RNA–Protein interactions for RNA: ENST00000526653.1

SF3B2-205, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-205ENST00000526653 SH3BGRP55822 239 aaPredicted RBP4.41□□□□□ -1.7
SF3B2-205ENST00000526653 RPL15P61313 204 aaKnown RBP4.41□□□□□ -1.7
SF3B2-205ENST00000526653 GUCY2DQ02846 1103 aa4.41□□□□□ -1.7
SF3B2-205ENST00000526653 PAX2Q02962 417 aa4.41□□□□□ -1.7
SF3B2-205ENST00000526653 BNIP2Q12982 314 aa4.41□□□□□ -1.7
SF3B2-205ENST00000526653 FHL1Q13642 323 aa4.41□□□□□ -1.7
SF3B2-205ENST00000526653 ZMYND11Q15326 602 aa4.41□□□□□ -1.7
SF3B2-205ENST00000526653 MAPK14Q16539 360 aa4.41□□□□□ -1.7
SF3B2-205ENST00000526653 MOGQ16653 247 aa4.41□□□□□ -1.7
SF3B2-205ENST00000526653 ARHGAP11BQ3KRB8 267 aa4.41□□□□□ -1.7
SF3B2-205ENST00000526653 RUNDC3AQ59EK9 446 aa4.41□□□□□ -1.7
SF3B2-205ENST00000526653 PHYHD1Q5SRE7 291 aa4.41□□□□□ -1.7
SF3B2-205ENST00000526653 CARD17Q5XLA6 110 aa4.41□□□□□ -1.7
SF3B2-205ENST00000526653 AWAT2Q6E213 333 aa4.41□□□□□ -1.7
SF3B2-205ENST00000526653 CLEC6AQ6EIG7 209 aa4.41□□□□□ -1.7
SF3B2-205ENST00000526653 DHRS7BQ6IAN0 325 aaPredicted RBP4.41□□□□□ -1.7
SF3B2-205ENST00000526653 GDPGP1Q6ZNW5 385 aa4.41□□□□□ -1.7
SF3B2-205ENST00000526653 C1orf122Q6ZSJ8 110 aa4.41□□□□□ -1.7
SF3B2-205ENST00000526653 TMEM139Q8IV31 216 aa4.41□□□□□ -1.7
SF3B2-205ENST00000526653 PDZD9Q8IXQ8 264 aa4.41□□□□□ -1.7
SF3B2-205ENST00000526653 PRR18Q8N4B5 295 aa4.41□□□□□ -1.7
SF3B2-205ENST00000526653 PAQR4Q8N4S7 273 aaPredicted RBP4.41□□□□□ -1.7
SF3B2-205ENST00000526653 SPICQ8N5J4 248 aa4.41□□□□□ -1.7
SF3B2-205ENST00000526653 OR4S1Q8NGB4 309 aa4.41□□□□□ -1.7
SF3B2-205ENST00000526653 FGFBP3Q8TAT2 258 aa4.41□□□□□ -1.7
SF3B2-205ENST00000526653 MUC7Q8TAX7 377 aa4.41□□□□□ -1.7
SF3B2-205ENST00000526653 ZNF519Q8TB69 540 aa4.41□□□□□ -1.7
SF3B2-205ENST00000526653 GEMIN6Q8WXD5 167 aaKnown RBP4.41□□□□□ -1.7
SF3B2-205ENST00000526653 PPCDCQ96CD2 204 aa4.41□□□□□ -1.7
SF3B2-205ENST00000526653 SLC25A36Q96CQ1 311 aa4.41□□□□□ -1.7
SF3B2-205ENST00000526653 FAM120BQ96EK7 910 aaKnown RBP4.41□□□□□ -1.7
SF3B2-205ENST00000526653 KCNA7Q96RP8 456 aa4.41□□□□□ -1.7
SF3B2-205ENST00000526653 STACQ99469 402 aa4.41□□□□□ -1.7
SF3B2-205ENST00000526653 ASCL2Q99929 193 aa4.41□□□□□ -1.7
SF3B2-205ENST00000526653 RHOXF2Q9BQY4 288 aa4.41□□□□□ -1.7
SF3B2-205ENST00000526653 TAPBPLQ9BX59 468 aa4.41□□□□□ -1.7
SF3B2-205ENST00000526653 EGLN1Q9GZT9 426 aa4.41□□□□□ -1.7
SF3B2-205ENST00000526653 DENND2DQ9H6A0 471 aaPredicted RBP4.41□□□□□ -1.7
SF3B2-205ENST00000526653 IL20RAQ9UHF4 553 aa4.41□□□□□ -1.7
SF3B2-205ENST00000526653 BAIAP2L1Q9UHR4 511 aa4.41□□□□□ -1.7
SF3B2-205ENST00000526653 PCDHGB4Q9UN71 923 aa4.41□□□□□ -1.7
SF3B2-205ENST00000526653 FAF1Q9UNN5 650 aaPredicted RBP4.41□□□□□ -1.7
SF3B2-205ENST00000526653 RCE1Q9Y256 329 aa4.41□□□□□ -1.7
SF3B2-205ENST00000526653 DOCK11Q5JSL3 2073 aa4.41□□□□□ -1.7
SF3B2-205ENST00000526653 SACSQ9NZJ4 4579 aa4.4□□□□□ -1.7
SF3B2-205ENST00000526653 IGLV3-9A0A075B6K5 115 aa4.4□□□□□ -1.71
SF3B2-205ENST00000526653 IGHV2-70DA0A0C4DH43 119 aa4.4□□□□□ -1.71
SF3B2-205ENST00000526653 A0A0U1RQK1 487 aa4.4□□□□□ -1.71
SF3B2-205ENST00000526653 CENPVL3A0A0U1RRI6 287 aa4.4□□□□□ -1.71
SF3B2-205ENST00000526653 PLSCR5A0PG75 271 aa4.4□□□□□ -1.71
SF3B2-205ENST00000526653 RBMY1BA6NDE4 496 aaKnown RBP4.4□□□□□ -1.71
SF3B2-205ENST00000526653 RBMY1EA6NEQ0 496 aaKnown RBP4.4□□□□□ -1.71
SF3B2-205ENST00000526653 CLDN24A6NM45 220 aa4.4□□□□□ -1.71
SF3B2-205ENST00000526653 ZNF99A8MXY4 864 aaPredicted RBP4.4□□□□□ -1.71
SF3B2-205ENST00000526653 AP3D1O14617 1153 aa4.4□□□□□ -1.71
SF3B2-205ENST00000526653 TNFRSF13BO14836 293 aaPredicted RBP4.4□□□□□ -1.71
SF3B2-205ENST00000526653 ZNF208O43345 1280 aa4.4□□□□□ -1.71
SF3B2-205ENST00000526653 SEC22BO75396 215 aa4.4□□□□□ -1.71
SF3B2-205ENST00000526653 RAB36O95755 333 aa4.4□□□□□ -1.71
SF3B2-205ENST00000526653 SERPINA5P05154 406 aa4.4□□□□□ -1.71
SF3B2-205ENST00000526653 RBP1P09455 135 aa4.4□□□□□ -1.71
SF3B2-205ENST00000526653 IFI6P09912 130 aa4.4□□□□□ -1.71
SF3B2-205ENST00000526653 NPSP0C0P6 89 aa4.4□□□□□ -1.71
SF3B2-205ENST00000526653 RBMY1DP0C7P1 496 aaKnown RBP4.4□□□□□ -1.71
SF3B2-205ENST00000526653 LYL1P12980 280 aa4.4□□□□□ -1.71
SF3B2-205ENST00000526653 UQCRC2P22695 453 aa4.4□□□□□ -1.71
SF3B2-205ENST00000526653 CXCR1P25024 350 aa4.4□□□□□ -1.71
SF3B2-205ENST00000526653 PPIFP30405 207 aaKnown RBP4.4□□□□□ -1.71
SF3B2-205ENST00000526653 HOXD3P31249 432 aaPredicted RBP4.4□□□□□ -1.71
SF3B2-205ENST00000526653 RPL4P36578 427 aaKnown RBP4.4□□□□□ -1.71
SF3B2-205ENST00000526653 TGFBR2P37173 567 aa4.4□□□□□ -1.71
SF3B2-205ENST00000526653 HTR3AP46098 478 aa4.4□□□□□ -1.71
SF3B2-205ENST00000526653 GSTM5P46439 218 aa4.4□□□□□ -1.71
SF3B2-205ENST00000526653 P2RY4P51582 365 aa4.4□□□□□ -1.71
SF3B2-205ENST00000526653 POLR2HP52434 150 aaKnown RBP4.4□□□□□ -1.71
SF3B2-205ENST00000526653 UCP2P55851 309 aa4.4□□□□□ -1.71
SF3B2-205ENST00000526653 BPIFB3P59826 476 aa4.4□□□□□ -1.71
SF3B2-205ENST00000526653 RBBP4Q09028 425 aa4.4□□□□□ -1.71
SF3B2-205ENST00000526653 CAMK2DQ13557 499 aa4.4□□□□□ -1.71
SF3B2-205ENST00000526653 C1DQ13901 141 aaKnown RBP4.4□□□□□ -1.71
SF3B2-205ENST00000526653 ZNF141Q15928 474 aa4.4□□□□□ -1.71
SF3B2-205ENST00000526653 IMPG1Q17R60 797 aa4.4□□□□□ -1.71
SF3B2-205ENST00000526653 SPATA46Q5T0L3 261 aa4.4□□□□□ -1.71
SF3B2-205ENST00000526653 THEM4Q5T1C6 240 aa4.4□□□□□ -1.71
SF3B2-205ENST00000526653 EMBQ6PCB8 327 aa4.4□□□□□ -1.71
SF3B2-205ENST00000526653 ZNF813Q6ZN06 617 aa4.4□□□□□ -1.71
SF3B2-205ENST00000526653 FRRS1Q6ZNA5 592 aa4.4□□□□□ -1.71
SF3B2-205ENST00000526653 GPRIN3Q6ZVF9 776 aa4.4□□□□□ -1.71
SF3B2-205ENST00000526653 RNF144BQ7Z419 303 aa4.4□□□□□ -1.71
SF3B2-205ENST00000526653 SKA3Q8IX90 412 aa4.4□□□□□ -1.71
SF3B2-205ENST00000526653 KLHL7Q8IXQ5 586 aa4.4□□□□□ -1.71
SF3B2-205ENST00000526653 DDIASQ8IXT1 998 aa4.4□□□□□ -1.71
SF3B2-205ENST00000526653 MUC20Q8N307 709 aaPredicted RBP4.4□□□□□ -1.71
SF3B2-205ENST00000526653 ARFGAP2Q8N6H7 521 aa4.4□□□□□ -1.71
SF3B2-205ENST00000526653 WFDC9Q8NEX5 89 aa4.4□□□□□ -1.71
SF3B2-205ENST00000526653 OR5D16Q8NGK9 328 aa4.4□□□□□ -1.71
SF3B2-205ENST00000526653 CLHC1Q8NHS4 586 aa4.4□□□□□ -1.71
SF3B2-205ENST00000526653 RP9Q8TA86 221 aaKnown RBP4.4□□□□□ -1.71
SF3B2-205ENST00000526653 CNOT9Q92600 299 aaKnown RBP4.4□□□□□ -1.71
SF3B2-205ENST00000526653 RITA1Q96K30 269 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms