RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 ARHGDIAP52565 204 aa7.57□□□□□ -1.2
VPS11-203ENST00000529545 BTG1P62324 171 aa7.57□□□□□ -1.2
VPS11-203ENST00000529545 PAX8Q06710 450 aa7.57□□□□□ -1.2
VPS11-203ENST00000529545 SRSF4Q08170 494 aaKnown RBP7.57□□□□□ -1.2
VPS11-203ENST00000529545 STX3Q13277 289 aa7.57□□□□□ -1.2
VPS11-203ENST00000529545 PDCD1Q15116 288 aa7.57□□□□□ -1.2
VPS11-203ENST00000529545 GTDC1Q4AE62 458 aa7.57□□□□□ -1.2
VPS11-203ENST00000529545 PABPC1L2AQ5JQF8 200 aa7.57□□□□□ -1.2
VPS11-203ENST00000529545 MBNL2Q5VZF2 373 aaKnown RBP7.57□□□□□ -1.2
VPS11-203ENST00000529545 FAM205BPQ63HN1 556 aa7.57□□□□□ -1.2
VPS11-203ENST00000529545 NXNQ6DKJ4 435 aa7.57□□□□□ -1.2
VPS11-203ENST00000529545 DHRS4L2Q6PKH6 230 aa7.57□□□□□ -1.2
VPS11-203ENST00000529545 LRRN1Q6UXK5 716 aa7.57□□□□□ -1.2
VPS11-203ENST00000529545 JAZF1Q86VZ6 243 aa7.57□□□□□ -1.2
VPS11-203ENST00000529545 LRRC28Q86X40 367 aaPredicted RBP7.57□□□□□ -1.2
VPS11-203ENST00000529545 MUC20Q8N307 709 aaPredicted RBP7.57□□□□□ -1.2
VPS11-203ENST00000529545 BHLHE22Q8NFJ8 381 aaPredicted RBP7.57□□□□□ -1.2
VPS11-203ENST00000529545 ABHD4Q8TB40 342 aa7.57□□□□□ -1.2
VPS11-203ENST00000529545 SLC25A40Q8TBP6 338 aa7.57□□□□□ -1.2
VPS11-203ENST00000529545 KLF14Q8TD94 323 aaPredicted RBP7.57□□□□□ -1.2
VPS11-203ENST00000529545 MCHR2Q969V1 340 aa7.57□□□□□ -1.2
VPS11-203ENST00000529545 MARS2Q96GW9 593 aaKnown RBP7.57□□□□□ -1.2
VPS11-203ENST00000529545 ZNF607Q96SK3 696 aa7.57□□□□□ -1.2
VPS11-203ENST00000529545 OR2J1Q9GZK6 312 aa7.57□□□□□ -1.2
VPS11-203ENST00000529545 C20orf27Q9GZN8 174 aa7.57□□□□□ -1.2
VPS11-203ENST00000529545 EVA1AQ9H8M9 152 aa7.57□□□□□ -1.2
VPS11-203ENST00000529545 NANSQ9NR45 359 aa7.57□□□□□ -1.2
VPS11-203ENST00000529545 TMEM106BQ9NUM4 274 aa7.57□□□□□ -1.2
VPS11-203ENST00000529545 PNPOQ9NVS9 261 aa7.57□□□□□ -1.2
VPS11-203ENST00000529545 TRIM33Q9UPN9 1127 aa7.57□□□□□ -1.2
VPS11-203ENST00000529545 LRCH1Q9Y2L9 728 aa7.57□□□□□ -1.2
VPS11-203ENST00000529545 TRAV40A0A0B4J280 105 aa7.56□□□□□ -1.2
VPS11-203ENST00000529545 CLPSL1A2RUU4 121 aa7.56□□□□□ -1.2
VPS11-203ENST00000529545 SRRM5B3KS81 715 aa7.56□□□□□ -1.2
VPS11-203ENST00000529545 MCIDASD6RGH6 385 aa7.56□□□□□ -1.2
VPS11-203ENST00000529545 SDHDO14521 159 aa7.56□□□□□ -1.2
VPS11-203ENST00000529545 SURF4O15260 269 aa7.56□□□□□ -1.2
VPS11-203ENST00000529545 TIMM8AO60220 97 aaPredicted RBP7.56□□□□□ -1.2
VPS11-203ENST00000529545 SERPINB7O75635 380 aa7.56□□□□□ -1.2
VPS11-203ENST00000529545 CH25HO95992 272 aa7.56□□□□□ -1.2
VPS11-203ENST00000529545 NGFP01138 241 aa7.56□□□□□ -1.2
VPS11-203ENST00000529545 MMP7P09237 267 aaPredicted RBP7.56□□□□□ -1.2
VPS11-203ENST00000529545 PGA4P0DJD7 388 aa7.56□□□□□ -1.2
VPS11-203ENST00000529545 PGA3P0DJD8 388 aa7.56□□□□□ -1.2
VPS11-203ENST00000529545 CD80P33681 288 aa7.56□□□□□ -1.2
VPS11-203ENST00000529545 MDH2P40926 338 aaKnown RBP7.56□□□□□ -1.2
VPS11-203ENST00000529545 CDH12P55289 794 aa7.56□□□□□ -1.2
VPS11-203ENST00000529545 SEC61A1P61619 476 aaKnown RBP7.56□□□□□ -1.2
VPS11-203ENST00000529545 PPP1CBP62140 327 aa7.56□□□□□ -1.2
VPS11-203ENST00000529545 MELKQ14680 651 aa7.56□□□□□ -1.2
VPS11-203ENST00000529545 FBLN7Q53RD9 439 aa7.56□□□□□ -1.2
VPS11-203ENST00000529545 MTX3Q5HYI7 312 aa7.56□□□□□ -1.2
VPS11-203ENST00000529545 GCNT6Q5T4J0 391 aa7.56□□□□□ -1.2
VPS11-203ENST00000529545 HHATQ5VTY9 493 aa7.56□□□□□ -1.2
VPS11-203ENST00000529545 REEP3Q6NUK4 255 aa7.56□□□□□ -1.2
VPS11-203ENST00000529545 ARL9Q6T311 187 aa7.56□□□□□ -1.2
VPS11-203ENST00000529545 FIP1L1Q6UN15 594 aaKnown RBP7.56□□□□□ -1.2
VPS11-203ENST00000529545 HDDC2Q7Z4H3 204 aa7.56□□□□□ -1.2
VPS11-203ENST00000529545 ZNF101Q8IZC7 436 aa7.56□□□□□ -1.2
VPS11-203ENST00000529545 NFKBIDQ8NI38 313 aa7.56□□□□□ -1.2
VPS11-203ENST00000529545 VPS33AQ96AX1 596 aa7.56□□□□□ -1.2
VPS11-203ENST00000529545 UPRTQ96BW1 309 aa7.56□□□□□ -1.2
VPS11-203ENST00000529545 THOC1Q96FV9 657 aaKnown RBP7.56□□□□□ -1.2
VPS11-203ENST00000529545 PLEKHA8Q96JA3 519 aa7.56□□□□□ -1.2
VPS11-203ENST00000529545 POM121L2Q96KW2 1035 aa7.56□□□□□ -1.2
VPS11-203ENST00000529545 SAMD8Q96LT4 415 aa7.56□□□□□ -1.2
VPS11-203ENST00000529545 SORT1Q99523 831 aa7.56□□□□□ -1.2
VPS11-203ENST00000529545 ARHGDIGQ99819 225 aa7.56□□□□□ -1.2
VPS11-203ENST00000529545 CITED1Q99966 193 aa7.56□□□□□ -1.2
VPS11-203ENST00000529545 RBM4BQ9BQ04 359 aaKnown RBP7.56□□□□□ -1.2
VPS11-203ENST00000529545 SIAEQ9HAT2 523 aa7.56□□□□□ -1.2
VPS11-203ENST00000529545 ELOVL3Q9HB03 270 aa7.56□□□□□ -1.2
VPS11-203ENST00000529545 MSL2Q9HCI7 577 aa7.56□□□□□ -1.2
VPS11-203ENST00000529545 NOX4Q9NPH5 578 aa7.56□□□□□ -1.2
VPS11-203ENST00000529545 TNFRSF19Q9NS68 423 aa7.56□□□□□ -1.2
VPS11-203ENST00000529545 HAO1Q9UJM8 370 aa7.56□□□□□ -1.2
VPS11-203ENST00000529545 A0A1W2PRG6 482 aa7.55□□□□□ -1.2
VPS11-203ENST00000529545 CENPBD1B2RD01 187 aa7.55□□□□□ -1.2
VPS11-203ENST00000529545 HDAC3O15379 428 aa7.55□□□□□ -1.2
VPS11-203ENST00000529545 TPST1O60507 370 aa7.55□□□□□ -1.2
VPS11-203ENST00000529545 ERLIN1O75477 346 aa7.55□□□□□ -1.2
VPS11-203ENST00000529545 NDUFA7O95182 113 aa7.55□□□□□ -1.2
VPS11-203ENST00000529545 PLATP00750 562 aa7.55□□□□□ -1.2
VPS11-203ENST00000529545 UMPSP11172 480 aa7.55□□□□□ -1.2
VPS11-203ENST00000529545 NR2C1P13056 603 aa7.55□□□□□ -1.2
VPS11-203ENST00000529545 RPS2P15880 293 aaKnown RBP7.55□□□□□ -1.2
VPS11-203ENST00000529545 ZNF32P17041 273 aa7.55□□□□□ -1.2
VPS11-203ENST00000529545 GSTM3P21266 225 aa7.55□□□□□ -1.2
VPS11-203ENST00000529545 BGNP21810 368 aa7.55□□□□□ -1.2
VPS11-203ENST00000529545 EPHA3P29320 983 aa7.55□□□□□ -1.2
VPS11-203ENST00000529545 WNT5AP41221 380 aa7.55□□□□□ -1.2
VPS11-203ENST00000529545 GUCA1AP43080 201 aaPredicted RBP7.55□□□□□ -1.2
VPS11-203ENST00000529545 POLR2JP52435 117 aaKnown RBP7.55□□□□□ -1.2
VPS11-203ENST00000529545 BPIFB3P59826 476 aa7.55□□□□□ -1.2
VPS11-203ENST00000529545 GNB2P62879 340 aa7.55□□□□□ -1.2
VPS11-203ENST00000529545 CDK6Q00534 326 aa7.55□□□□□ -1.2
VPS11-203ENST00000529545 CDK5R2Q13319 367 aa7.55□□□□□ -1.2
VPS11-203ENST00000529545 HLXQ14774 488 aaPredicted RBP7.55□□□□□ -1.2
VPS11-203ENST00000529545 ZMYND11Q15326 602 aa7.55□□□□□ -1.2
VPS11-203ENST00000529545 TAF11Q15544 211 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms