RNA–Protein interactions for RNA: ENST00000523298.5

CTNNA1-238, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-238ENST00000523298 SMYD3Q9H7B4 428 aa3.45□□□□□ -1.86
CTNNA1-238ENST00000523298 WDR54Q9H977 334 aa3.45□□□□□ -1.86
CTNNA1-238ENST00000523298 ELOVL3Q9HB03 270 aa3.45□□□□□ -1.86
CTNNA1-238ENST00000523298 ELL3Q9HB65 397 aaPredicted RBP3.45□□□□□ -1.86
CTNNA1-238ENST00000523298 AMBNQ9NP70 447 aa3.45□□□□□ -1.86
CTNNA1-238ENST00000523298 DYRK4Q9NR20 520 aa3.45□□□□□ -1.86
CTNNA1-238ENST00000523298 UFSP2Q9NUQ7 469 aa3.45□□□□□ -1.86
CTNNA1-238ENST00000523298 TAS2R9Q9NYW1 312 aa3.45□□□□□ -1.86
CTNNA1-238ENST00000523298 CD274Q9NZQ7 290 aa3.45□□□□□ -1.86
CTNNA1-238ENST00000523298 NYAP2Q9P242 653 aa3.45□□□□□ -1.86
CTNNA1-238ENST00000523298 PITPNC1Q9UKF7 332 aa3.45□□□□□ -1.86
CTNNA1-238ENST00000523298 ERVW-1Q9UQF0 538 aa3.45□□□□□ -1.86
CTNNA1-238ENST00000523298 GMPPBQ9Y5P6 360 aa3.45□□□□□ -1.86
CTNNA1-238ENST00000523298 WIF1Q9Y5W5 379 aa3.45□□□□□ -1.86
CTNNA1-238ENST00000523298 KPTNQ9Y664 436 aa3.45□□□□□ -1.86
CTNNA1-238ENST00000523298 AKAP12Q02952 1782 aa3.45□□□□□ -1.86
CTNNA1-238ENST00000523298 RGPD5Q99666 1765 aa3.45□□□□□ -1.86
CTNNA1-238ENST00000523298 PCDH11XQ9BZA7 1347 aa3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 PPIP5K1Q6PFW1 1433 aa3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 ZNF646O15015 1829 aaPredicted RBP3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 MAP2P11137 1827 aaKnown RBP3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 AK9Q5TCS8 1911 aa3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 NKTRP30414 1462 aaKnown RBP3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 RALGAPBQ86X10 1494 aa3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 MSH6P52701 1360 aa3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 TMEM213A2RRL7 107 aa3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 ZNF233A6NK53 670 aa3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 RAB29O14966 203 aa3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 BET1O15155 118 aa3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 NBR2O15453 112 aa3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 OR1F1O43749 312 aa3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 NOS1APO75052 506 aaPredicted RBP3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 SUPT3HO75486 399 aa3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 ADAP1O75689 374 aa3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 B3GAT3O94766 335 aa3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 NDUFA7O95182 113 aa3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 DEXIO95424 95 aa3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 TSPAN12O95859 305 aa3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 SERPIND1P05546 499 aa3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 DBTP11182 482 aaKnown RBP3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 NR2C1P13056 603 aa3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 XRCC1P18887 633 aaPredicted RBP3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 HLA-DMAP28067 261 aa3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 PPP2R1BP30154 601 aa3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 UGT1A3P35503 534 aa3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 UGT1A5P35504 534 aa3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 MAGEA2P43356 314 aa3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 OR1D4P47884 311 aa3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 HTR5AP47898 357 aa3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 PSMD4P55036 377 aaKnown RBP3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 ERVPABLB-1P60509 514 aa3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 MRPS6P82932 125 aaKnown RBP3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 PJVKQ0ZLH3 352 aa3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 CRMP1Q14194 572 aa3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 TRAM2Q15035 370 aa3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 TGIF1Q15583 401 aa3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 ZNF239Q16600 458 aaKnown RBP3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 IMPG1Q17R60 797 aa3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 C15orf32Q32M92 178 aa3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 C6orf226Q5I0X4 101 aa3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 SPINK14Q6IE38 97 aa3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 LEG1Q6P5S2 330 aa3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 ZNF530Q6P9A1 599 aaPredicted RBP3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 STOX1Q6ZVD7 989 aa3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 LHFPL3Q86UP9 236 aa3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 RANBP3LQ86VV4 465 aaPredicted RBP3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 OR1L4Q8NGR5 311 aa3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 OR6X1Q8NH79 312 aa3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 RAET1EQ8TD07 263 aa3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 U2AF1L4Q8WU68 220 aaKnown RBP3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 ANKRD36BP1Q96IX9 119 aa3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 PRRT1Q99946 306 aa3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 P2RY13Q9BPV8 354 aa3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 MAPKAP1Q9BPZ7 522 aa3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 ZNF251Q9BRH9 671 aa3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 SLC30A2Q9BRI3 323 aa3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 WRAP53Q9BUR4 548 aaKnown RBP3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 SRRQ9GZT4 340 aa3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 SLITRK2Q9H156 845 aa3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 ZSCAN16Q9H4T2 348 aaPredicted RBP3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 ASB7Q9H672 318 aa3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 NARFLQ9H6Q4 476 aa3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 GPN2Q9H9Y4 310 aaPredicted RBP3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 PARVAQ9NVD7 372 aa3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 SMOXQ9NWM0 555 aa3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 BCAP29Q9UHQ4 241 aa3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 ANAPC7Q9UJX3 599 aa3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 CLEC4EQ9ULY5 219 aa3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 PRG3Q9Y2Y8 225 aaPredicted RBP3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 DHRS7Q9Y394 339 aa3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 MMACHCQ9Y4U1 282 aa3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 MMP24Q9Y5R2 645 aa3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 FKBP7Q9Y680 259 aa3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 TAF1LQ8IZX4 1826 aa3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 KIF20BQ96Q89 1820 aa3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 MARF1Q9Y4F3 1742 aaKnown RBP3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 NHSL1Q5SYE7 1610 aa3.44□□□□□ -1.86
CTNNA1-238ENST00000523298 TOPAZ1Q8N9V7 1692 aa3.43□□□□□ -1.86
CTNNA1-238ENST00000523298 TRBV11-1A0A0K0K1C0 115 aa3.43□□□□□ -1.86
CTNNA1-238ENST00000523298 A0A1B0GVL5 298 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms