ -1.5
CSDE1-213ENST00000530784 CENPVQ7Z7K6 275 aaPredicted RBP5.71□□□□□ -1.5
CSDE1-213ENST00000530784 UBQLNLQ8IYU4 475 aa5.71□□□□□ -1.5
CSDE1-213ENST00000530784 CNEP1R1Q8N9A8 125 aa5.71□□□□□ -1.5
CSDE1-213ENST00000530784 OR4K17Q8NGC6 315 aa5.71□□□□□ -1.5
CSDE1-213ENST00000530784 OR10G8Q8NGN5 311 aa5.71□□□□□ -1.5
CSDE1-213ENST00000530784 OR13C3Q8NGS6 347 aa5.71□□□□□ -1.5
CSDE1-213ENST00000530784 VANGL1Q8TAA9 524 aaPredicted RBP5.71□□□□□ -1.5
CSDE1-213ENST00000530784 ZNF675Q8TD23 568 aa5.71□□□□□ -1.5
CSDE1-213ENST00000530784 SMAP2Q8WU79 429 aaPredicted RBP5.71□□□□□ -1.5
CSDE1-213ENST00000530784 SELENOMQ8WWX9 145 aa5.71□□□□□ -1.5
CSDE1-213ENST00000530784 TMBIM1Q969X1 311 aa5.71□□□□□ -1.5
CSDE1-213ENST00000530784 TM4SF18Q96CE8 201 aa5.71□□□□□ -1.5
CSDE1-213ENST00000530784 CNRIP1Q96F85 164 aaPredicted RBP5.71□□□□□ -1.5
CSDE1-213ENST00000530784 PIK3IP1Q96FE7 263 aa5.71□□□□□ -1.5
CSDE1-213ENST00000530784 FAM111AQ96PZ2 611 aa5.71□□□□□ -1.5
CSDE1-213ENST00000530784 BTBD9Q96Q07 612 aa5.71□□□□□ -1.5
CSDE1-213ENST00000530784 CCL19Q99731 98 aa5.71□□□□□ -1.5
CSDE1-213ENST00000530784 MED18Q9BUE0 208 aa5.71□□□□□ -1.5
CSDE1-213ENST00000530784 GRPEL1Q9HAV7 217 aa5.71□□□□□ -1.5
CSDE1-213ENST00000530784 FARSBQ9NSD9 589 aaKnown RBP5.71□□□□□ -1.5
CSDE1-213ENST00000530784 NMRK1Q9NWW6 199 aa5.71□□□□□ -1.5
CSDE1-213ENST00000530784 KLHL28Q9NXS3 571 aa5.71□□□□□ -1.5
CSDE1-213ENST00000530784 C6orf203Q9P0P8 240 aaPredicted RBP5.71□□□□□ -1.5
CSDE1-213ENST00000530784 SENP1Q9P0U3 644 aa5.71□□□□□ -1.5
CSDE1-213ENST00000530784 SNX6Q9UNH7 406 aa5.71□□□□□ -1.5
CSDE1-213ENST00000530784 PPP1R3CQ9UQK1 317 aa5.71□□□□□ -1.5
CSDE1-213ENST00000530784 TMED3Q9Y3Q3 217 aa5.71□□□□□ -1.5
CSDE1-213ENST00000530784 HRNRQ86YZ3 2850 aaPredicted RBP5.71□□□□□ -1.5
CSDE1-213ENST00000530784 ZNF407Q9C0G0 2248 aa5.71□□□□□ -1.5
CSDE1-213ENST00000530784 INTS1Q8N201 2190 aaKnown RBP5.7□□□□□ -1.5
CSDE1-213ENST00000530784 NCKAP5O14513 1909 aa5.7□□□□□ -1.5
CSDE1-213ENST00000530784 ZFHX3Q15911 3703 aa5.7□□□□□ -1.5
CSDE1-213ENST00000530784 A0A1B0GVY2 172 aa5.7□□□□□ -1.5
CSDE1-213ENST00000530784 DEFB108AA8MXU0 73 aa5.7□□□□□ -1.5
CSDE1-213ENST00000530784 UBE2CO00762 179 aa5.7□□□□□ -1.5
CSDE1-213ENST00000530784 LY6G6DO95868 133 aa5.7□□□□□ -1.5
CSDE1-213ENST00000530784 TGM6O95932 706 aa5.7□□□□□ -1.5
CSDE1-213ENST00000530784 POU2F1P14859 743 aa5.7□□□□□ -1.5
CSDE1-213ENST00000530784 CRYGSP22914 178 aa5.7□□□□□ -1.5
CSDE1-213ENST00000530784 DPP4P27487 766 aa5.7□□□□□ -1.5
CSDE1-213ENST00000530784 CD79BP40259 229 aa5.7□□□□□ -1.5
CSDE1-213ENST00000530784 OPRL1P41146 370 aa5.7□□□□□ -1.5
CSDE1-213ENST00000530784 MAGEA12P43365 314 aa5.7□□□□□ -1.5
CSDE1-213ENST00000530784 ALDH3A2P51648 485 aa5.7□□□□□ -1.5
CSDE1-213ENST00000530784 DSCR4P56555 118 aaPredicted RBP5.7□□□□□ -1.5
CSDE1-213ENST00000530784 MRPS22P82650 360 aaKnown RBP5.7□□□□□ -1.5
CSDE1-213ENST00000530784 TRADDQ15628 312 aa5.7□□□□□ -1.5
CSDE1-213ENST00000530784 BCL2A1Q16548 175 aa5.7□□□□□ -1.5
CSDE1-213ENST00000530784 ACKR1Q16570 336 aa5.7□□□□□ -1.5
CSDE1-213ENST00000530784 VWC2Q2TAL6 325 aa5.7□□□□□ -1.5
CSDE1-213ENST00000530784 UGT3A2Q3SY77 523 aa5.7□□□□□ -1.5
CSDE1-213ENST00000530784 PDLIM3Q53GG5 364 aaPredicted RBP5.7□□□□□ -1.5
CSDE1-213ENST00000530784 RAET1LQ5VY80 246 aa5.7□□□□□ -1.5
CSDE1-213ENST00000530784 SLC25A47Q6Q0C1 308 aa5.7□□□□□ -1.5
CSDE1-213ENST00000530784 NPSR1Q6W5P4 371 aa5.7□□□□□ -1.5
CSDE1-213ENST00000530784 RBPMS2Q6ZRY4 209 aaKnown RBP5.7□□□□□ -1.5
CSDE1-213ENST00000530784 RPS27LQ71UM5 84 aaKnown RBP5.7□□□□□ -1.5
CSDE1-213ENST00000530784 THAP8Q8NA92 274 aa5.7□□□□□ -1.5
CSDE1-213ENST00000530784 OR9A2Q8NGT5 310 aa5.7□□□□□ -1.5
CSDE1-213ENST00000530784 EXOSC8Q96B26 276 aaKnown RBP5.7□□□□□ -1.5
CSDE1-213ENST00000530784 MOB3AQ96BX8 217 aa5.7□□□□□ -1.5
CSDE1-213ENST00000530784 EFHD2Q96C19 240 aaPredicted RBP5.7□□□□□ -1.5
CSDE1-213ENST00000530784 ERP27Q96DN0 273 aa5.7□□□□□ -1.5
CSDE1-213ENST00000530784 STARD4Q96DR4 205 aa5.7□□□□□ -1.5
CSDE1-213ENST00000530784 PGM2Q96G03 612 aa5.7□□□□□ -1.5
CSDE1-213ENST00000530784 VSTM2LQ96N03 204 aa5.7□□□□□ -1.5
CSDE1-213ENST00000530784 ZNF681Q96N22 645 aa5.7□□□□□ -1.5
CSDE1-213ENST00000530784 WFIKKN1Q96NZ8 548 aa5.7□□□□□ -1.5
CSDE1-213ENST00000530784 HBEGFQ99075 208 aa5.7□□□□□ -1.5
CSDE1-213ENST00000530784 SLC39A3Q9BRY0 314 aa5.7□□□□□ -1.5
CSDE1-213ENST00000530784 DGCR6LQ9BY27 220 aa5.7□□□□□ -1.5
CSDE1-213ENST00000530784 OPN3Q9H1Y3 402 aaPredicted RBP5.7□□□□□ -1.5
CSDE1-213ENST00000530784 ANKRA2Q9H9E1 313 aa5.7□□□□□ -1.5
CSDE1-213ENST00000530784 MYNNQ9NPC7 610 aa5.7□□□□□ -1.5
CSDE1-213ENST00000530784 MRPS18CQ9Y3D5 142 aaKnown RBP5.7□□□□□ -1.5
CSDE1-213ENST00000530784 OR10H1Q9Y4A9 318 aa5.7□□□□□ -1.5
CSDE1-213ENST00000530784 PRRC2AP48634 2157 aaKnown RBP5.7□□□□□ -1.5
CSDE1-213ENST00000530784 ANKHD1Q8IWZ3 2542 aaKnown RBP5.7□□□□□ -1.5
CSDE1-213ENST00000530784 ARHGAP21Q5T5U3 1957 aa5.69□□□□□ -1.5
CSDE1-213ENST00000530784 UQCRHLA0A096LP55 91 aa5.69□□□□□ -1.5
CSDE1-213ENST00000530784 GNG14A0A1W2PPG7 69 aa5.69□□□□□ -1.5
CSDE1-213ENST00000530784 A0A1W2PPM1 405 aa5.69□□□□□ -1.5
CSDE1-213ENST00000530784 TRIM64A6NGJ6 449 aa5.69□□□□□ -1.5
CSDE1-213ENST00000530784 TRIM64BA6NI03 449 aa5.69□□□□□ -1.5
CSDE1-213ENST00000530784 C17orf51A8MQB3 221 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms