RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 ZBTB18Q99592 522 aa15.89■□□□□ 0.13
HMGCS1-206ENST00000511774 MRPL13Q9BYD1 178 aaKnown RBP15.89■□□□□ 0.13
HMGCS1-206ENST00000511774 TMEM27Q9HBJ8 222 aa15.89■□□□□ 0.13
HMGCS1-206ENST00000511774 CYSLTR2Q9NS75 346 aa15.89■□□□□ 0.13
HMGCS1-206ENST00000511774 THUMPD1Q9NXG2 353 aaKnown RBP15.89■□□□□ 0.13
HMGCS1-206ENST00000511774 RNF114Q9Y508 228 aa15.89■□□□□ 0.13
HMGCS1-206ENST00000511774 COL7A1Q02388 2944 aa15.89■□□□□ 0.13
HMGCS1-206ENST00000511774 H0YL77 283 aa15.88■□□□□ 0.13
HMGCS1-206ENST00000511774 RNF13O43567 381 aa15.88■□□□□ 0.13
HMGCS1-206ENST00000511774 CLPXO76031 633 aa15.88■□□□□ 0.13
HMGCS1-206ENST00000511774 SLC2A10O95528 541 aa15.88■□□□□ 0.13
HMGCS1-206ENST00000511774 CH25HO95992 272 aa15.88■□□□□ 0.13
HMGCS1-206ENST00000511774 MT-ATP6P00846 226 aa15.88■□□□□ 0.13
HMGCS1-206ENST00000511774 IL6P05231 212 aa15.88■□□□□ 0.13
HMGCS1-206ENST00000511774 CRYBA1P05813 215 aa15.88■□□□□ 0.13
HMGCS1-206ENST00000511774 MELTFP08582 738 aa15.88■□□□□ 0.13
HMGCS1-206ENST00000511774 BGNP21810 368 aa15.88■□□□□ 0.13
HMGCS1-206ENST00000511774 PSG4Q00888 419 aa15.88■□□□□ 0.13
HMGCS1-206ENST00000511774 HLXQ14774 488 aaPredicted RBP15.88■□□□□ 0.13
HMGCS1-206ENST00000511774 MTX3Q5HYI7 312 aa15.88■□□□□ 0.13
HMGCS1-206ENST00000511774 CEP85LQ5SZL2 805 aa15.88■□□□□ 0.13
HMGCS1-206ENST00000511774 TSPYL5Q86VY4 417 aaPredicted RBP15.88■□□□□ 0.13
HMGCS1-206ENST00000511774 ITLN1Q8WWA0 313 aa15.88■□□□□ 0.13
HMGCS1-206ENST00000511774 RAB40AQ8WXH6 277 aa15.88■□□□□ 0.13
HMGCS1-206ENST00000511774 SAMD8Q96LT4 415 aa15.88■□□□□ 0.13
HMGCS1-206ENST00000511774 SEPHS2Q99611 448 aa15.88■□□□□ 0.13
HMGCS1-206ENST00000511774 SSBP3Q9BWW4 388 aaPredicted RBP15.88■□□□□ 0.13
HMGCS1-206ENST00000511774 WNT5BQ9H1J7 359 aa15.88■□□□□ 0.13
HMGCS1-206ENST00000511774 IL20RAQ9UHF4 553 aa15.88■□□□□ 0.13
HMGCS1-206ENST00000511774 LRCH1Q9Y2L9 728 aa15.88■□□□□ 0.13
HMGCS1-206ENST00000511774 CLIC1O00299 241 aa15.87■□□□□ 0.13
HMGCS1-206ENST00000511774 SLC22A3O75751 556 aa15.87■□□□□ 0.13
HMGCS1-206ENST00000511774 OR6A2O95222 327 aa15.87■□□□□ 0.13
HMGCS1-206ENST00000511774 LIPAP38571 399 aa15.87■□□□□ 0.13
HMGCS1-206ENST00000511774 MDH2P40926 338 aaKnown RBP15.87■□□□□ 0.13
HMGCS1-206ENST00000511774 ZNF133P52736 654 aaPredicted RBP15.87■□□□□ 0.13
HMGCS1-206ENST00000511774 CLRN1P58418 232 aa15.87■□□□□ 0.13
HMGCS1-206ENST00000511774 LRRN1Q6UXK5 716 aa15.87■□□□□ 0.13
HMGCS1-206ENST00000511774 MSRB3Q8IXL7 192 aa15.87■□□□□ 0.13
HMGCS1-206ENST00000511774 HIPK4Q8NE63 616 aa15.87■□□□□ 0.13
HMGCS1-206ENST00000511774 NOXO1Q8NFA2 376 aa15.87■□□□□ 0.13
HMGCS1-206ENST00000511774 GTF2H4Q92759 462 aa15.87■□□□□ 0.13
HMGCS1-206ENST00000511774 ITCHQ96J02 903 aa15.87■□□□□ 0.13
HMGCS1-206ENST00000511774 SLC25A37Q9NYZ2 338 aa15.87■□□□□ 0.13
HMGCS1-206ENST00000511774 SELENONQ9NZV5 590 aa15.87■□□□□ 0.13
HMGCS1-206ENST00000511774 EIF3KQ9UBQ5 218 aaKnown RBP15.87■□□□□ 0.13
HMGCS1-206ENST00000511774 TENM3Q9P273 2699 aa15.86■□□□□ 0.13
HMGCS1-206ENST00000511774 C5orf58C9J3I9 102 aa15.86■□□□□ 0.13
HMGCS1-206ENST00000511774 TMEM178BH3BS89 294 aa15.86■□□□□ 0.13
HMGCS1-206ENST00000511774 IGHG1P01857 330 aa15.86■□□□□ 0.13
HMGCS1-206ENST00000511774 GDI2P50395 445 aaKnown RBP15.86■□□□□ 0.13
HMGCS1-206ENST00000511774 NCALDP61601 193 aa15.86■□□□□ 0.13
HMGCS1-206ENST00000511774 ERVK-25P63136 954 aa15.86■□□□□ 0.13
HMGCS1-206ENST00000511774 NPTX1Q15818 432 aa15.86■□□□□ 0.13
HMGCS1-206ENST00000511774 C6orf10Q5SRN2 563 aa15.86■□□□□ 0.13
HMGCS1-206ENST00000511774 C10orf128Q5T292 105 aa15.86■□□□□ 0.13
HMGCS1-206ENST00000511774 KLBQ86Z14 1044 aa15.86■□□□□ 0.13
HMGCS1-206ENST00000511774 EIF1ADQ8N9N8 165 aaKnown RBP15.86■□□□□ 0.13
HMGCS1-206ENST00000511774 OR2Z1Q8NG97 314 aa15.86■□□□□ 0.13
HMGCS1-206ENST00000511774 NMD3Q96D46 503 aaKnown RBP15.86■□□□□ 0.13
HMGCS1-206ENST00000511774 SIAEQ9HAT2 523 aa15.86■□□□□ 0.13
HMGCS1-206ENST00000511774 TMEM165Q9HC07 324 aa15.86■□□□□ 0.13
HMGCS1-206ENST00000511774 ASH2LQ9UBL3 628 aa15.86■□□□□ 0.13
HMGCS1-206ENST00000511774 CGGBP1Q9UFW8 167 aaPredicted RBP15.86■□□□□ 0.13
HMGCS1-206ENST00000511774 PPP1R3CQ9UQK1 317 aa15.86■□□□□ 0.13
HMGCS1-206ENST00000511774 KIR2DS1A0A191URI9 304 aa15.85■□□□□ 0.13
HMGCS1-206ENST00000511774 M0R3H8 397 aa15.85■□□□□ 0.13
HMGCS1-206ENST00000511774 TIMM8AO60220 97 aaPredicted RBP15.85■□□□□ 0.13
HMGCS1-206ENST00000511774 ICMTO60725 284 aa15.85■□□□□ 0.13
HMGCS1-206ENST00000511774 TRMUO75648 421 aaKnown RBP15.85■□□□□ 0.13
HMGCS1-206ENST00000511774 ASAH2BP0C7U1 165 aa15.85■□□□□ 0.13
HMGCS1-206ENST00000511774 ERFP50548 548 aa15.85■□□□□ 0.13
HMGCS1-206ENST00000511774 MMP16P51512 607 aa15.85■□□□□ 0.13
HMGCS1-206ENST00000511774 ZNF84P51523 738 aa15.85■□□□□ 0.13
HMGCS1-206ENST00000511774 FGF12P61328 243 aa15.85■□□□□ 0.13
HMGCS1-206ENST00000511774 MRPS34P82930 218 aaKnown RBP15.85■□□□□ 0.13
HMGCS1-206ENST00000511774 FMODQ06828 376 aa15.85■□□□□ 0.13
HMGCS1-206ENST00000511774 FADDQ13158 208 aa15.85■□□□□ 0.13
HMGCS1-206ENST00000511774 MPP2Q14168 576 aa15.85■□□□□ 0.13
HMGCS1-206ENST00000511774 SWT1Q5T5J6 900 aaKnown RBP15.85■□□□□ 0.13
HMGCS1-206ENST00000511774 SLC2A7Q6PXP3 512 aa15.85■□□□□ 0.13
HMGCS1-206ENST00000511774 BTNL3Q6UXE8 466 aa15.85■□□□□ 0.13
HMGCS1-206ENST00000511774 ASB10Q8WXI3 467 aa15.85■□□□□ 0.13
HMGCS1-206ENST00000511774 ANP32BQ92688 251 aaKnown RBP15.85■□□□□ 0.13
HMGCS1-206ENST00000511774 TCF7L1Q9HCS4 588 aa15.85■□□□□ 0.13
HMGCS1-206ENST00000511774 CCNB1IP1Q9NPC3 277 aa15.85■□□□□ 0.13
HMGCS1-206ENST00000511774 H3BSA7 217 aa15.84■□□□□ 0.13
HMGCS1-206ENST00000511774 KPNA4O00629 521 aaPredicted RBP15.84■□□□□ 0.13
HMGCS1-206ENST00000511774 BIRC5O15392 142 aa15.84■□□□□ 0.13
HMGCS1-206ENST00000511774 F13BP05160 661 aa15.84■□□□□ 0.13
HMGCS1-206ENST00000511774 BST1Q10588 318 aa15.84■□□□□ 0.13
HMGCS1-206ENST00000511774 KPRPQ5T749 579 aaPredicted RBP15.84■□□□□ 0.13
HMGCS1-206ENST00000511774 HHATQ5VTY9 493 aa15.84■□□□□ 0.13
HMGCS1-206ENST00000511774 REEP3Q6NUK4 255 aa15.84■□□□□ 0.13
HMGCS1-206ENST00000511774 MSANTD1Q6ZTZ1 278 aa15.84■□□□□ 0.13
HMGCS1-206ENST00000511774 FITM2Q8N6M3 262 aa15.84■□□□□ 0.13
HMGCS1-206ENST00000511774 ZNF420Q8TAQ5 688 aaPredicted RBP15.84■□□□□ 0.13
HMGCS1-206ENST00000511774 ZNF607Q96SK3 696 aa15.84■□□□□ 0.13
HMGCS1-206ENST00000511774 MCHR1Q99705 422 aa15.84■□□□□ 0.13
HMGCS1-206ENST00000511774 CDADC1Q9BWV3 514 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms