RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 REEP3Q6NUK4 255 aa2.38□□□□□ -2.03
HERC4-215ENST00000515753 TTC23LQ6PF05 361 aa2.38□□□□□ -2.03
HERC4-215ENST00000515753 HSDL2Q6YN16 418 aa2.38□□□□□ -2.03
HERC4-215ENST00000515753 SCARA5Q6ZMJ2 495 aa2.38□□□□□ -2.03
HERC4-215ENST00000515753 Q6ZSR3 168 aa2.38□□□□□ -2.03
HERC4-215ENST00000515753 NIPA1Q7RTP0 329 aa2.38□□□□□ -2.03
HERC4-215ENST00000515753 IQCKQ8N0W5 287 aa2.38□□□□□ -2.03
HERC4-215ENST00000515753 SLC34A3Q8N130 599 aa2.38□□□□□ -2.03
HERC4-215ENST00000515753 C8orf31Q8N9H6 132 aa2.38□□□□□ -2.03
HERC4-215ENST00000515753 MNS1Q8NEH6 495 aa2.38□□□□□ -2.03
HERC4-215ENST00000515753 OR5T3Q8NGG3 340 aa2.38□□□□□ -2.03
HERC4-215ENST00000515753 OR52I1Q8NGK6 324 aa2.38□□□□□ -2.03
HERC4-215ENST00000515753 LKAAEAR1Q8TD35 194 aa2.38□□□□□ -2.03
HERC4-215ENST00000515753 SETD7Q8WTS6 366 aaKnown RBP2.38□□□□□ -2.03
HERC4-215ENST00000515753 KIFAP3Q92845 792 aa2.38□□□□□ -2.03
HERC4-215ENST00000515753 TOP1MTQ969P6 601 aa2.38□□□□□ -2.03
HERC4-215ENST00000515753 XPO6Q96QU8 1125 aaKnown RBP2.38□□□□□ -2.03
HERC4-215ENST00000515753 TMEM175Q9BSA9 504 aa2.38□□□□□ -2.03
HERC4-215ENST00000515753 UPF3BQ9BZI7 483 aaKnown RBP2.38□□□□□ -2.03
HERC4-215ENST00000515753 FBXO44Q9H4M3 255 aa2.38□□□□□ -2.03
HERC4-215ENST00000515753 RANBP3Q9H6Z4 567 aaPredicted RBP2.38□□□□□ -2.03
HERC4-215ENST00000515753 CAB39LQ9H9S4 337 aa2.38□□□□□ -2.03
HERC4-215ENST00000515753 TIGARQ9NQ88 270 aa2.38□□□□□ -2.03
HERC4-215ENST00000515753 PXMP2Q9NR77 195 aa2.38□□□□□ -2.03
HERC4-215ENST00000515753 TUBG2Q9NRH3 451 aa2.38□□□□□ -2.03
HERC4-215ENST00000515753 PAK1IP1Q9NWT1 392 aaPredicted RBP2.38□□□□□ -2.03
HERC4-215ENST00000515753 IMPAD1Q9NX62 359 aa2.38□□□□□ -2.03
HERC4-215ENST00000515753 NYAP2Q9P242 653 aa2.38□□□□□ -2.03
HERC4-215ENST00000515753 SPRR3Q9UBC9 169 aa2.38□□□□□ -2.03
HERC4-215ENST00000515753 RIMS3Q9UJD0 308 aa2.38□□□□□ -2.03
HERC4-215ENST00000515753 TBX21Q9UL17 535 aa2.38□□□□□ -2.03
HERC4-215ENST00000515753 GMEB1Q9Y692 573 aa2.38□□□□□ -2.03
HERC4-215ENST00000515753 SAR1BQ9Y6B6 198 aa2.38□□□□□ -2.03
HERC4-215ENST00000515753 CCDC88AQ3V6T2 1871 aa2.37□□□□□ -2.03
HERC4-215ENST00000515753 GSTTP1A0A1W2PQM5 241 aa2.37□□□□□ -2.03
HERC4-215ENST00000515753 VSTM2BA6NLU5 285 aa2.37□□□□□ -2.03
HERC4-215ENST00000515753 SERPINE3A8MV23 424 aa2.37□□□□□ -2.03
HERC4-215ENST00000515753 ZNF487B1APH4 448 aa2.37□□□□□ -2.03
HERC4-215ENST00000515753 LOC110117498-PIK3R3F6TDL0 507 aa2.37□□□□□ -2.03
HERC4-215ENST00000515753 G3V3Y1 287 aa2.37□□□□□ -2.03
HERC4-215ENST00000515753 RAB29O14966 203 aa2.37□□□□□ -2.03
HERC4-215ENST00000515753 CETN3O15182 167 aa2.37□□□□□ -2.03
HERC4-215ENST00000515753 EIF3HO15372 352 aaKnown RBP eCLIP2.37□□□□□ -2.03
HERC4-215ENST00000515753 SCRG1O75711 98 aa2.37□□□□□ -2.03
HERC4-215ENST00000515753 VENTXO95231 258 aa2.37□□□□□ -2.03
HERC4-215ENST00000515753 TSPAN13O95857 204 aa2.37□□□□□ -2.03
HERC4-215ENST00000515753 DCNP07585 359 aaKnown RBP2.37□□□□□ -2.03
HERC4-215ENST00000515753 ANXA5P08758 320 aa2.37□□□□□ -2.03
HERC4-215ENST00000515753 UBCP0CG48 685 aaKnown RBP2.37□□□□□ -2.03
HERC4-215ENST00000515753 ABOP16442 354 aa2.37□□□□□ -2.03
HERC4-215ENST00000515753 DCKP27707 260 aa2.37□□□□□ -2.03
HERC4-215ENST00000515753 HTR1FP30939 366 aa2.37□□□□□ -2.03
HERC4-215ENST00000515753 MAGEA9P43362 315 aa2.37□□□□□ -2.03
HERC4-215ENST00000515753 RPL29P47914 159 aaKnown RBP2.37□□□□□ -2.03
HERC4-215ENST00000515753 CCNHP51946 323 aaPredicted RBP2.37□□□□□ -2.03
HERC4-215ENST00000515753 LIM2P55344 173 aa2.37□□□□□ -2.03
HERC4-215ENST00000515753 FBXW4P57775 412 aa2.37□□□□□ -2.03
HERC4-215ENST00000515753 IRF8Q02556 426 aa2.37□□□□□ -2.03
HERC4-215ENST00000515753 CYLC2Q14093 348 aaPredicted RBP2.37□□□□□ -2.03
HERC4-215ENST00000515753 SAMD4BQ5PRF9 694 aaKnown RBP2.37□□□□□ -2.03
HERC4-215ENST00000515753 LY6G6FQ5SQ64 297 aa2.37□□□□□ -2.03
HERC4-215ENST00000515753 OR52W1Q6IF63 320 aa2.37□□□□□ -2.03
HERC4-215ENST00000515753 SLC25A25Q6KCM7 469 aa2.37□□□□□ -2.03
HERC4-215ENST00000515753 UFSP1Q6NVU6 142 aa2.37□□□□□ -2.03
HERC4-215ENST00000515753 HDDC2Q7Z4H3 204 aa2.37□□□□□ -2.03
HERC4-215ENST00000515753 APRG1Q8IVJ8 170 aa2.37□□□□□ -2.03
HERC4-215ENST00000515753 C9orf40Q8IXQ3 194 aa2.37□□□□□ -2.03
HERC4-215ENST00000515753 MCOLN2Q8IZK6 566 aa2.37□□□□□ -2.03
HERC4-215ENST00000515753 JAGN1Q8N5M9 183 aa2.37□□□□□ -2.03
HERC4-215ENST00000515753 MS4A15Q8N5U1 240 aa2.37□□□□□ -2.03
HERC4-215ENST00000515753 OR13C9Q8NGT0 318 aa2.37□□□□□ -2.03
HERC4-215ENST00000515753 RHOXF1Q8NHV9 184 aa2.37□□□□□ -2.03
HERC4-215ENST00000515753 ACER1Q8TDN7 264 aa2.37□□□□□ -2.03
HERC4-215ENST00000515753 PYROXD1Q8WU10 500 aa2.37□□□□□ -2.03
HERC4-215ENST00000515753 FRAT1Q92837 279 aaPredicted RBP2.37□□□□□ -2.03
HERC4-215ENST00000515753 ASB9Q96DX5 294 aa2.37□□□□□ -2.03
HERC4-215ENST00000515753 CCDC126Q96EE4 140 aa2.37□□□□□ -2.03
HERC4-215ENST00000515753 CYYR1Q96J86 154 aa2.37□□□□□ -2.03
HERC4-215ENST00000515753 MS4A14Q96JA4 679 aa2.37□□□□□ -2.03
HERC4-215ENST00000515753 OXGR1Q96P68 337 aa2.37□□□□□ -2.03
HERC4-215ENST00000515753 SH3GL1Q99961 368 aa2.37□□□□□ -2.03
HERC4-215ENST00000515753 KCTD14Q9BQ13 255 aaPredicted RBP2.37□□□□□ -2.03
HERC4-215ENST00000515753 ELOVL4Q9GZR5 314 aa2.37□□□□□ -2.03
HERC4-215ENST00000515753 ZBP1Q9H171 429 aa2.37□□□□□ -2.03
HERC4-215ENST00000515753 GAL3ST2Q9H3Q3 398 aa2.37□□□□□ -2.03
HERC4-215ENST00000515753 UGT1A10Q9HAW8 530 aa2.37□□□□□ -2.03
HERC4-215ENST00000515753 NTN4Q9HB63 628 aa2.37□□□□□ -2.03
HERC4-215ENST00000515753 THUMPD1Q9NXG2 353 aaKnown RBP2.37□□□□□ -2.03
HERC4-215ENST00000515753 PTTG3PQ9NZH4 202 aa2.37□□□□□ -2.03
HERC4-215ENST00000515753 PLLPQ9Y342 182 aa2.37□□□□□ -2.03
HERC4-215ENST00000515753 CACNA1SQ13698 1873 aa2.37□□□□□ -2.03
HERC4-215ENST00000515753 A0A1W2PRD5 423 aa2.36□□□□□ -2.03
HERC4-215ENST00000515753 ZNF705EA8MWA4 302 aaPredicted RBP2.36□□□□□ -2.03
HERC4-215ENST00000515753 TEX46H3BTG2 121 aa2.36□□□□□ -2.03
HERC4-215ENST00000515753 GFYI3L273 518 aa2.36□□□□□ -2.03
HERC4-215ENST00000515753 K7ENP7 123 aa2.36□□□□□ -2.03
HERC4-215ENST00000515753 M0R3G1 203 aa2.36□□□□□ -2.03
HERC4-215ENST00000515753 GOSR2O14653 212 aa2.36□□□□□ -2.03
HERC4-215ENST00000515753 KDELR3O43731 214 aa2.36□□□□□ -2.03
HERC4-215ENST00000515753 GPX5O75715 221 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms