RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 TMEFF2Q9UIK5 374 aaPredicted RBP11.27□□□□□ -0.61
SMPD1-202ENST00000526280 KLHL21Q9UJP4 597 aa11.27□□□□□ -0.61
SMPD1-202ENST00000526280 B9D1Q9UPM9 204 aa11.27□□□□□ -0.61
SMPD1-202ENST00000526280 HRNRQ86YZ3 2850 aaPredicted RBP11.27□□□□□ -0.61
SMPD1-202ENST00000526280 TEX15Q9BXT5 2789 aa11.27□□□□□ -0.61
SMPD1-202ENST00000526280 TACC2O95359 2948 aa11.26□□□□□ -0.61
SMPD1-202ENST00000526280 IGLV1-36A0A0B4J1U3 117 aa11.26□□□□□ -0.61
SMPD1-202ENST00000526280 IGHV1-18A0A0C4DH31 117 aa11.26□□□□□ -0.61
SMPD1-202ENST00000526280 A0A1W2PPL8 197 aa11.26□□□□□ -0.61
SMPD1-202ENST00000526280 UBL3O95164 117 aa11.26□□□□□ -0.61
SMPD1-202ENST00000526280 SCG5P05408 212 aa11.26□□□□□ -0.61
SMPD1-202ENST00000526280 CD3EP07766 207 aa11.26□□□□□ -0.61
SMPD1-202ENST00000526280 PATE4P0C8F1 98 aa11.26□□□□□ -0.61
SMPD1-202ENST00000526280 PTAFRP25105 342 aa11.26□□□□□ -0.61
SMPD1-202ENST00000526280 LAP3P28838 519 aa11.26□□□□□ -0.61
SMPD1-202ENST00000526280 ARR3P36575 388 aa11.26□□□□□ -0.61
SMPD1-202ENST00000526280 RAB1AP62820 205 aa11.26□□□□□ -0.61
SMPD1-202ENST00000526280 PIGFQ07326 219 aa11.26□□□□□ -0.61
SMPD1-202ENST00000526280 GSG1Q2KHT4 349 aa11.26□□□□□ -0.61
SMPD1-202ENST00000526280 DNM1P34Q6PK57 102 aa11.26□□□□□ -0.61
SMPD1-202ENST00000526280 UGT2A3Q6UWM9 527 aa11.26□□□□□ -0.61
SMPD1-202ENST00000526280 SLC16A14Q7RTX9 510 aa11.26□□□□□ -0.61
SMPD1-202ENST00000526280 DPPA2Q7Z7J5 298 aa11.26□□□□□ -0.61
SMPD1-202ENST00000526280 MDP1Q86V88 176 aa11.26□□□□□ -0.61
SMPD1-202ENST00000526280 CDC20BQ86Y33 519 aa11.26□□□□□ -0.61
SMPD1-202ENST00000526280 GLB1L2Q8IW92 636 aa11.26□□□□□ -0.61
SMPD1-202ENST00000526280 LRRC18Q8N456 261 aa11.26□□□□□ -0.61
SMPD1-202ENST00000526280 CYB561A3Q8NBI2 242 aa11.26□□□□□ -0.61
SMPD1-202ENST00000526280 SLC37A3Q8NCC5 494 aa11.26□□□□□ -0.61
SMPD1-202ENST00000526280 ZNF75AQ96N20 296 aa11.26□□□□□ -0.61
SMPD1-202ENST00000526280 SLC38A2Q96QD8 506 aa11.26□□□□□ -0.61
SMPD1-202ENST00000526280 CIB1Q99828 191 aa11.26□□□□□ -0.61
SMPD1-202ENST00000526280 RERGLQ9H628 205 aa11.26□□□□□ -0.61
SMPD1-202ENST00000526280 PLEKHF2Q9H8W4 249 aa11.26□□□□□ -0.61
SMPD1-202ENST00000526280 NOX3Q9HBY0 568 aa11.26□□□□□ -0.61
SMPD1-202ENST00000526280 SLC25A19Q9HC21 320 aa11.26□□□□□ -0.61
SMPD1-202ENST00000526280 SRA1Q9HD15 236 aaKnown RBP11.26□□□□□ -0.61
SMPD1-202ENST00000526280 RPRD1BQ9NQG5 326 aaKnown RBP11.26□□□□□ -0.61
SMPD1-202ENST00000526280 POLE4Q9NR33 117 aa11.26□□□□□ -0.61
SMPD1-202ENST00000526280 CMC2Q9NRP2 79 aa11.26□□□□□ -0.61
SMPD1-202ENST00000526280 COA3Q9Y2R0 106 aaPredicted RBP11.26□□□□□ -0.61
SMPD1-202ENST00000526280 FKBP7Q9Y680 259 aa11.26□□□□□ -0.61
SMPD1-202ENST00000526280 SPG11Q96JI7 2443 aa11.26□□□□□ -0.61
SMPD1-202ENST00000526280 AKAP6Q13023 2319 aa11.25□□□□□ -0.61
SMPD1-202ENST00000526280 RIIAD1A6NNX1 92 aa11.25□□□□□ -0.61
SMPD1-202ENST00000526280 ABCD4O14678 606 aa11.25□□□□□ -0.61
SMPD1-202ENST00000526280 PLAUP00749 431 aa11.25□□□□□ -0.61
SMPD1-202ENST00000526280 IFNGP01579 166 aa11.25□□□□□ -0.61
SMPD1-202ENST00000526280 HMGN1P05114 100 aa11.25□□□□□ -0.61
SMPD1-202ENST00000526280 CST2P09228 141 aa11.25□□□□□ -0.61
SMPD1-202ENST00000526280 MMP7P09237 267 aaPredicted RBP11.25□□□□□ -0.61
SMPD1-202ENST00000526280 MSR1P21757 451 aa11.25□□□□□ -0.61
SMPD1-202ENST00000526280 IGFBP5P24593 272 aa11.25□□□□□ -0.61
SMPD1-202ENST00000526280 CHN2P52757 468 aa11.25□□□□□ -0.61
SMPD1-202ENST00000526280 DBPQ10586 325 aaPredicted RBP11.25□□□□□ -0.61
SMPD1-202ENST00000526280 DAG1Q14118 895 aa11.25□□□□□ -0.61
SMPD1-202ENST00000526280 CRMP1Q14194 572 aa11.25□□□□□ -0.61
SMPD1-202ENST00000526280 PTGES3Q15185 160 aaKnown RBP11.25□□□□□ -0.61
SMPD1-202ENST00000526280 SLC36A2Q495M3 483 aa11.25□□□□□ -0.61
SMPD1-202ENST00000526280 C6orf52Q5T4I8 152 aa11.25□□□□□ -0.61
SMPD1-202ENST00000526280 TMEM236Q5W0B7 351 aa11.25□□□□□ -0.61
SMPD1-202ENST00000526280 FOXN4Q96NZ1 517 aa11.25□□□□□ -0.61
SMPD1-202ENST00000526280 MYCBPQ99417 103 aaPredicted RBP11.25□□□□□ -0.61
SMPD1-202ENST00000526280 SLC29A1Q99808 456 aa11.25□□□□□ -0.61
SMPD1-202ENST00000526280 NMNAT2Q9BZQ4 307 aa11.25□□□□□ -0.61
SMPD1-202ENST00000526280 RACGAP1Q9H0H5 632 aa11.25□□□□□ -0.61
SMPD1-202ENST00000526280 FN3KQ9H479 309 aa11.25□□□□□ -0.61
SMPD1-202ENST00000526280 USE1Q9NZ43 259 aa11.25□□□□□ -0.61
SMPD1-202ENST00000526280 ENOPH1Q9UHY7 261 aa11.25□□□□□ -0.61
SMPD1-202ENST00000526280 RNF115Q9Y4L5 304 aa11.25□□□□□ -0.61
SMPD1-202ENST00000526280 EI24O14681 340 aa11.24□□□□□ -0.61
SMPD1-202ENST00000526280 SURF4O15260 269 aa11.24□□□□□ -0.61
SMPD1-202ENST00000526280 MPZL1O95297 269 aa11.24□□□□□ -0.61
SMPD1-202ENST00000526280 ALPLP05186 524 aa11.24□□□□□ -0.61
SMPD1-202ENST00000526280 CELA3BP08861 270 aa11.24□□□□□ -0.61
SMPD1-202ENST00000526280 CECR9P0C854 216 aa11.24□□□□□ -0.61
SMPD1-202ENST00000526280 ZNF14P17017 642 aaPredicted RBP11.24□□□□□ -0.61
SMPD1-202ENST00000526280 ZNF3P17036 446 aa11.24□□□□□ -0.61
SMPD1-202ENST00000526280 EPHA2P29317 976 aa11.24□□□□□ -0.61
SMPD1-202ENST00000526280 IDH3GP51553 393 aaPredicted RBP11.24□□□□□ -0.61
SMPD1-202ENST00000526280 SLC25A1P53007 311 aa11.24□□□□□ -0.61
SMPD1-202ENST00000526280 GLO1Q04760 184 aa11.24□□□□□ -0.61
SMPD1-202ENST00000526280 NPRL3Q12980 569 aa11.24□□□□□ -0.61
SMPD1-202ENST00000526280 ENDOGQ14249 297 aaKnown RBP11.24□□□□□ -0.61
SMPD1-202ENST00000526280 KCNMB1Q16558 191 aa11.24□□□□□ -0.61
SMPD1-202ENST00000526280 TMEM53Q6P2H8 277 aa11.24□□□□□ -0.61
SMPD1-202ENST00000526280 ZNF704Q6ZNC4 412 aaPredicted RBP11.24□□□□□ -0.61
SMPD1-202ENST00000526280 ZBTB49Q6ZSB9 765 aa11.24□□□□□ -0.61
SMPD1-202ENST00000526280 SYT9Q86SS6 491 aa11.24□□□□□ -0.61
SMPD1-202ENST00000526280 MYPOPQ86VE0 399 aaPredicted RBP11.24□□□□□ -0.61
SMPD1-202ENST00000526280 CBR4Q8N4T8 237 aa11.24□□□□□ -0.61
SMPD1-202ENST00000526280 PACRGLQ8N7B6 248 aa11.24□□□□□ -0.61
SMPD1-202ENST00000526280 OR2T4Q8NH00 348 aa11.24□□□□□ -0.61
SMPD1-202ENST00000526280 LILRB1Q8NHL6 650 aaPredicted RBP11.24□□□□□ -0.61
SMPD1-202ENST00000526280 FBXO17Q96EF6 278 aa11.24□□□□□ -0.61
SMPD1-202ENST00000526280 RADILQ96JH8 1075 aa11.24□□□□□ -0.61
SMPD1-202ENST00000526280 C9orf16Q9BUW7 83 aa11.24□□□□□ -0.61
SMPD1-202ENST00000526280 ZNF416Q9BWM5 594 aa11.24□□□□□ -0.61
SMPD1-202ENST00000526280 TEX12Q9BXU0 123 aa11.24□□□□□ -0.61
SMPD1-202ENST00000526280 KCNN2Q9H2S1 579 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms