RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 MAD2L1BPQ15013 274 aaPredicted RBP5.61□□□□□ -1.51
KDM3B-208ENST00000512928 HIST3H3Q16695 136 aa5.61□□□□□ -1.51
KDM3B-208ENST00000512928 NKPD1Q17RQ9 610 aa5.61□□□□□ -1.51
KDM3B-208ENST00000512928 ZBED5Q49AG3 693 aa5.61□□□□□ -1.51
KDM3B-208ENST00000512928 PABPC1L2AQ5JQF8 200 aa5.61□□□□□ -1.51
KDM3B-208ENST00000512928 THEM4Q5T1C6 240 aa5.61□□□□□ -1.51
KDM3B-208ENST00000512928 FAM205BPQ63HN1 556 aa5.61□□□□□ -1.51
KDM3B-208ENST00000512928 RGS7BPQ6MZT1 257 aaPredicted RBP5.61□□□□□ -1.51
KDM3B-208ENST00000512928 CYP2R1Q6VVX0 501 aa5.61□□□□□ -1.51
KDM3B-208ENST00000512928 DPPA2Q7Z7J5 298 aa5.61□□□□□ -1.51
KDM3B-208ENST00000512928 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.61□□□□□ -1.51
KDM3B-208ENST00000512928 ZNF584Q8IVC4 421 aa5.61□□□□□ -1.51
KDM3B-208ENST00000512928 OR1J2Q8NGS2 313 aa5.61□□□□□ -1.51
KDM3B-208ENST00000512928 FANK1Q8TC84 345 aa5.61□□□□□ -1.51
KDM3B-208ENST00000512928 SLC7A13Q8TCU3 470 aa5.61□□□□□ -1.51
KDM3B-208ENST00000512928 C10orf105Q8TEF2 133 aa5.61□□□□□ -1.51
KDM3B-208ENST00000512928 MRPL24Q96A35 216 aaKnown RBP5.61□□□□□ -1.51
KDM3B-208ENST00000512928 PYURFQ96I23 114 aa5.61□□□□□ -1.51
KDM3B-208ENST00000512928 RSRC1Q96IZ7 334 aaKnown RBP5.61□□□□□ -1.51
KDM3B-208ENST00000512928 FOXN4Q96NZ1 517 aa5.61□□□□□ -1.51
KDM3B-208ENST00000512928 ALG12Q9BV10 488 aa5.61□□□□□ -1.51
KDM3B-208ENST00000512928 MRPL13Q9BYD1 178 aaKnown RBP5.61□□□□□ -1.51
KDM3B-208ENST00000512928 MRPL37Q9BZE1 423 aaKnown RBP5.61□□□□□ -1.51
KDM3B-208ENST00000512928 C1orf198Q9H425 327 aa5.61□□□□□ -1.51
KDM3B-208ENST00000512928 ANKRD19PQ9H560 264 aa5.61□□□□□ -1.51
KDM3B-208ENST00000512928 MAGIXQ9H6Y5 334 aa5.61□□□□□ -1.51
KDM3B-208ENST00000512928 SIAEQ9HAT2 523 aa5.61□□□□□ -1.51
KDM3B-208ENST00000512928 SMURF2Q9HAU4 748 aa5.61□□□□□ -1.51
KDM3B-208ENST00000512928 IL1RAPQ9NPH3 570 aa5.61□□□□□ -1.51
KDM3B-208ENST00000512928 NDUFAF4Q9P032 175 aa5.61□□□□□ -1.51
KDM3B-208ENST00000512928 FBXO9Q9UK97 447 aaPredicted RBP5.61□□□□□ -1.51
KDM3B-208ENST00000512928 POMPQ9Y244 141 aa5.61□□□□□ -1.51
KDM3B-208ENST00000512928 CADP27708 2225 aa5.6□□□□□ -1.51
KDM3B-208ENST00000512928 IGKV1D-43A0A0B4J1Z2 117 aa5.6□□□□□ -1.51
KDM3B-208ENST00000512928 LOC390937A0A1W2PQ73 354 aa5.6□□□□□ -1.51
KDM3B-208ENST00000512928 A0A1W2PRQ8 180 aa5.6□□□□□ -1.51
KDM3B-208ENST00000512928 SLC22A23A1A5C7 686 aa5.6□□□□□ -1.51
KDM3B-208ENST00000512928 C5orf49A4QMS7 147 aa5.6□□□□□ -1.51
KDM3B-208ENST00000512928 UNC119BA6NIH7 251 aa5.6□□□□□ -1.51
KDM3B-208ENST00000512928 NPIPB13A6NJU9 1138 aa5.6□□□□□ -1.51
KDM3B-208ENST00000512928 C12orf71A8MTZ7 269 aa5.6□□□□□ -1.51
KDM3B-208ENST00000512928 A8MV72 311 aaPredicted RBP5.6□□□□□ -1.51
KDM3B-208ENST00000512928 NPIPB4C9JG80 1138 aa5.6□□□□□ -1.51
KDM3B-208ENST00000512928 SOCS2O14508 198 aa5.6□□□□□ -1.51
KDM3B-208ENST00000512928 TPD52L2O43399 206 aaKnown RBP5.6□□□□□ -1.51
KDM3B-208ENST00000512928 SYNGR3O43761 229 aa5.6□□□□□ -1.51
KDM3B-208ENST00000512928 CD5LO43866 347 aa5.6□□□□□ -1.51
KDM3B-208ENST00000512928 OR10H3O60404 316 aa5.6□□□□□ -1.51
KDM3B-208ENST00000512928 NDUFB2O95178 105 aa5.6□□□□□ -1.51
KDM3B-208ENST00000512928 PPP1R3DO95685 299 aa5.6□□□□□ -1.51
KDM3B-208ENST00000512928 IGHMP01871 453 aa5.6□□□□□ -1.51
KDM3B-208ENST00000512928 NAT2P11245 290 aa5.6□□□□□ -1.51
KDM3B-208ENST00000512928 ZNF16P17020 682 aaPredicted RBP5.6□□□□□ -1.51
KDM3B-208ENST00000512928 USF1P22415 310 aaPredicted RBP5.6□□□□□ -1.51
KDM3B-208ENST00000512928 STOMP27105 288 aa5.6□□□□□ -1.51
KDM3B-208ENST00000512928 RRM2P31350 389 aa5.6□□□□□ -1.51
KDM3B-208ENST00000512928 GLRXP35754 106 aa5.6□□□□□ -1.51
KDM3B-208ENST00000512928 RAD52P43351 418 aa5.6□□□□□ -1.51
KDM3B-208ENST00000512928 GDI2P50395 445 aaKnown RBP5.6□□□□□ -1.51
KDM3B-208ENST00000512928 KLF3P57682 345 aaPredicted RBP5.6□□□□□ -1.51
KDM3B-208ENST00000512928 SMIM11AP58511 58 aa5.6□□□□□ -1.51
KDM3B-208ENST00000512928 ACTR3P61158 418 aa5.6□□□□□ -1.51
KDM3B-208ENST00000512928 ERVS71-1P61550 626 aa5.6□□□□□ -1.51
KDM3B-208ENST00000512928 MRPS34P82930 218 aaKnown RBP5.6□□□□□ -1.51
KDM3B-208ENST00000512928 KRR1Q13601 381 aaKnown RBP5.6□□□□□ -1.51
KDM3B-208ENST00000512928 FHL1Q13642 323 aa5.6□□□□□ -1.51
KDM3B-208ENST00000512928 DGCR6Q14129 220 aa5.6□□□□□ -1.51
KDM3B-208ENST00000512928 SEC23BQ15437 767 aa5.6□□□□□ -1.51
KDM3B-208ENST00000512928 TMEM249Q2WGJ8 235 aa5.6□□□□□ -1.51
KDM3B-208ENST00000512928 ANKDD1AQ495B1 522 aa5.6□□□□□ -1.51
KDM3B-208ENST00000512928 NRN1LQ496H8 165 aa5.6□□□□□ -1.51
KDM3B-208ENST00000512928 SPATA46Q5T0L3 261 aa5.6□□□□□ -1.51
KDM3B-208ENST00000512928 C10orf128Q5T292 105 aa5.6□□□□□ -1.51
KDM3B-208ENST00000512928 OTPQ5XKR4 325 aa5.6□□□□□ -1.51
KDM3B-208ENST00000512928 DNM1P46Q6ZS02 220 aa5.6□□□□□ -1.51
KDM3B-208ENST00000512928 CCDC121Q6ZUS5 278 aa5.6□□□□□ -1.51
KDM3B-208ENST00000512928 TMPRSS11FQ6ZWK6 438 aa5.6□□□□□ -1.51
KDM3B-208ENST00000512928 LRP11Q86VZ4 500 aa5.6□□□□□ -1.51
KDM3B-208ENST00000512928 DHFR2Q86XF0 187 aa5.6□□□□□ -1.51
KDM3B-208ENST00000512928 ALDH16A1Q8IZ83 802 aa5.6□□□□□ -1.51
KDM3B-208ENST00000512928 PAQR4Q8N4S7 273 aaPredicted RBP5.6□□□□□ -1.51
KDM3B-208ENST00000512928 ARIH2OSQ8N7S6 290 aa5.6□□□□□ -1.51
KDM3B-208ENST00000512928 LRRC75AQ8NAA5 344 aa5.6□□□□□ -1.51
KDM3B-208ENST00000512928 OR10H5Q8NGA6 315 aa5.6□□□□□ -1.51
KDM3B-208ENST00000512928 OR1J1Q8NGS3 322 aa5.6□□□□□ -1.51
KDM3B-208ENST00000512928 AKR7LQ8NHP1 331 aa5.6□□□□□ -1.51
KDM3B-208ENST00000512928 ZNF519Q8TB69 540 aa5.6□□□□□ -1.51
KDM3B-208ENST00000512928 FNDC8Q8TC99 324 aa5.6□□□□□ -1.51
KDM3B-208ENST00000512928 SNX33Q8WV41 574 aa5.6□□□□□ -1.51
KDM3B-208ENST00000512928 NEU4Q8WWR8 484 aaPredicted RBP5.6□□□□□ -1.51
KDM3B-208ENST00000512928 C11orf40Q8WZ69 217 aa5.6□□□□□ -1.51
KDM3B-208ENST00000512928 SLCO4A1Q96BD0 722 aa5.6□□□□□ -1.51
KDM3B-208ENST00000512928 RASD2Q96D21 266 aa5.6□□□□□ -1.51
KDM3B-208ENST00000512928 Q96M85 177 aa5.6□□□□□ -1.51
KDM3B-208ENST00000512928 ZNF75AQ96N20 296 aa5.6□□□□□ -1.51
KDM3B-208ENST00000512928 SEPHS2Q99611 448 aa5.6□□□□□ -1.51
KDM3B-208ENST00000512928 DOK1Q99704 481 aa5.6□□□□□ -1.51
KDM3B-208ENST00000512928 THTPAQ9BU02 230 aa5.6□□□□□ -1.51
KDM3B-208ENST00000512928 BPESC1Q9GZL8 116 aa5.6□□□□□ -1.51
KDM3B-208ENST00000512928 CHODLQ9H9P2 273 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms