RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 APBB3O95704 486 aa11.63□□□□□ -0.55
TRAPPC9-208ENST00000520857 NFYBP25208 207 aa11.63□□□□□ -0.55
TRAPPC9-208ENST00000520857 TM4SF4P48230 202 aa11.63□□□□□ -0.55
TRAPPC9-208ENST00000520857 PEA15Q15121 130 aa11.63□□□□□ -0.55
TRAPPC9-208ENST00000520857 PLEKHN1Q494U1 663 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC9-208ENST00000520857 JMJD6Q6NYC1 403 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC9-208ENST00000520857 PAPD4Q6PIY7 484 aaKnown RBP11.63□□□□□ -0.55
TRAPPC9-208ENST00000520857 OR4K17Q8NGC6 315 aa11.63□□□□□ -0.55
TRAPPC9-208ENST00000520857 SLC41A2Q96JW4 573 aa11.63□□□□□ -0.55
TRAPPC9-208ENST00000520857 SULT1C2O00338 296 aa11.62□□□□□ -0.55
TRAPPC9-208ENST00000520857 CRYBA1P05813 215 aa11.62□□□□□ -0.55
TRAPPC9-208ENST00000520857 ITGB8P26012 769 aa11.62□□□□□ -0.55
TRAPPC9-208ENST00000520857 DRD3P35462 400 aa11.62□□□□□ -0.55
TRAPPC9-208ENST00000520857 SNRPEP62304 92 aaKnown RBP11.62□□□□□ -0.55
TRAPPC9-208ENST00000520857 PPP1R1AQ13522 171 aa11.62□□□□□ -0.55
TRAPPC9-208ENST00000520857 SLC9A3R2Q15599 337 aa11.62□□□□□ -0.55
TRAPPC9-208ENST00000520857 CSRP2Q16527 193 aa11.62□□□□□ -0.55
TRAPPC9-208ENST00000520857 ZNF101Q8IZC7 436 aa11.62□□□□□ -0.55
TRAPPC9-208ENST00000520857 EIF4E3Q8N5X7 224 aaKnown RBP11.62□□□□□ -0.55
TRAPPC9-208ENST00000520857 CLEC1AQ8NC01 280 aa11.62□□□□□ -0.55
TRAPPC9-208ENST00000520857 OR13C3Q8NGS6 347 aa11.62□□□□□ -0.55
TRAPPC9-208ENST00000520857 NUDCD2Q8WVJ2 157 aa11.62□□□□□ -0.55
TRAPPC9-208ENST00000520857 HDAC8Q9BY41 377 aa11.62□□□□□ -0.55
TRAPPC9-208ENST00000520857 TLNRD1Q9H1K6 362 aa11.62□□□□□ -0.55
TRAPPC9-208ENST00000520857 A0A0A6YYC8 382 aaPredicted RBP11.62□□□□□ -0.55
TRAPPC9-208ENST00000520857 I3L1I5 382 aaPredicted RBP11.62□□□□□ -0.55
TRAPPC9-208ENST00000520857 HRKO00198 91 aa11.62□□□□□ -0.55
TRAPPC9-208ENST00000520857 SLC16A7O60669 478 aa11.62□□□□□ -0.55
TRAPPC9-208ENST00000520857 LILRB3O75022 631 aa11.62□□□□□ -0.55
TRAPPC9-208ENST00000520857 FBXO24O75426 580 aa11.62□□□□□ -0.55
TRAPPC9-208ENST00000520857 S1PR1P21453 382 aa11.62□□□□□ -0.55
TRAPPC9-208ENST00000520857 RPS21P63220 83 aaKnown RBP11.62□□□□□ -0.55
TRAPPC9-208ENST00000520857 KRBOX4Q5JUW0 171 aa11.62□□□□□ -0.55
TRAPPC9-208ENST00000520857 MOB3CQ70IA8 216 aa11.62□□□□□ -0.55
TRAPPC9-208ENST00000520857 TRAPPC6BQ86SZ2 158 aa11.62□□□□□ -0.55
TRAPPC9-208ENST00000520857 PATE1Q8WXA2 126 aa11.62□□□□□ -0.55
TRAPPC9-208ENST00000520857 FAM3CQ92520 227 aa11.62□□□□□ -0.55
TRAPPC9-208ENST00000520857 CMBLQ96DG6 245 aa11.62□□□□□ -0.55
TRAPPC9-208ENST00000520857 DCBLD2Q96PD2 775 aa11.62□□□□□ -0.55
TRAPPC9-208ENST00000520857 DGAT2Q96PD7 388 aa11.62□□□□□ -0.55
TRAPPC9-208ENST00000520857 MFRPQ9BY79 579 aa11.62□□□□□ -0.55
TRAPPC9-208ENST00000520857 CST11Q9H112 138 aa11.62□□□□□ -0.55
TRAPPC9-208ENST00000520857 ZMAT5Q9UDW3 170 aaKnown RBP11.62□□□□□ -0.55
TRAPPC9-208ENST00000520857 MTCL1Q9Y4B5 1905 aaKnown RBP11.62□□□□□ -0.55
TRAPPC9-208ENST00000520857 A0A087WUJ7 227 aa11.62□□□□□ -0.55
TRAPPC9-208ENST00000520857 SERINC4A6NH21 518 aa11.62□□□□□ -0.55
TRAPPC9-208ENST00000520857 OR6C76A6NM76 312 aa11.62□□□□□ -0.55
TRAPPC9-208ENST00000520857 MPTX1A8MV57 137 aa11.62□□□□□ -0.55
TRAPPC9-208ENST00000520857 H0Y8X5 98 aa11.62□□□□□ -0.55
TRAPPC9-208ENST00000520857 M0R036 132 aa11.62□□□□□ -0.55
TRAPPC9-208ENST00000520857 ARPC3O15145 178 aa11.62□□□□□ -0.55
TRAPPC9-208ENST00000520857 UPK3AO75631 287 aa11.62□□□□□ -0.55
TRAPPC9-208ENST00000520857 STK17BO94768 372 aa11.62□□□□□ -0.55
TRAPPC9-208ENST00000520857 NPBWR1P48145 328 aa11.62□□□□□ -0.55
TRAPPC9-208ENST00000520857 PRICKLE4Q2TBC4 344 aa11.62□□□□□ -0.55
TRAPPC9-208ENST00000520857 DGAT2L6Q6ZPD8 337 aa11.62□□□□□ -0.55
TRAPPC9-208ENST00000520857 MARCH3Q86UD3 253 aa11.62□□□□□ -0.55
TRAPPC9-208ENST00000520857 RSPRY1Q96DX4 576 aa11.62□□□□□ -0.55
TRAPPC9-208ENST00000520857 SEH1LQ96EE3 360 aa11.62□□□□□ -0.55
TRAPPC9-208ENST00000520857 ZFP57Q9NU63 452 aa11.62□□□□□ -0.55
TRAPPC9-208ENST00000520857 ICAM5Q9UMF0 924 aa11.62□□□□□ -0.55
TRAPPC9-208ENST00000520857 TNFSF18Q9UNG2 199 aa11.62□□□□□ -0.55
TRAPPC9-208ENST00000520857 C1orf196B1AJZ1 125 aa11.61□□□□□ -0.55
TRAPPC9-208ENST00000520857 SLC17A2O00624 439 aa11.61□□□□□ -0.55
TRAPPC9-208ENST00000520857 ERCC1P07992 297 aaPredicted RBP11.61□□□□□ -0.55
TRAPPC9-208ENST00000520857 ZNF14P17017 642 aaPredicted RBP11.61□□□□□ -0.55
TRAPPC9-208ENST00000520857 NME2P22392 152 aa11.61□□□□□ -0.55
TRAPPC9-208ENST00000520857 CXCR1P25024 350 aa11.61□□□□□ -0.55
TRAPPC9-208ENST00000520857 GGTLC2Q14390 218 aa11.61□□□□□ -0.55
TRAPPC9-208ENST00000520857 ELOCQ15369 112 aa11.61□□□□□ -0.55
TRAPPC9-208ENST00000520857 AGBL4Q5VU57 503 aa11.61□□□□□ -0.55
TRAPPC9-208ENST00000520857 PRR22Q8IZ63 422 aa11.61□□□□□ -0.55
TRAPPC9-208ENST00000520857 MRPL43Q8N983 215 aaKnown RBP11.61□□□□□ -0.55
TRAPPC9-208ENST00000520857 RNF141Q8WVD5 230 aa11.61□□□□□ -0.55
TRAPPC9-208ENST00000520857 OR2A5Q96R48 311 aa11.61□□□□□ -0.55
TRAPPC9-208ENST00000520857 PRRT1Q99946 306 aa11.61□□□□□ -0.55
TRAPPC9-208ENST00000520857 G6PC3Q9BUM1 346 aa11.61□□□□□ -0.55
TRAPPC9-208ENST00000520857 PARP12Q9H0J9 701 aaKnown RBP11.61□□□□□ -0.55
TRAPPC9-208ENST00000520857 SFXN1Q9H9B4 322 aa11.61□□□□□ -0.55
TRAPPC9-208ENST00000520857 ZNF304Q9HCX3 659 aa11.61□□□□□ -0.55
TRAPPC9-208ENST00000520857 ATXN7L1Q9ULK2 861 aaPredicted RBP11.61□□□□□ -0.55
TRAPPC9-208ENST00000520857 MRPS33Q9Y291 106 aaKnown RBP11.61□□□□□ -0.55
TRAPPC9-208ENST00000520857 PLXNA2O75051 1894 aa11.61□□□□□ -0.55
TRAPPC9-208ENST00000520857 POM121BA6NF01 834 aa11.61□□□□□ -0.55
TRAPPC9-208ENST00000520857 IGKV1D-16P01601 117 aa11.61□□□□□ -0.55
TRAPPC9-208ENST00000520857 SERPINA5P05154 406 aa11.61□□□□□ -0.55
TRAPPC9-208ENST00000520857 SFTPBP07988 381 aa11.61□□□□□ -0.55
TRAPPC9-208ENST00000520857 PI3P19957 117 aa11.61□□□□□ -0.55
TRAPPC9-208ENST00000520857 RIDAP52758 137 aaKnown RBP11.61□□□□□ -0.55
TRAPPC9-208ENST00000520857 PSG6Q00889 435 aa11.61□□□□□ -0.55
TRAPPC9-208ENST00000520857 RPL18Q07020 188 aaKnown RBP11.61□□□□□ -0.55
TRAPPC9-208ENST00000520857 NR0B2Q15466 257 aa11.61□□□□□ -0.55
TRAPPC9-208ENST00000520857 CEBPEQ15744 281 aa11.61□□□□□ -0.55
TRAPPC9-208ENST00000520857 LY6G6FQ5SQ64 297 aa11.61□□□□□ -0.55
TRAPPC9-208ENST00000520857 BAP18Q8IXM2 172 aa11.61□□□□□ -0.55
TRAPPC9-208ENST00000520857 GVQW1Q8N7I0 195 aa11.61□□□□□ -0.55
TRAPPC9-208ENST00000520857 SFT2D1Q8WV19 159 aa11.61□□□□□ -0.55
TRAPPC9-208ENST00000520857 AMELYQ99218 206 aa11.61□□□□□ -0.55
TRAPPC9-208ENST00000520857 RPS10P5Q9NQ39 176 aa11.61□□□□□ -0.55
TRAPPC9-208ENST00000520857 A0A087WV62 115 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms