RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 MARCH3Q86UD3 253 aa10.5□□□□□ -0.73
LINC01001-201ENST00000526704 GPX8Q8TED1 209 aa10.5□□□□□ -0.73
LINC01001-201ENST00000526704 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.5□□□□□ -0.73
LINC01001-201ENST00000526704 METTL21AQ8WXB1 218 aa10.5□□□□□ -0.73
LINC01001-201ENST00000526704 ASB17Q8WXJ9 295 aa10.5□□□□□ -0.73
LINC01001-201ENST00000526704 TGM7Q96PF1 710 aa10.5□□□□□ -0.73
LINC01001-201ENST00000526704 CHST6Q9GZX3 395 aa10.5□□□□□ -0.73
LINC01001-201ENST00000526704 FXYD6Q9H0Q3 95 aa10.5□□□□□ -0.73
LINC01001-201ENST00000526704 MED9Q9NWA0 146 aa10.5□□□□□ -0.73
LINC01001-201ENST00000526704 GTF2A1LQ9UNN4 478 aa10.5□□□□□ -0.73
LINC01001-201ENST00000526704 IGKV3D-11A0A0A0MRZ8 115 aa10.5□□□□□ -0.73
LINC01001-201ENST00000526704 SHISA7A6NL88 538 aa10.5□□□□□ -0.73
LINC01001-201ENST00000526704 TMEM150CB9EJG8 249 aa10.5□□□□□ -0.73
LINC01001-201ENST00000526704 SPARCP09486 303 aa10.5□□□□□ -0.73
LINC01001-201ENST00000526704 PPP3CBP16298 524 aa10.5□□□□□ -0.73
LINC01001-201ENST00000526704 CTLA4P16410 223 aa10.5□□□□□ -0.73
LINC01001-201ENST00000526704 CENPAP49450 140 aa10.5□□□□□ -0.73
LINC01001-201ENST00000526704 RPL27P61353 136 aaKnown RBP10.5□□□□□ -0.73
LINC01001-201ENST00000526704 BIKQ13323 160 aa10.5□□□□□ -0.73
LINC01001-201ENST00000526704 SGCBQ16585 318 aa10.5□□□□□ -0.73
LINC01001-201ENST00000526704 TMEM225Q6GV28 225 aa10.5□□□□□ -0.73
LINC01001-201ENST00000526704 STEAP1BQ6NZ63 245 aa10.5□□□□□ -0.73
LINC01001-201ENST00000526704 NDUFAF7Q7L592 441 aa10.5□□□□□ -0.73
LINC01001-201ENST00000526704 PRSS42Q7Z5A4 293 aa10.5□□□□□ -0.73
LINC01001-201ENST00000526704 OR1J4Q8NGS1 313 aa10.5□□□□□ -0.73
LINC01001-201ENST00000526704 OR8S1Q8NH09 359 aa10.5□□□□□ -0.73
LINC01001-201ENST00000526704 SCARB1Q8WTV0 552 aa10.5□□□□□ -0.73
LINC01001-201ENST00000526704 SLC25A36Q96CQ1 311 aa10.5□□□□□ -0.73
LINC01001-201ENST00000526704 KLHDC7BQ96G42 594 aa10.5□□□□□ -0.73
LINC01001-201ENST00000526704 NUDT9Q9BW91 350 aa10.5□□□□□ -0.73
LINC01001-201ENST00000526704 ATG5Q9H1Y0 275 aa10.5□□□□□ -0.73
LINC01001-201ENST00000526704 EPHA6Q9UF33 1036 aa10.5□□□□□ -0.73
LINC01001-201ENST00000526704 LILRA5A6NI73 299 aa10.49□□□□□ -0.73
LINC01001-201ENST00000526704 POM121CA8CG34 1229 aa10.49□□□□□ -0.73
LINC01001-201ENST00000526704 ITGB2P05107 769 aa10.49□□□□□ -0.73
LINC01001-201ENST00000526704 GABRA1P14867 456 aa10.49□□□□□ -0.73
LINC01001-201ENST00000526704 IL12BP29460 328 aa10.49□□□□□ -0.73
LINC01001-201ENST00000526704 OR1D4P47884 311 aa10.49□□□□□ -0.73
LINC01001-201ENST00000526704 MAP2K6P52564 334 aa10.49□□□□□ -0.73
LINC01001-201ENST00000526704 ROM1Q03395 351 aa10.49□□□□□ -0.73
LINC01001-201ENST00000526704 SSBP1Q04837 148 aaKnown RBP10.49□□□□□ -0.73
LINC01001-201ENST00000526704 TOMM20Q15388 145 aa10.49□□□□□ -0.73
LINC01001-201ENST00000526704 ETFDHQ16134 617 aa10.49□□□□□ -0.73
LINC01001-201ENST00000526704 ARHGAP40Q5TG30 622 aa10.49□□□□□ -0.73
LINC01001-201ENST00000526704 SLC18B1Q6NT16 456 aa10.49□□□□□ -0.73
LINC01001-201ENST00000526704 TSSK4Q6SA08 328 aa10.49□□□□□ -0.73
LINC01001-201ENST00000526704 MAMDC2Q7Z304 686 aaPredicted RBP10.49□□□□□ -0.73
LINC01001-201ENST00000526704 MDGA2Q7Z553 956 aa10.49□□□□□ -0.73
LINC01001-201ENST00000526704 KRT77Q7Z794 578 aa10.49□□□□□ -0.73
LINC01001-201ENST00000526704 CATSPERDQ86XM0 798 aa10.49□□□□□ -0.73
LINC01001-201ENST00000526704 C9orf40Q8IXQ3 194 aa10.49□□□□□ -0.73
LINC01001-201ENST00000526704 GABRG1Q8N1C3 465 aa10.49□□□□□ -0.73
LINC01001-201ENST00000526704 COQ8AQ8NI60 647 aa10.49□□□□□ -0.73
LINC01001-201ENST00000526704 SLC7A5P2Q9GIP4 190 aa10.49□□□□□ -0.73
LINC01001-201ENST00000526704 ARL6Q9H0F7 186 aa10.49□□□□□ -0.73
LINC01001-201ENST00000526704 C1orf198Q9H425 327 aa10.49□□□□□ -0.73
LINC01001-201ENST00000526704 EXO5Q9H790 373 aa10.49□□□□□ -0.73
LINC01001-201ENST00000526704 C8orf33Q9H7E9 229 aaPredicted RBP10.49□□□□□ -0.73
LINC01001-201ENST00000526704 TAS2R4Q9NYW5 299 aa10.49□□□□□ -0.73
LINC01001-201ENST00000526704 VSX1Q9NZR4 365 aaPredicted RBP10.49□□□□□ -0.73
LINC01001-201ENST00000526704 MRTO4Q9UKD2 239 aaKnown RBP10.49□□□□□ -0.73
LINC01001-201ENST00000526704 DHDHQ9UQ10 334 aa10.49□□□□□ -0.73
LINC01001-201ENST00000526704 MMACHCQ9Y4U1 282 aa10.49□□□□□ -0.73
LINC01001-201ENST00000526704 TRIOO75962 3097 aa10.49□□□□□ -0.73
LINC01001-201ENST00000526704 A0A1W2PPC4 97 aa10.49□□□□□ -0.73
LINC01001-201ENST00000526704 TLCD2A6NGC4 264 aa10.49□□□□□ -0.73
LINC01001-201ENST00000526704 TSPAN2O60636 221 aa10.49□□□□□ -0.73
LINC01001-201ENST00000526704 SLC16A7O60669 478 aa10.49□□□□□ -0.73
LINC01001-201ENST00000526704 CALCRP30988 508 aa10.49□□□□□ -0.73
LINC01001-201ENST00000526704 BAMBIQ13145 260 aa10.49□□□□□ -0.73
LINC01001-201ENST00000526704 EBPQ15125 230 aaKnown RBP10.49□□□□□ -0.73
LINC01001-201ENST00000526704 MPPED2Q15777 294 aa10.49□□□□□ -0.73
LINC01001-201ENST00000526704 STK35Q8TDR2 534 aa10.49□□□□□ -0.73
LINC01001-201ENST00000526704 TNFAIP8L1Q8WVP5 186 aa10.49□□□□□ -0.73
LINC01001-201ENST00000526704 ASB5Q8WWX0 329 aa10.49□□□□□ -0.73
LINC01001-201ENST00000526704 SLC38A3Q99624 504 aa10.49□□□□□ -0.73
LINC01001-201ENST00000526704 POFUT1Q9H488 388 aa10.49□□□□□ -0.73
LINC01001-201ENST00000526704 PDE7BQ9NP56 450 aa10.49□□□□□ -0.73
LINC01001-201ENST00000526704 LRP12Q9Y561 859 aa10.49□□□□□ -0.73
LINC01001-201ENST00000526704 ADAMTS20P59510 1910 aa10.48□□□□□ -0.73
LINC01001-201ENST00000526704 VCANP13611 3396 aa10.48□□□□□ -0.73
LINC01001-201ENST00000526704 A0A1W2PPC1 479 aa10.48□□□□□ -0.73
LINC01001-201ENST00000526704 ATP6V1G2-DDX39BF2Z307 99 aa10.48□□□□□ -0.73
LINC01001-201ENST00000526704 NPIPB7O75200 414 aa10.48□□□□□ -0.73
LINC01001-201ENST00000526704 SLC25A12O75746 678 aa10.48□□□□□ -0.73
LINC01001-201ENST00000526704 NUDT14O95848 222 aa10.48□□□□□ -0.73
LINC01001-201ENST00000526704 MT-ATP6P00846 226 aa10.48□□□□□ -0.73
LINC01001-201ENST00000526704 LPLP06858 475 aa10.48□□□□□ -0.73
LINC01001-201ENST00000526704 HOXD4P09016 255 aaPredicted RBP10.48□□□□□ -0.73
LINC01001-201ENST00000526704 IGFBP3P17936 291 aaPredicted RBP10.48□□□□□ -0.73
LINC01001-201ENST00000526704 FSTP19883 344 aa10.48□□□□□ -0.73
LINC01001-201ENST00000526704 PPM1FP49593 454 aaPredicted RBP10.48□□□□□ -0.73
LINC01001-201ENST00000526704 ADAM8P78325 824 aa10.48□□□□□ -0.73
LINC01001-201ENST00000526704 ZP2Q05996 745 aa10.48□□□□□ -0.73
LINC01001-201ENST00000526704 GK2Q14410 553 aaPredicted RBP10.48□□□□□ -0.73
LINC01001-201ENST00000526704 HYAL4Q2M3T9 481 aa10.48□□□□□ -0.73
LINC01001-201ENST00000526704 C4orf46Q504U0 113 aa10.48□□□□□ -0.73
LINC01001-201ENST00000526704 GSG1LQ6UXU4 331 aa10.48□□□□□ -0.73
LINC01001-201ENST00000526704 Q6ZS52 159 aa10.48□□□□□ -0.73
LINC01001-201ENST00000526704 TTLL10Q6ZVT0 673 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms