RNA–Protein interactions for RNA: ENST00000512632.5

LIMCH1-215, Transcript of LIM and calponin homology domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMCH1, Length 4,792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-215ENST00000512632 OR8B4Q96RC9 309 aa8.35□□□□□ -1.07
LIMCH1-215ENST00000512632 B3GNT4Q9C0J1 378 aa8.35□□□□□ -1.07
LIMCH1-215ENST00000512632 WDR13Q9H1Z4 485 aa8.35□□□□□ -1.07
LIMCH1-215ENST00000512632 SOHLH2Q9NX45 425 aa8.35□□□□□ -1.07
LIMCH1-215ENST00000512632 DHDHQ9UQ10 334 aa8.35□□□□□ -1.07
LIMCH1-215ENST00000512632 KIR2DS5A0A0G2JLQ3 304 aa8.35□□□□□ -1.07
LIMCH1-215ENST00000512632 A0A0G2JNG1 304 aa8.35□□□□□ -1.07
LIMCH1-215ENST00000512632 A0A1B0GTQ1 180 aa8.35□□□□□ -1.07
LIMCH1-215ENST00000512632 TCRBV21S2A2A0A5A6 115 aa8.35□□□□□ -1.07
LIMCH1-215ENST00000512632 KIR2DS3K7RE56 304 aa8.35□□□□□ -1.07
LIMCH1-215ENST00000512632 SRPX2O60687 465 aaPredicted RBP8.35□□□□□ -1.07
LIMCH1-215ENST00000512632 ZNF432O94892 652 aa8.35□□□□□ -1.07
LIMCH1-215ENST00000512632 EIF2B5Q13144 721 aaKnown RBP8.35□□□□□ -1.07
LIMCH1-215ENST00000512632 ZNF273Q14593 569 aa8.35□□□□□ -1.07
LIMCH1-215ENST00000512632 KIR2DS5Q14953 304 aa8.35□□□□□ -1.07
LIMCH1-215ENST00000512632 NR0B2Q15466 257 aa8.35□□□□□ -1.07
LIMCH1-215ENST00000512632 ACKR1Q16570 336 aa8.35□□□□□ -1.07
LIMCH1-215ENST00000512632 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.35□□□□□ -1.07
LIMCH1-215ENST00000512632 PRAMEF17Q5VTA0 474 aa8.35□□□□□ -1.07
LIMCH1-215ENST00000512632 ARHGEF39Q8N4T4 335 aa8.35□□□□□ -1.07
LIMCH1-215ENST00000512632 ASB12Q8WXK4 309 aa8.35□□□□□ -1.07
LIMCH1-215ENST00000512632 TSLPQ969D9 159 aa8.35□□□□□ -1.07
LIMCH1-215ENST00000512632 SLC25A44Q96H78 314 aaPredicted RBP8.35□□□□□ -1.07
LIMCH1-215ENST00000512632 PRODH2Q9UF12 536 aa8.35□□□□□ -1.07
LIMCH1-215ENST00000512632 FREM3P0C091 2139 aa8.35□□□□□ -1.07
LIMCH1-215ENST00000512632 TMEM235A6NFC5 223 aa8.34□□□□□ -1.07
LIMCH1-215ENST00000512632 FAM25EA8MYX2 175 aa8.34□□□□□ -1.07
LIMCH1-215ENST00000512632 D6RAR5 112 aa8.34□□□□□ -1.07
LIMCH1-215ENST00000512632 EGR3Q06889 387 aa8.34□□□□□ -1.07
LIMCH1-215ENST00000512632 C9orf50Q5SZB4 431 aa8.34□□□□□ -1.07
LIMCH1-215ENST00000512632 OR1J2Q8NGS2 313 aa8.34□□□□□ -1.07
LIMCH1-215ENST00000512632 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.34□□□□□ -1.07
LIMCH1-215ENST00000512632 DPYSL5Q9BPU6 564 aa8.34□□□□□ -1.07
LIMCH1-215ENST00000512632 PDCD10Q9BUL8 212 aa8.34□□□□□ -1.07
LIMCH1-215ENST00000512632 NOP16Q9Y3C1 178 aaKnown RBP8.34□□□□□ -1.07
LIMCH1-215ENST00000512632 MYO15AQ9UKN7 3530 aa8.34□□□□□ -1.07
LIMCH1-215ENST00000512632 TRAV14DV4A0A0A6YYC5 116 aa8.34□□□□□ -1.07
LIMCH1-215ENST00000512632 ICOSLGO75144 302 aa8.34□□□□□ -1.07
LIMCH1-215ENST00000512632 SEMA4FO95754 770 aa8.34□□□□□ -1.07
LIMCH1-215ENST00000512632 FGF2P09038 288 aa8.34□□□□□ -1.07
LIMCH1-215ENST00000512632 THEGLP0DJG4 465 aa8.34□□□□□ -1.07
LIMCH1-215ENST00000512632 CTLA4P16410 223 aa8.34□□□□□ -1.07
LIMCH1-215ENST00000512632 YPEL5P62699 121 aa8.34□□□□□ -1.07
LIMCH1-215ENST00000512632 ADAM8P78325 824 aa8.34□□□□□ -1.07
LIMCH1-215ENST00000512632 MOGAT2Q3SYC2 334 aa8.34□□□□□ -1.07
LIMCH1-215ENST00000512632 STEAP2Q8NFT2 490 aa8.34□□□□□ -1.07
LIMCH1-215ENST00000512632 OR10K1Q8NGX5 313 aa8.34□□□□□ -1.07
LIMCH1-215ENST00000512632 GPX8Q8TED1 209 aa8.34□□□□□ -1.07
LIMCH1-215ENST00000512632 MICU1Q9BPX6 476 aa8.34□□□□□ -1.07
LIMCH1-215ENST00000512632 MRPS18BQ9Y676 258 aaKnown RBP8.34□□□□□ -1.07
LIMCH1-215ENST00000512632 PRUNE2Q8WUY3 3088 aa8.34□□□□□ -1.07
LIMCH1-215ENST00000512632 LMX1BO60663 402 aa8.34□□□□□ -1.07
LIMCH1-215ENST00000512632 TXNDC12O95881 172 aa8.34□□□□□ -1.07
LIMCH1-215ENST00000512632 BAMBIQ13145 260 aa8.34□□□□□ -1.07
LIMCH1-215ENST00000512632 LY6G6FQ5SQ64 297 aa8.34□□□□□ -1.07
LIMCH1-215ENST00000512632 FNDC7Q5VTL7 733 aa8.34□□□□□ -1.07
LIMCH1-215ENST00000512632 TMEM225Q6GV28 225 aa8.34□□□□□ -1.07
LIMCH1-215ENST00000512632 TMEM151BQ8IW70 566 aa8.34□□□□□ -1.07
LIMCH1-215ENST00000512632 BPIFB2Q8N4F0 458 aa8.34□□□□□ -1.07
LIMCH1-215ENST00000512632 SLC25A28Q96A46 364 aa8.34□□□□□ -1.07
LIMCH1-215ENST00000512632 ZNF75AQ96N20 296 aa8.34□□□□□ -1.07
LIMCH1-215ENST00000512632 OR11A1Q9GZK7 315 aa8.34□□□□□ -1.07
LIMCH1-215ENST00000512632 PLEKHA6Q9Y2H5 1048 aa8.34□□□□□ -1.07
LIMCH1-215ENST00000512632 ASXL3Q9C0F0 2248 aa8.34□□□□□ -1.07
LIMCH1-215ENST00000512632 KCNAB3O43448 404 aa8.34□□□□□ -1.07
LIMCH1-215ENST00000512632 NAGAP17050 411 aa8.34□□□□□ -1.07
LIMCH1-215ENST00000512632 HTR2CP28335 458 aa8.34□□□□□ -1.07
LIMCH1-215ENST00000512632 STARP49675 285 aa8.34□□□□□ -1.07
LIMCH1-215ENST00000512632 INSM1Q01101 510 aaPredicted RBP8.34□□□□□ -1.07
LIMCH1-215ENST00000512632 ZNF117Q03924 483 aa8.34□□□□□ -1.07
LIMCH1-215ENST00000512632 UBXN2BQ14CS0 331 aa8.34□□□□□ -1.07
LIMCH1-215ENST00000512632 FAM122CQ6P4D5 195 aa8.34□□□□□ -1.07
LIMCH1-215ENST00000512632 NAXDQ8IW45 347 aa8.34□□□□□ -1.07
LIMCH1-215ENST00000512632 ZNF679Q8IYX0 411 aa8.34□□□□□ -1.07
LIMCH1-215ENST00000512632 ACBD4Q8NC06 268 aa8.34□□□□□ -1.07
LIMCH1-215ENST00000512632 MRPL22Q9NWU5 206 aaKnown RBP8.34□□□□□ -1.07
LIMCH1-215ENST00000512632 SLC25A12O75746 678 aa8.33□□□□□ -1.08
LIMCH1-215ENST00000512632 CYB5AP00167 134 aa8.33□□□□□ -1.08
LIMCH1-215ENST00000512632 CD2P06729 351 aa8.33□□□□□ -1.08
LIMCH1-215ENST00000512632 IFI6P09912 130 aa8.33□□□□□ -1.08
LIMCH1-215ENST00000512632 ICAM2P13598 275 aa8.33□□□□□ -1.08
LIMCH1-215ENST00000512632 CTRB1P17538 263 aa8.33□□□□□ -1.08
LIMCH1-215ENST00000512632 LUMP51884 338 aaPredicted RBP8.33□□□□□ -1.08
LIMCH1-215ENST00000512632 GFERP55789 205 aa8.33□□□□□ -1.08
LIMCH1-215ENST00000512632 CTRB2Q6GPI1 263 aa8.33□□□□□ -1.08
LIMCH1-215ENST00000512632 OVCH2Q7RTZ1 564 aa8.33□□□□□ -1.08
LIMCH1-215ENST00000512632 PTPMT1Q8WUK0 201 aaPredicted RBP8.33□□□□□ -1.08
LIMCH1-215ENST00000512632 ASB5Q8WWX0 329 aa8.33□□□□□ -1.08
LIMCH1-215ENST00000512632 ST8SIA2Q92186 375 aa8.33□□□□□ -1.08
LIMCH1-215ENST00000512632 FAM46BQ96A09 425 aa8.33□□□□□ -1.08
LIMCH1-215ENST00000512632 CMBLQ96DG6 245 aa8.33□□□□□ -1.08
LIMCH1-215ENST00000512632 ABHD6Q9BV23 337 aa8.33□□□□□ -1.08
LIMCH1-215ENST00000512632 ZNF471Q9BX82 626 aaPredicted RBP8.33□□□□□ -1.08
LIMCH1-215ENST00000512632 POTEKPQ9BYX7 375 aa8.33□□□□□ -1.08
LIMCH1-215ENST00000512632 TAS2R3Q9NYW6 316 aa8.33□□□□□ -1.08
LIMCH1-215ENST00000512632 MRTO4Q9UKD2 239 aaKnown RBP8.33□□□□□ -1.08
LIMCH1-215ENST00000512632 YBX2Q9Y2T7 364 aaKnown RBP8.33□□□□□ -1.08
LIMCH1-215ENST00000512632 EMC9Q9Y3B6 208 aa8.33□□□□□ -1.08
LIMCH1-215ENST00000512632 FAM221BA6H8Z2 402 aa8.33□□□□□ -1.08
LIMCH1-215ENST00000512632 OR5H14A6NHG9 310 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms