RNA–Protein interactions for RNA: ENST00000527599.1

CTNND1-217, Transcript of catenin delta 1, humanhuman

TSL 2

Gene CTNND1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-217ENST00000527599 POLR3HQ9Y535 204 aaPredicted RBP4.79□□□□□ -1.64
CTNND1-217ENST00000527599 PLXND1Q9Y4D7 1925 aa4.78□□□□□ -1.64
CTNND1-217ENST00000527599 NUP214P35658 2090 aaPredicted RBP4.78□□□□□ -1.64
CTNND1-217ENST00000527599 HEATR5BQ9P2D3 2071 aa4.78□□□□□ -1.64
CTNND1-217ENST00000527599 TCRBV3S1A0A5B6 114 aa4.78□□□□□ -1.64
CTNND1-217ENST00000527599 SLC5A10A0PJK1 596 aa4.78□□□□□ -1.64
CTNND1-217ENST00000527599 PRORSD1PA6NEY8 169 aa4.78□□□□□ -1.64
CTNND1-217ENST00000527599 OR2AG2A6NM03 316 aa4.78□□□□□ -1.64
CTNND1-217ENST00000527599 LOC730098B7Z3J9 87 aa4.78□□□□□ -1.64
CTNND1-217ENST00000527599 PANO1I0J062 215 aa4.78□□□□□ -1.64
CTNND1-217ENST00000527599 SLC28A1O00337 649 aa4.78□□□□□ -1.64
CTNND1-217ENST00000527599 PSIP1O75475 530 aaKnown RBP4.78□□□□□ -1.64
CTNND1-217ENST00000527599 CLDN9O95484 217 aa4.78□□□□□ -1.64
CTNND1-217ENST00000527599 HIST1H2AGP0C0S8 130 aaPredicted RBP4.78□□□□□ -1.64
CTNND1-217ENST00000527599 IL12AP29459 219 aa4.78□□□□□ -1.64
CTNND1-217ENST00000527599 POLR2JP52435 117 aaKnown RBP4.78□□□□□ -1.64
CTNND1-217ENST00000527599 KCNK10P57789 538 aa4.78□□□□□ -1.64
CTNND1-217ENST00000527599 PFN3P60673 137 aa4.78□□□□□ -1.64
CTNND1-217ENST00000527599 RPL38P63173 70 aaKnown RBP4.78□□□□□ -1.64
CTNND1-217ENST00000527599 MRPS22P82650 360 aaKnown RBP4.78□□□□□ -1.64
CTNND1-217ENST00000527599 SPCS2Q15005 226 aa4.78□□□□□ -1.64
CTNND1-217ENST00000527599 ZNF658BQ4V348 819 aaPredicted RBP4.78□□□□□ -1.64
CTNND1-217ENST00000527599 BCL7AQ4VC05 210 aa4.78□□□□□ -1.64
CTNND1-217ENST00000527599 NHSL2Q5HYW2 709 aa4.78□□□□□ -1.64
CTNND1-217ENST00000527599 PAGE3Q5JUK9 113 aa4.78□□□□□ -1.64
CTNND1-217ENST00000527599 OGFRL1Q5TC84 451 aaPredicted RBP4.78□□□□□ -1.64
CTNND1-217ENST00000527599 IL23RQ5VWK5 629 aa4.78□□□□□ -1.64
CTNND1-217ENST00000527599 NEK5Q6P3R8 708 aa4.78□□□□□ -1.64
CTNND1-217ENST00000527599 TMEM220Q6QAJ8 160 aa4.78□□□□□ -1.64
CTNND1-217ENST00000527599 IZUMO2Q6UXV1 221 aa4.78□□□□□ -1.64
CTNND1-217ENST00000527599 PRSS48Q7RTY5 328 aa4.78□□□□□ -1.64
CTNND1-217ENST00000527599 SPATA24Q86W54 205 aa4.78□□□□□ -1.64
CTNND1-217ENST00000527599 ARL10Q8N8L6 244 aa4.78□□□□□ -1.64
CTNND1-217ENST00000527599 Q8N9G6 341 aaPredicted RBP4.78□□□□□ -1.64
CTNND1-217ENST00000527599 FNDC5Q8NAU1 212 aa4.78□□□□□ -1.64
CTNND1-217ENST00000527599 MCOLN3Q8TDD5 553 aa4.78□□□□□ -1.64
CTNND1-217ENST00000527599 SKA2Q8WVK7 121 aaPredicted RBP4.78□□□□□ -1.64
CTNND1-217ENST00000527599 ASZ1Q8WWH4 475 aa4.78□□□□□ -1.64
CTNND1-217ENST00000527599 TMEM159Q96B96 161 aa4.78□□□□□ -1.64
CTNND1-217ENST00000527599 LRRC58Q96CX6 371 aa4.78□□□□□ -1.64
CTNND1-217ENST00000527599 MRPL38Q96DV4 380 aaKnown RBP4.78□□□□□ -1.64
CTNND1-217ENST00000527599 DUS3LQ96G46 650 aaKnown RBP4.78□□□□□ -1.64
CTNND1-217ENST00000527599 TEX37Q96LM6 180 aa4.78□□□□□ -1.64
CTNND1-217ENST00000527599 HBEGFQ99075 208 aa4.78□□□□□ -1.64
CTNND1-217ENST00000527599 ZNF184Q99676 751 aaPredicted RBP4.78□□□□□ -1.64
CTNND1-217ENST00000527599 P2RY13Q9BPV8 354 aa4.78□□□□□ -1.64
CTNND1-217ENST00000527599 ECSITQ9BQ95 431 aa4.78□□□□□ -1.64
CTNND1-217ENST00000527599 ACTR8Q9H981 624 aa4.78□□□□□ -1.64
CTNND1-217ENST00000527599 PRSS16Q9NQE7 514 aa4.78□□□□□ -1.64
CTNND1-217ENST00000527599 DNAJC11Q9NVH1 559 aa4.78□□□□□ -1.64
CTNND1-217ENST00000527599 GID8Q9NWU2 228 aa4.78□□□□□ -1.64
CTNND1-217ENST00000527599 CMTM6Q9NX76 183 aa4.78□□□□□ -1.64
CTNND1-217ENST00000527599 TMEM9Q9P0T7 183 aa4.78□□□□□ -1.64
CTNND1-217ENST00000527599 RIMS3Q9UJD0 308 aa4.78□□□□□ -1.64
CTNND1-217ENST00000527599 ZNF490Q9ULM2 529 aaPredicted RBP4.78□□□□□ -1.64
CTNND1-217ENST00000527599 MKI67P46013 3256 aaKnown RBP4.77□□□□□ -1.65
CTNND1-217ENST00000527599 CEP290O15078 2479 aa4.77□□□□□ -1.65
CTNND1-217ENST00000527599 C15orf38-AP3S2A0A0A6YYH1 394 aa4.77□□□□□ -1.65
CTNND1-217ENST00000527599 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.77□□□□□ -1.65
CTNND1-217ENST00000527599 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.77□□□□□ -1.65
CTNND1-217ENST00000527599 KRT87PA6NCN2 255 aa4.77□□□□□ -1.65
CTNND1-217ENST00000527599 TSPAN2O60636 221 aa4.77□□□□□ -1.65
CTNND1-217ENST00000527599 SNRNP200O75643 2136 aaKnown RBP4.77□□□□□ -1.65
CTNND1-217ENST00000527599 PDYNP01213 254 aa4.77□□□□□ -1.65
CTNND1-217ENST00000527599 CATP04040 527 aaKnown RBP4.77□□□□□ -1.65
CTNND1-217ENST00000527599 APODP05090 189 aa4.77□□□□□ -1.65
CTNND1-217ENST00000527599 S100A6P06703 90 aa4.77□□□□□ -1.65
CTNND1-217ENST00000527599 PSMC3P17980 439 aa4.77□□□□□ -1.65
CTNND1-217ENST00000527599 TCN1P20061 433 aaPredicted RBP4.77□□□□□ -1.65
CTNND1-217ENST00000527599 ATP6V1B2P21281 511 aa4.77□□□□□ -1.65
CTNND1-217ENST00000527599 UCP1P25874 307 aa4.77□□□□□ -1.65
CTNND1-217ENST00000527599 PBLDP30039 288 aaPredicted RBP4.77□□□□□ -1.65
CTNND1-217ENST00000527599 TRIM23P36406 574 aa4.77□□□□□ -1.65
CTNND1-217ENST00000527599 RANBP1P43487 201 aa4.77□□□□□ -1.65
CTNND1-217ENST00000527599 GPR1P46091 355 aa4.77□□□□□ -1.65
CTNND1-217ENST00000527599 BDKRB1P46663 353 aa4.77□□□□□ -1.65
CTNND1-217ENST00000527599 GNPDA1P46926 289 aa4.77□□□□□ -1.65
CTNND1-217ENST00000527599 ATXN3P54252 364 aaPredicted RBP4.77□□□□□ -1.65
CTNND1-217ENST00000527599 HMGCS1Q01581 520 aa4.77□□□□□ -1.65
CTNND1-217ENST00000527599 BNIP2Q12982 314 aa4.77□□□□□ -1.65
CTNND1-217ENST00000527599 CHIT1Q13231 466 aa4.77□□□□□ -1.65
CTNND1-217ENST00000527599 TRIP10Q15642 601 aa4.77□□□□□ -1.65
CTNND1-217ENST00000527599 IMPG1Q17R60 797 aa4.77□□□□□ -1.65
CTNND1-217ENST00000527599 CCSMST1Q4G0I0 132 aa4.77□□□□□ -1.65
CTNND1-217ENST00000527599 SFT2D3Q587I9 215 aa4.77□□□□□ -1.65
CTNND1-217ENST00000527599 PIP5KL1Q5T9C9 394 aa4.77□□□□□ -1.65
CTNND1-217ENST00000527599 LPCAT4Q643R3 524 aa4.77□□□□□ -1.65
CTNND1-217ENST00000527599 RAET1GQ6H3X3 334 aa4.77□□□□□ -1.65
CTNND1-217ENST00000527599 LCN8Q6JVE9 175 aa4.77□□□□□ -1.65
CTNND1-217ENST00000527599 ARPINQ7Z6K5 226 aa4.77□□□□□ -1.65
CTNND1-217ENST00000527599 TMEM126BQ8IUX1 230 aa4.77□□□□□ -1.65
CTNND1-217ENST00000527599 MMAAQ8IVH4 418 aaKnown RBP4.77□□□□□ -1.65
CTNND1-217ENST00000527599 TUSC5Q8IXB3 177 aa4.77□□□□□ -1.65
CTNND1-217ENST00000527599 LINC00469Q8N7U9 141 aa4.77□□□□□ -1.65
CTNND1-217ENST00000527599 CXorf40AQ8TE69 158 aa4.77□□□□□ -1.65
CTNND1-217ENST00000527599 SELENOMQ8WWX9 145 aa4.77□□□□□ -1.65
CTNND1-217ENST00000527599 RAB7BQ96AH8 199 aa4.77□□□□□ -1.65
CTNND1-217ENST00000527599 ELSPBP1Q96BH3 223 aa4.77□□□□□ -1.65
CTNND1-217ENST00000527599 BIRC7Q96CA5 298 aa4.77□□□□□ -1.65
CTNND1-217ENST00000527599 FCRL1Q96LA6 429 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms