RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 A0A0C4DFX4 3053 aa8.76□□□□□ -1.01
VCAN-210ENST00000513960 MPTX1A8MV57 137 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 C2orf74A8MZ97 194 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 J3QRE1 110 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 PRKNO60260 465 aaPredicted RBP8.75□□□□□ -1.01
VCAN-210ENST00000513960 DNAJB6O75190 326 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 PMS2P2O95744 297 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 GPANK1O95872 356 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 SERPINA5P05154 406 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 TPT1P13693 172 aaKnown RBP8.75□□□□□ -1.01
VCAN-210ENST00000513960 TYRP1P17643 537 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 SPI1P17947 270 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 AKT2P31751 481 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 GRK6P43250 576 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 ZNF136P52737 540 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 ACTBP60709 375 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 ACTG1P63261 375 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 RIPPLY1Q0D2K3 151 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 CLINT1Q14677 625 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 TGIF1Q15583 401 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 C11orf87Q6NUJ2 197 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 RNF113BQ8IZP6 322 aaKnown RBP8.75□□□□□ -1.01
VCAN-210ENST00000513960 POMGNT2Q8NAT1 580 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 OR51A4Q8NGJ6 313 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 ZNRF4Q8WWF5 429 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 FOXRED1Q96CU9 486 aaPredicted RBP8.75□□□□□ -1.01
VCAN-210ENST00000513960 LCORQ96JN0 433 aaPredicted RBP8.75□□□□□ -1.01
VCAN-210ENST00000513960 HRASLS2Q9NWW9 162 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 DOCK8Q8NF50 2099 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 C11orf98E9PRG8 122 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 OGG1O15527 345 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 ALOX12BO75342 701 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 ZNF254O75437 659 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 GPR75O95800 540 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 PLGP00747 810 aaPredicted RBP8.75□□□□□ -1.01
VCAN-210ENST00000513960 NID1P14543 1247 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 NQO2P16083 231 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 CD80P33681 288 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 DNASE1L1P49184 302 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 EEF1A1P68104 462 aaKnown RBP8.75□□□□□ -1.01
VCAN-210ENST00000513960 DHODHQ02127 395 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 BIKQ13323 160 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 EIF2S3LQ2VIR3 472 aaKnown RBP8.75□□□□□ -1.01
VCAN-210ENST00000513960 FCRL6Q6DN72 434 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 ADAM5Q6NVV9 412 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 ACOT7LQ6ZUV0 252 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 GALNT16Q8N428 558 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 CD300LFQ8TDQ1 290 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 SMIM3Q9BZL3 60 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 LYRM4Q9HD34 91 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 DUSP22Q9NRW4 184 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 CKLFQ9UBR5 152 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 CHD9Q3L8U1 2897 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 TMEM235A6NFC5 223 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 OR6C65A6NJZ3 312 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 TNFRSF10CO14798 259 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 TNFSF14O43557 240 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 FGF17O60258 216 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 NUDT14O95848 222 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 SMIM10L1P0DMW3 83 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 CTHP32929 405 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 TAS2R19P59542 299 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 RPS11P62280 158 aaKnown RBP eCLIP8.75□□□□□ -1.01
VCAN-210ENST00000513960 SPOCK1Q08629 439 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 FABP9Q0Z7S8 132 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 DHRS2Q13268 280 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 ALKBH1Q13686 389 aaKnown RBP8.75□□□□□ -1.01
VCAN-210ENST00000513960 TMEM31Q5JXX7 168 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 SYS1Q8N2H4 156 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 TEX19Q8NA77 164 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 OR6N1Q8NGY5 312 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 FAM3CQ92520 227 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 ISOC2Q96AB3 205 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 FAM131CQ96AQ9 280 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 FAM3DQ96BQ1 224 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 SMIM10Q96HG1 83 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 GFI1Q99684 422 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 NKX2-4Q9H2Z4 354 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 METTL8Q9H825 291 aaKnown RBP8.75□□□□□ -1.01
VCAN-210ENST00000513960 PLEKHA1Q9HB21 404 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 STEAP1Q9UHE8 339 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 CSAG2Q9Y5P2 127 aa8.75□□□□□ -1.01
VCAN-210ENST00000513960 KLF4O43474 513 aa8.74□□□□□ -1.01
VCAN-210ENST00000513960 OR2T1O43869 369 aa8.74□□□□□ -1.01
VCAN-210ENST00000513960 MED6O75586 246 aa8.74□□□□□ -1.01
VCAN-210ENST00000513960 OR2F2O95006 317 aa8.74□□□□□ -1.01
VCAN-210ENST00000513960 AK1P00568 194 aa8.74□□□□□ -1.01
VCAN-210ENST00000513960 CALCBP10092 127 aa8.74□□□□□ -1.01
VCAN-210ENST00000513960 DAOP14920 347 aa8.74□□□□□ -1.01
VCAN-210ENST00000513960 GNALP38405 381 aa8.74□□□□□ -1.01
VCAN-210ENST00000513960 CASRP41180 1078 aa8.74□□□□□ -1.01
VCAN-210ENST00000513960 CTXN1P60606 82 aa8.74□□□□□ -1.01
VCAN-210ENST00000513960 S100A12P80511 92 aa8.74□□□□□ -1.01
VCAN-210ENST00000513960 OR2F1Q13607 317 aa8.74□□□□□ -1.01
VCAN-210ENST00000513960 ARMC6Q6NXE6 501 aa8.74□□□□□ -1.01
VCAN-210ENST00000513960 PARGQ86W56 976 aa8.74□□□□□ -1.01
VCAN-210ENST00000513960 OR5T3Q8NGG3 340 aa8.74□□□□□ -1.01
VCAN-210ENST00000513960 GLYATL2Q8WU03 294 aa8.74□□□□□ -1.01
VCAN-210ENST00000513960 PATE1Q8WXA2 126 aa8.74□□□□□ -1.01
VCAN-210ENST00000513960 MRGPRX1Q96LB2 322 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms