RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 OR10G8Q8NGN5 311 aa3.28□□□□□ -1.88
RNU4-60P-201ENST00000517239 OR2T11Q8NH01 316 aa3.28□□□□□ -1.88
RNU4-60P-201ENST00000517239 C16orf52Q8NHV5 167 aa3.28□□□□□ -1.88
RNU4-60P-201ENST00000517239 ZNF564Q8TBZ8 553 aaPredicted RBP3.28□□□□□ -1.88
RNU4-60P-201ENST00000517239 MAPK15Q8TD08 544 aa3.28□□□□□ -1.88
RNU4-60P-201ENST00000517239 BLOC1S5Q8TDH9 187 aa3.28□□□□□ -1.88
RNU4-60P-201ENST00000517239 OR5P2Q8WZ92 322 aa3.28□□□□□ -1.88
RNU4-60P-201ENST00000517239 RORBQ92753 470 aa3.28□□□□□ -1.88
RNU4-60P-201ENST00000517239 SGTBQ96EQ0 304 aa3.28□□□□□ -1.88
RNU4-60P-201ENST00000517239 WBP1Q96G27 269 aa3.28□□□□□ -1.88
RNU4-60P-201ENST00000517239 ADTRPQ96IZ2 230 aa3.28□□□□□ -1.88
RNU4-60P-201ENST00000517239 PACRGQ96M98 296 aaPredicted RBP3.28□□□□□ -1.88
RNU4-60P-201ENST00000517239 RARRES2Q99969 163 aa3.28□□□□□ -1.88
RNU4-60P-201ENST00000517239 CALN1Q9BXU9 219 aa3.28□□□□□ -1.88
RNU4-60P-201ENST00000517239 PITPNM3Q9BZ71 974 aa3.28□□□□□ -1.88
RNU4-60P-201ENST00000517239 TSGA10Q9BZW7 698 aa3.28□□□□□ -1.88
RNU4-60P-201ENST00000517239 WDR13Q9H1Z4 485 aa3.28□□□□□ -1.88
RNU4-60P-201ENST00000517239 IL25Q9H293 177 aa3.28□□□□□ -1.88
RNU4-60P-201ENST00000517239 SP140LQ9H930 580 aa3.28□□□□□ -1.88
RNU4-60P-201ENST00000517239 SIAEQ9HAT2 523 aa3.28□□□□□ -1.88
RNU4-60P-201ENST00000517239 MED4Q9NPJ6 270 aa3.28□□□□□ -1.88
RNU4-60P-201ENST00000517239 TIGARQ9NQ88 270 aa3.28□□□□□ -1.88
RNU4-60P-201ENST00000517239 ADARB2Q9NS39 739 aaKnown RBP3.28□□□□□ -1.88
RNU4-60P-201ENST00000517239 FGFR1OP2Q9NVK5 253 aa3.28□□□□□ -1.88
RNU4-60P-201ENST00000517239 GIN1Q9NXP7 522 aa3.28□□□□□ -1.88
RNU4-60P-201ENST00000517239 MUTYHQ9UIF7 546 aa3.28□□□□□ -1.88
RNU4-60P-201ENST00000517239 TFR2Q9UP52 801 aa3.28□□□□□ -1.88
RNU4-60P-201ENST00000517239 PPP1R3CQ9UQK1 317 aa3.28□□□□□ -1.88
RNU4-60P-201ENST00000517239 SNX24Q9Y343 169 aa3.28□□□□□ -1.88
RNU4-60P-201ENST00000517239 GREB1LQ9C091 1923 aaPredicted RBP3.28□□□□□ -1.88
RNU4-60P-201ENST00000517239 ADAMTSL3P82987 1691 aa3.27□□□□□ -1.89
RNU4-60P-201ENST00000517239 A0A1B0GU03 582 aa3.27□□□□□ -1.89
RNU4-60P-201ENST00000517239 A0A1W2PQL4 384 aaPredicted RBP3.27□□□□□ -1.89
RNU4-60P-201ENST00000517239 SRRM3A6NNA2 597 aaPredicted RBP3.27□□□□□ -1.89
RNU4-60P-201ENST00000517239 FTCDNL1E5RQL4 147 aa3.27□□□□□ -1.89
RNU4-60P-201ENST00000517239 E9PLD3 99 aa3.27□□□□□ -1.89
RNU4-60P-201ENST00000517239 SMKR1H3BMG3 65 aa3.27□□□□□ -1.89
RNU4-60P-201ENST00000517239 J3QLI3 93 aa3.27□□□□□ -1.89
RNU4-60P-201ENST00000517239 M0R036 132 aa3.27□□□□□ -1.89
RNU4-60P-201ENST00000517239 NME4O00746 187 aa3.27□□□□□ -1.89
RNU4-60P-201ENST00000517239 MAGEB4O15481 346 aaPredicted RBP3.27□□□□□ -1.89
RNU4-60P-201ENST00000517239 ZNF749O43361 778 aa3.27□□□□□ -1.89
RNU4-60P-201ENST00000517239 FKBP6O75344 327 aa3.27□□□□□ -1.89
RNU4-60P-201ENST00000517239 TRMUO75648 421 aaKnown RBP3.27□□□□□ -1.89
RNU4-60P-201ENST00000517239 RAB36O95755 333 aa3.27□□□□□ -1.89
RNU4-60P-201ENST00000517239 TACSTD2P09758 323 aa3.27□□□□□ -1.89
RNU4-60P-201ENST00000517239 RBMY1CP0DJD4 496 aa3.27□□□□□ -1.89
RNU4-60P-201ENST00000517239 CAPN2P17655 700 aa3.27□□□□□ -1.89
RNU4-60P-201ENST00000517239 TCP1P17987 556 aaKnown RBP3.27□□□□□ -1.89
RNU4-60P-201ENST00000517239 ATP6V1B2P21281 511 aa3.27□□□□□ -1.89
RNU4-60P-201ENST00000517239 GTF2H1P32780 548 aa3.27□□□□□ -1.89
RNU4-60P-201ENST00000517239 KIR3DL2P43630 455 aa3.27□□□□□ -1.89
RNU4-60P-201ENST00000517239 CAPZBP47756 277 aa3.27□□□□□ -1.89
RNU4-60P-201ENST00000517239 PAX9P55771 341 aa3.27□□□□□ -1.89
RNU4-60P-201ENST00000517239 BIDP55957 195 aa3.27□□□□□ -1.89
RNU4-60P-201ENST00000517239 MRPS11P82912 194 aaKnown RBP3.27□□□□□ -1.89
RNU4-60P-201ENST00000517239 ILF3Q12906 894 aaKnown RBP eCLIP3.27□□□□□ -1.89
RNU4-60P-201ENST00000517239 SLC39A6Q13433 755 aa3.27□□□□□ -1.89
RNU4-60P-201ENST00000517239 ABRAXAS2Q15018 415 aa3.27□□□□□ -1.89
RNU4-60P-201ENST00000517239 TRIP6Q15654 476 aaKnown RBP3.27□□□□□ -1.89
RNU4-60P-201ENST00000517239 C2CD6Q53TS8 623 aa3.27□□□□□ -1.89
RNU4-60P-201ENST00000517239 PDZD11Q5EBL8 140 aa3.27□□□□□ -1.89
RNU4-60P-201ENST00000517239 GCSAMLQ5JQS6 135 aa3.27□□□□□ -1.89
RNU4-60P-201ENST00000517239 OR10J3Q5JRS4 329 aa3.27□□□□□ -1.89
RNU4-60P-201ENST00000517239 TIMM23BQ5SRD1 257 aa3.27□□□□□ -1.89
RNU4-60P-201ENST00000517239 RESP18Q5W5W9 173 aa3.27□□□□□ -1.89
RNU4-60P-201ENST00000517239 ZNF788Q6ZQV5 615 aa3.27□□□□□ -1.89
RNU4-60P-201ENST00000517239 Q6ZSR9 355 aa3.27□□□□□ -1.89
RNU4-60P-201ENST00000517239 FBXO16Q8IX29 292 aaPredicted RBP3.27□□□□□ -1.89
RNU4-60P-201ENST00000517239 ZNF740Q8NDX6 193 aa3.27□□□□□ -1.89
RNU4-60P-201ENST00000517239 OR52B6Q8NGF0 335 aa3.27□□□□□ -1.89
RNU4-60P-201ENST00000517239 TEX47Q8TBZ9 253 aa3.27□□□□□ -1.89
RNU4-60P-201ENST00000517239 ADAMTS16Q8TE57 1224 aa3.27□□□□□ -1.89
RNU4-60P-201ENST00000517239 CREB3L1Q96BA8 519 aa3.27□□□□□ -1.89
RNU4-60P-201ENST00000517239 PAGE5Q96GU1 130 aa3.27□□□□□ -1.89
RNU4-60P-201ENST00000517239 TMEM80Q96HE8 168 aa3.27□□□□□ -1.89
RNU4-60P-201ENST00000517239 ZNF354BQ96LW1 612 aa3.27□□□□□ -1.89
RNU4-60P-201ENST00000517239 ATF6BQ99941 703 aa3.27□□□□□ -1.89
RNU4-60P-201ENST00000517239 MRPS26Q9BYN8 205 aaKnown RBP3.27□□□□□ -1.89
RNU4-60P-201ENST00000517239 CHIAQ9BZP6 476 aa3.27□□□□□ -1.89
RNU4-60P-201ENST00000517239 NMUR2Q9GZQ4 415 aa3.27□□□□□ -1.89
RNU4-60P-201ENST00000517239 HOXD1Q9GZZ0 328 aa3.27□□□□□ -1.89
RNU4-60P-201ENST00000517239 DSN1Q9H410 356 aa3.27□□□□□ -1.89
RNU4-60P-201ENST00000517239 RNF167Q9H6Y7 350 aa3.27□□□□□ -1.89
RNU4-60P-201ENST00000517239 SIX2Q9NPC8 291 aa3.27□□□□□ -1.89
RNU4-60P-201ENST00000517239 B3GNT2Q9NY97 397 aa3.27□□□□□ -1.89
RNU4-60P-201ENST00000517239 RIMS3Q9UJD0 308 aa3.27□□□□□ -1.89
RNU4-60P-201ENST00000517239 GUCA1BQ9UMX6 200 aa3.27□□□□□ -1.89
RNU4-60P-201ENST00000517239 SAMD4AQ9UPU9 718 aaKnown RBP3.27□□□□□ -1.89
RNU4-60P-201ENST00000517239 STYXL1Q9Y6J8 313 aa3.27□□□□□ -1.89
RNU4-60P-201ENST00000517239 V9GYQ6 96 aa3.27□□□□□ -1.89
RNU4-60P-201ENST00000517239 CACNA1FO60840 1977 aa3.27□□□□□ -1.89
RNU4-60P-201ENST00000517239 FHAD1B1AJZ9 1412 aa3.27□□□□□ -1.89
RNU4-60P-201ENST00000517239 BRCA1P38398 1863 aaKnown RBP3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 COL22A1Q8NFW1 1626 aaPredicted RBP3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 KIAA0232Q92628 1395 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 NACADO15069 1562 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 LOC100131303A0A0U1RQF7 123 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 ZNF816-ZNF321PA0A0X1KG74 233 aa3.26□□□□□ -1.89
RNU4-60P-201ENST00000517239 A0A1B0GVI7 797 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms