RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 OR5AS1Q8N127 324 aa9.73□□□□□ -0.85
SDCBP-211ENST00000523441 BBS10Q8TAM1 723 aa9.73□□□□□ -0.85
SDCBP-211ENST00000523441 RAB40AQ8WXH6 277 aa9.73□□□□□ -0.85
SDCBP-211ENST00000523441 MCHR2Q969V1 340 aa9.73□□□□□ -0.85
SDCBP-211ENST00000523441 SLC25A44Q96H78 314 aaPredicted RBP9.73□□□□□ -0.85
SDCBP-211ENST00000523441 WFDC6Q9BQY6 131 aa9.73□□□□□ -0.85
SDCBP-211ENST00000523441 NUDT16L1Q9BRJ7 211 aaKnown RBP9.73□□□□□ -0.85
SDCBP-211ENST00000523441 POFUT1Q9H488 388 aa9.73□□□□□ -0.85
SDCBP-211ENST00000523441 MEAF6Q9HAF1 191 aa9.73□□□□□ -0.85
SDCBP-211ENST00000523441 AIG1Q9NVV5 245 aa9.73□□□□□ -0.85
SDCBP-211ENST00000523441 MKS1Q9NXB0 559 aa9.73□□□□□ -0.85
SDCBP-211ENST00000523441 SLC13A4Q9UKG4 626 aa9.73□□□□□ -0.85
SDCBP-211ENST00000523441 ANGPT4Q9Y264 503 aa9.73□□□□□ -0.85
SDCBP-211ENST00000523441 LRCH1Q9Y2L9 728 aa9.73□□□□□ -0.85
SDCBP-211ENST00000523441 POLR3KQ9Y2Y1 108 aaPredicted RBP9.73□□□□□ -0.85
SDCBP-211ENST00000523441 RYR3Q15413 4870 aa9.72□□□□□ -0.85
SDCBP-211ENST00000523441 BLOC1S5-TXNDC5H3BN57 136 aa9.72□□□□□ -0.85
SDCBP-211ENST00000523441 PLXNB1O43157 2135 aa9.72□□□□□ -0.85
SDCBP-211ENST00000523441 GPR137BO60478 399 aa9.72□□□□□ -0.85
SDCBP-211ENST00000523441 IGHV4-59P01825 116 aa9.72□□□□□ -0.85
SDCBP-211ENST00000523441 IGHG1P01857 330 aa9.72□□□□□ -0.85
SDCBP-211ENST00000523441 SFTPBP07988 381 aa9.72□□□□□ -0.85
SDCBP-211ENST00000523441 MMP7P09237 267 aaPredicted RBP9.72□□□□□ -0.85
SDCBP-211ENST00000523441 WNT2P09544 360 aa9.72□□□□□ -0.85
SDCBP-211ENST00000523441 TNFRSF1AP19438 455 aa9.72□□□□□ -0.85
SDCBP-211ENST00000523441 SLC1A6P48664 564 aa9.72□□□□□ -0.85
SDCBP-211ENST00000523441 FMODQ06828 376 aa9.72□□□□□ -0.85
SDCBP-211ENST00000523441 PSG7Q13046 419 aa9.72□□□□□ -0.85
SDCBP-211ENST00000523441 ZMAT1Q5H9K5 638 aa9.72□□□□□ -0.85
SDCBP-211ENST00000523441 FAM201AQ5SY85 155 aa9.72□□□□□ -0.85
SDCBP-211ENST00000523441 MBNL2Q5VZF2 373 aaKnown RBP9.72□□□□□ -0.85
SDCBP-211ENST00000523441 SLC27A4Q6P1M0 643 aa9.72□□□□□ -0.85
SDCBP-211ENST00000523441 C1orf94Q6P1W5 598 aa9.72□□□□□ -0.85
SDCBP-211ENST00000523441 RANBP3LQ86VV4 465 aaPredicted RBP9.72□□□□□ -0.85
SDCBP-211ENST00000523441 KLBQ86Z14 1044 aa9.72□□□□□ -0.85
SDCBP-211ENST00000523441 LSMEM1Q8N8F7 131 aa9.72□□□□□ -0.85
SDCBP-211ENST00000523441 C11orf44Q8N8P7 122 aa9.72□□□□□ -0.85
SDCBP-211ENST00000523441 C19orf18Q8NEA5 215 aa9.72□□□□□ -0.85
SDCBP-211ENST00000523441 POM121L2Q96KW2 1035 aa9.72□□□□□ -0.85
SDCBP-211ENST00000523441 ZIM3Q96PE6 472 aa9.72□□□□□ -0.85
SDCBP-211ENST00000523441 OR2V2Q96R30 315 aa9.72□□□□□ -0.85
SDCBP-211ENST00000523441 SIGLEC11Q96RL6 698 aa9.72□□□□□ -0.85
SDCBP-211ENST00000523441 RASSF4Q9H2L5 321 aa9.72□□□□□ -0.85
SDCBP-211ENST00000523441 WDR55Q9H6Y2 383 aaPredicted RBP9.72□□□□□ -0.85
SDCBP-211ENST00000523441 TAS2R5Q9NYW4 299 aa9.72□□□□□ -0.85
SDCBP-211ENST00000523441 IL20RAQ9UHF4 553 aa9.72□□□□□ -0.85
SDCBP-211ENST00000523441 PRDM4Q9UKN5 801 aa9.72□□□□□ -0.85
SDCBP-211ENST00000523441 RAP2CQ9Y3L5 183 aa9.72□□□□□ -0.85
SDCBP-211ENST00000523441 A0A0B4J2E0 115 aa9.71□□□□□ -0.86
SDCBP-211ENST00000523441 A0A1B0GX12 115 aa9.71□□□□□ -0.86
SDCBP-211ENST00000523441 CPSF4LA6NMK7 179 aaKnown RBP9.71□□□□□ -0.86
SDCBP-211ENST00000523441 HIST1H2ABP04908 130 aa9.71□□□□□ -0.86
SDCBP-211ENST00000523441 F13BP05160 661 aa9.71□□□□□ -0.86
SDCBP-211ENST00000523441 CD55P08174 381 aa9.71□□□□□ -0.86
SDCBP-211ENST00000523441 EPHA3P29320 983 aa9.71□□□□□ -0.86
SDCBP-211ENST00000523441 LIPAP38571 399 aa9.71□□□□□ -0.86
SDCBP-211ENST00000523441 ARHGDIAP52565 204 aa9.71□□□□□ -0.86
SDCBP-211ENST00000523441 PSG4Q00888 419 aa9.71□□□□□ -0.86
SDCBP-211ENST00000523441 IFFO1Q0D2I5 559 aa9.71□□□□□ -0.86
SDCBP-211ENST00000523441 CDK5R2Q13319 367 aa9.71□□□□□ -0.86
SDCBP-211ENST00000523441 RGNQ15493 299 aa9.71□□□□□ -0.86
SDCBP-211ENST00000523441 FAM91A1Q658Y4 838 aa9.71□□□□□ -0.86
SDCBP-211ENST00000523441 Q6ZR03 302 aa9.71□□□□□ -0.86
SDCBP-211ENST00000523441 HIST3H2AQ7L7L0 130 aa9.71□□□□□ -0.86
SDCBP-211ENST00000523441 DPPA2Q7Z7J5 298 aa9.71□□□□□ -0.86
SDCBP-211ENST00000523441 MUC20Q8N307 709 aaPredicted RBP9.71□□□□□ -0.86
SDCBP-211ENST00000523441 ZNF283Q8N7M2 679 aa9.71□□□□□ -0.86
SDCBP-211ENST00000523441 ATG16L2Q8NAA4 619 aa9.71□□□□□ -0.86
SDCBP-211ENST00000523441 NOXO1Q8NFA2 376 aa9.71□□□□□ -0.86
SDCBP-211ENST00000523441 OR10AD1Q8NGE0 317 aa9.71□□□□□ -0.86
SDCBP-211ENST00000523441 HIST1H2ACQ93077 130 aa9.71□□□□□ -0.86
SDCBP-211ENST00000523441 THOC1Q96FV9 657 aaKnown RBP9.71□□□□□ -0.86
SDCBP-211ENST00000523441 CDADC1Q9BWV3 514 aa9.71□□□□□ -0.86
SDCBP-211ENST00000523441 PPCSQ9HAB8 311 aa9.71□□□□□ -0.86
SDCBP-211ENST00000523441 NANSQ9NR45 359 aa9.71□□□□□ -0.86
SDCBP-211ENST00000523441 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.71□□□□□ -0.86
SDCBP-211ENST00000523441 TMEM178BH3BS89 294 aa9.7□□□□□ -0.86
SDCBP-211ENST00000523441 M0R3H8 397 aa9.7□□□□□ -0.86
SDCBP-211ENST00000523441 MGRN1O60291 552 aa9.7□□□□□ -0.86
SDCBP-211ENST00000523441 TPST2O60704 377 aa9.7□□□□□ -0.86
SDCBP-211ENST00000523441 SLC22A3O75751 556 aa9.7□□□□□ -0.86
SDCBP-211ENST00000523441 MT-ATP6P00846 226 aa9.7□□□□□ -0.86
SDCBP-211ENST00000523441 SERPINE1P05121 402 aa9.7□□□□□ -0.86
SDCBP-211ENST00000523441 KITP10721 976 aa9.7□□□□□ -0.86
SDCBP-211ENST00000523441 BGNP21810 368 aa9.7□□□□□ -0.86
SDCBP-211ENST00000523441 PRKAR1BP31321 381 aa9.7□□□□□ -0.86
SDCBP-211ENST00000523441 PITPNBP48739 271 aa9.7□□□□□ -0.86
SDCBP-211ENST00000523441 ERFP50548 548 aa9.7□□□□□ -0.86
SDCBP-211ENST00000523441 MMP16P51512 607 aa9.7□□□□□ -0.86
SDCBP-211ENST00000523441 PROK1P58294 105 aa9.7□□□□□ -0.86
SDCBP-211ENST00000523441 PAX2Q02962 417 aa9.7□□□□□ -0.86
SDCBP-211ENST00000523441 EGR3Q06889 387 aa9.7□□□□□ -0.86
SDCBP-211ENST00000523441 CD47Q08722 323 aa9.7□□□□□ -0.86
SDCBP-211ENST00000523441 ZNF774Q6NX45 483 aa9.7□□□□□ -0.86
SDCBP-211ENST00000523441 UNQ6126/PRO20091Q6UXV3 157 aa9.7□□□□□ -0.86
SDCBP-211ENST00000523441 NANOGNBQ7Z5D8 188 aa9.7□□□□□ -0.86
SDCBP-211ENST00000523441 SMYD1Q8NB12 490 aa9.7□□□□□ -0.86
SDCBP-211ENST00000523441 SCCPDHQ8NBX0 429 aa9.7□□□□□ -0.86
SDCBP-211ENST00000523441 OR8B3Q8NGG8 313 aa9.7□□□□□ -0.86
SDCBP-211ENST00000523441 OR6S1Q8NH40 331 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms