RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 RALGAPA1Q6GYQ0 2036 aa2.96□□□□□ -1.94
SQLE-204ENST00000520493 AQRO60306 1485 aaKnown RBP eCLIP2.96□□□□□ -1.94
SQLE-204ENST00000520493 UBN2Q6ZU65 1347 aa2.95□□□□□ -1.94
SQLE-204ENST00000520493 A0A0B4J2A0 478 aa2.95□□□□□ -1.94
SQLE-204ENST00000520493 A0A1W2PRF3 423 aa2.95□□□□□ -1.94
SQLE-204ENST00000520493 A0A1W2PRM7 423 aa2.95□□□□□ -1.94
SQLE-204ENST00000520493 FAM168BA1KXE4 195 aa2.95□□□□□ -1.94
SQLE-204ENST00000520493 TSPAN11A1L157 253 aa2.95□□□□□ -1.94
SQLE-204ENST00000520493 PRSS37A4D1T9 235 aa2.95□□□□□ -1.94
SQLE-204ENST00000520493 SLC22A20A6NK97 555 aa2.95□□□□□ -1.94
SQLE-204ENST00000520493 E7EWF7 191 aa2.95□□□□□ -1.94
SQLE-204ENST00000520493 AQP8O94778 261 aa2.95□□□□□ -1.94
SQLE-204ENST00000520493 YEATS4O95619 227 aa2.95□□□□□ -1.94
SQLE-204ENST00000520493 HBE1P02100 147 aa2.95□□□□□ -1.94
SQLE-204ENST00000520493 ACSM4P0C7M7 580 aa2.95□□□□□ -1.94
SQLE-204ENST00000520493 GABRR2P28476 465 aa2.95□□□□□ -1.94
SQLE-204ENST00000520493 OR1E1P30953 314 aa2.95□□□□□ -1.94
SQLE-204ENST00000520493 NBL1P41271 181 aa2.95□□□□□ -1.94
SQLE-204ENST00000520493 KCNJ3P48549 501 aa2.95□□□□□ -1.94
SQLE-204ENST00000520493 RPS15AP62244 130 aaKnown RBP2.95□□□□□ -1.94
SQLE-204ENST00000520493 SP4Q02446 784 aa2.95□□□□□ -1.94
SQLE-204ENST00000520493 PDIA2Q13087 525 aaKnown RBP2.95□□□□□ -1.94
SQLE-204ENST00000520493 SYCP1Q15431 976 aa2.95□□□□□ -1.94
SQLE-204ENST00000520493 PSMD5Q16401 504 aa2.95□□□□□ -1.94
SQLE-204ENST00000520493 C18orf21Q32NC0 220 aaPredicted RBP2.95□□□□□ -1.94
SQLE-204ENST00000520493 TPRG1LQ5T0D9 272 aa2.95□□□□□ -1.94
SQLE-204ENST00000520493 SPECC1LQ69YQ0 1117 aa2.95□□□□□ -1.94
SQLE-204ENST00000520493 TMEM150AQ86TG1 271 aa2.95□□□□□ -1.94
SQLE-204ENST00000520493 SPATA24Q86W54 205 aa2.95□□□□□ -1.94
SQLE-204ENST00000520493 RBM45Q8IUH3 476 aaKnown RBP2.95□□□□□ -1.94
SQLE-204ENST00000520493 TMEM252Q8N6L7 170 aa2.95□□□□□ -1.94
SQLE-204ENST00000520493 FAM86B1Q8N7N1 296 aa2.95□□□□□ -1.94
SQLE-204ENST00000520493 OR2AP1Q8NGE2 309 aa2.95□□□□□ -1.94
SQLE-204ENST00000520493 OR5B3Q8NH48 314 aa2.95□□□□□ -1.94
SQLE-204ENST00000520493 ITFG1Q8TB96 612 aa2.95□□□□□ -1.94
SQLE-204ENST00000520493 ISOC2Q96AB3 205 aa2.95□□□□□ -1.94
SQLE-204ENST00000520493 ECHDC3Q96DC8 303 aa2.95□□□□□ -1.94
SQLE-204ENST00000520493 NRBF2Q96F24 287 aa2.95□□□□□ -1.94
SQLE-204ENST00000520493 DNAJC1Q96KC8 554 aaKnown RBP2.95□□□□□ -1.94
SQLE-204ENST00000520493 RAB1BQ9H0U4 201 aa2.95□□□□□ -1.94
SQLE-204ENST00000520493 OR52A5Q9H2C5 316 aa2.95□□□□□ -1.94
SQLE-204ENST00000520493 KIR3DX1Q9H7L2 352 aa2.95□□□□□ -1.94
SQLE-204ENST00000520493 PATZ1Q9HBE1 687 aaKnown RBP2.95□□□□□ -1.94
SQLE-204ENST00000520493 SH2D2AQ9NP31 389 aa2.95□□□□□ -1.94
SQLE-204ENST00000520493 TREM1Q9NP99 234 aa2.95□□□□□ -1.94
SQLE-204ENST00000520493 ZNF302Q9NR11 478 aa2.95□□□□□ -1.94
SQLE-204ENST00000520493 ZNF275Q9NSD4 429 aaPredicted RBP2.95□□□□□ -1.94
SQLE-204ENST00000520493 QPCTLQ9NXS2 382 aa2.95□□□□□ -1.94
SQLE-204ENST00000520493 ADA2Q9NZK5 511 aa2.95□□□□□ -1.94
SQLE-204ENST00000520493 XCL2Q9UBD3 114 aa2.95□□□□□ -1.94
SQLE-204ENST00000520493 Q9UF83 564 aa2.95□□□□□ -1.94
SQLE-204ENST00000520493 SHPKQ9UHJ6 478 aa2.95□□□□□ -1.94
SQLE-204ENST00000520493 DDX19BQ9UMR2 479 aa2.95□□□□□ -1.94
SQLE-204ENST00000520493 ZNF256Q9Y2P7 627 aaPredicted RBP2.95□□□□□ -1.94
SQLE-204ENST00000520493 KPTNQ9Y664 436 aa2.95□□□□□ -1.94
SQLE-204ENST00000520493 MSH6P52701 1360 aa2.95□□□□□ -1.94
SQLE-204ENST00000520493 CROCCQ5TZA2 2017 aa2.94□□□□□ -1.94
SQLE-204ENST00000520493 TRAV39A0A0B4J263 110 aa2.94□□□□□ -1.94
SQLE-204ENST00000520493 ERICH2A1L162 156 aa2.94□□□□□ -1.94
SQLE-204ENST00000520493 RBMY1BA6NDE4 496 aaKnown RBP2.94□□□□□ -1.94
SQLE-204ENST00000520493 RBMY1EA6NEQ0 496 aaKnown RBP2.94□□□□□ -1.94
SQLE-204ENST00000520493 ZNF726A6NNF4 738 aa2.94□□□□□ -1.94
SQLE-204ENST00000520493 GMDSO60547 372 aa2.94□□□□□ -1.94
SQLE-204ENST00000520493 ZNF780AO75290 641 aaPredicted RBP2.94□□□□□ -1.94
SQLE-204ENST00000520493 VAPBO95292 243 aa2.94□□□□□ -1.94
SQLE-204ENST00000520493 LSM8O95777 96 aaKnown RBP2.94□□□□□ -1.94
SQLE-204ENST00000520493 KLK1P06870 262 aa2.94□□□□□ -1.94
SQLE-204ENST00000520493 KRT16P08779 473 aa2.94□□□□□ -1.94
SQLE-204ENST00000520493 GIG44P09565 113 aaPredicted RBP2.94□□□□□ -1.94
SQLE-204ENST00000520493 RBMY1DP0C7P1 496 aaKnown RBP2.94□□□□□ -1.94
SQLE-204ENST00000520493 RBMY1A1P0DJD3 496 aaKnown RBP2.94□□□□□ -1.94
SQLE-204ENST00000520493 ZNF250P15622 560 aa2.94□□□□□ -1.94
SQLE-204ENST00000520493 PSMB1P20618 241 aaKnown RBP2.94□□□□□ -1.94
SQLE-204ENST00000520493 CCR8P51685 355 aa2.94□□□□□ -1.94
SQLE-204ENST00000520493 MAP3K7CLP57077 242 aa2.94□□□□□ -1.94
SQLE-204ENST00000520493 UBE2MP61081 183 aaKnown RBP2.94□□□□□ -1.94
SQLE-204ENST00000520493 ACTA2P62736 377 aa2.94□□□□□ -1.94
SQLE-204ENST00000520493 ACTG2P63267 376 aa2.94□□□□□ -1.94
SQLE-204ENST00000520493 ACTC1P68032 377 aa2.94□□□□□ -1.94
SQLE-204ENST00000520493 ACTA1P68133 377 aa2.94□□□□□ -1.94
SQLE-204ENST00000520493 ZNF45Q02386 682 aa2.94□□□□□ -1.94
SQLE-204ENST00000520493 ACVR1Q04771 509 aa2.94□□□□□ -1.94
SQLE-204ENST00000520493 XRCC4Q13426 336 aa2.94□□□□□ -1.94
SQLE-204ENST00000520493 NRF1Q16656 503 aa2.94□□□□□ -1.94
SQLE-204ENST00000520493 TRMT5Q32P41 509 aaKnown RBP2.94□□□□□ -1.94
SQLE-204ENST00000520493 PDPK2PQ6A1A2 396 aa2.94□□□□□ -1.94
SQLE-204ENST00000520493 CLEC6AQ6EIG7 209 aa2.94□□□□□ -1.94
SQLE-204ENST00000520493 PRMT9Q6P2P2 845 aa2.94□□□□□ -1.94
SQLE-204ENST00000520493 ERICH5Q6P6B1 374 aa2.94□□□□□ -1.94
SQLE-204ENST00000520493 MBOAT1Q6ZNC8 495 aa2.94□□□□□ -1.94
SQLE-204ENST00000520493 LINC00336Q6ZUF6 198 aa2.94□□□□□ -1.94
SQLE-204ENST00000520493 COPS6Q7L5N1 327 aa2.94□□□□□ -1.94
SQLE-204ENST00000520493 PID1Q7Z2X4 250 aa2.94□□□□□ -1.94
SQLE-204ENST00000520493 OR2W3Q7Z3T1 314 aa2.94□□□□□ -1.94
SQLE-204ENST00000520493 FAM220AQ7Z4H9 259 aa2.94□□□□□ -1.94
SQLE-204ENST00000520493 ZNF589Q86UQ0 364 aaPredicted RBP2.94□□□□□ -1.94
SQLE-204ENST00000520493 ZBED8Q8IZ13 594 aa2.94□□□□□ -1.94
SQLE-204ENST00000520493 TRAM1L1Q8N609 369 aa2.94□□□□□ -1.94
SQLE-204ENST00000520493 HSD17B11Q8NBQ5 300 aa2.94□□□□□ -1.94
SQLE-204ENST00000520493 OR2A1Q8NGT9 310 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms