RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 LRP12Q9Y561 859 aa16.13■□□□□ 0.17
CCHCR1-228ENST00000509552 CACNA1CQ13936 2221 aa16.12■□□□□ 0.17
CCHCR1-228ENST00000509552 RLN1P04808 185 aa16.12■□□□□ 0.17
CCHCR1-228ENST00000509552 CSNK1EP49674 416 aaKnown RBP16.12■□□□□ 0.17
CCHCR1-228ENST00000509552 MFGE8Q08431 387 aaPredicted RBP16.12■□□□□ 0.17
CCHCR1-228ENST00000509552 POU4F3Q15319 338 aa16.12■□□□□ 0.17
CCHCR1-228ENST00000509552 TOMM20Q15388 145 aa16.12■□□□□ 0.17
CCHCR1-228ENST00000509552 CATSPERDQ86XM0 798 aa16.12■□□□□ 0.17
CCHCR1-228ENST00000509552 PLPP7Q8NBV4 271 aa16.12■□□□□ 0.17
CCHCR1-228ENST00000509552 ASB5Q8WWX0 329 aa16.12■□□□□ 0.17
CCHCR1-228ENST00000509552 RELTQ969Z4 430 aa16.12■□□□□ 0.17
CCHCR1-228ENST00000509552 PPP1R14AQ96A00 147 aa16.12■□□□□ 0.17
CCHCR1-228ENST00000509552 COA3Q9Y2R0 106 aaPredicted RBP16.12■□□□□ 0.17
CCHCR1-228ENST00000509552 AUP1Q9Y679 476 aa16.12■□□□□ 0.17
CCHCR1-228ENST00000509552 CIB4A0PJX0 185 aa16.12■□□□□ 0.17
CCHCR1-228ENST00000509552 A6NIZ1 184 aa16.12■□□□□ 0.17
CCHCR1-228ENST00000509552 OR2A4O95047 310 aa16.12■□□□□ 0.17
CCHCR1-228ENST00000509552 CRYZL1O95825 349 aa16.12■□□□□ 0.17
CCHCR1-228ENST00000509552 ZNF823P16415 610 aa16.12■□□□□ 0.17
CCHCR1-228ENST00000509552 CSF2RBP32927 897 aa16.12■□□□□ 0.17
CCHCR1-228ENST00000509552 RAP1BP61224 184 aa16.12■□□□□ 0.17
CCHCR1-228ENST00000509552 RAP1AP62834 184 aa16.12■□□□□ 0.17
CCHCR1-228ENST00000509552 DHODHQ02127 395 aa16.12■□□□□ 0.17
CCHCR1-228ENST00000509552 SSBP1Q04837 148 aaKnown RBP16.12■□□□□ 0.17
CCHCR1-228ENST00000509552 UBXN2BQ14CS0 331 aa16.12■□□□□ 0.17
CCHCR1-228ENST00000509552 DNM1P34Q6PK57 102 aa16.12■□□□□ 0.17
CCHCR1-228ENST00000509552 PLPP5Q8NEB5 264 aa16.12■□□□□ 0.17
CCHCR1-228ENST00000509552 OR1J4Q8NGS1 313 aa16.12■□□□□ 0.17
CCHCR1-228ENST00000509552 OR6N1Q8NGY5 312 aa16.12■□□□□ 0.17
CCHCR1-228ENST00000509552 MARVELD3Q96A59 401 aa16.12■□□□□ 0.17
CCHCR1-228ENST00000509552 OR2A7Q96R45 310 aa16.12■□□□□ 0.17
CCHCR1-228ENST00000509552 FGF21Q9NSA1 209 aa16.12■□□□□ 0.17
CCHCR1-228ENST00000509552 GLTPQ9NZD2 209 aa16.12■□□□□ 0.17
CCHCR1-228ENST00000509552 RP1P56715 2156 aa16.11■□□□□ 0.17
CCHCR1-228ENST00000509552 TMEM272A0A1B0GTI8 110 aa16.11■□□□□ 0.17
CCHCR1-228ENST00000509552 KDM4BO94953 1096 aa16.11■□□□□ 0.17
CCHCR1-228ENST00000509552 GLB1P16278 677 aa16.11■□□□□ 0.17
CCHCR1-228ENST00000509552 DLX5P56178 289 aa16.11■□□□□ 0.17
CCHCR1-228ENST00000509552 RNF4P78317 190 aa16.11■□□□□ 0.17
CCHCR1-228ENST00000509552 GUCA2AQ02747 115 aa16.11■□□□□ 0.17
CCHCR1-228ENST00000509552 OPCMLQ14982 345 aa16.11■□□□□ 0.17
CCHCR1-228ENST00000509552 FAM166AQ6J272 317 aa16.11■□□□□ 0.17
CCHCR1-228ENST00000509552 FAM198BQ6UWH4 519 aa16.11■□□□□ 0.17
CCHCR1-228ENST00000509552 KMT5CQ86Y97 462 aa16.11■□□□□ 0.17
CCHCR1-228ENST00000509552 RBP7Q96R05 134 aa16.11■□□□□ 0.17
CCHCR1-228ENST00000509552 SLC7A5P2Q9GIP4 190 aa16.11■□□□□ 0.17
CCHCR1-228ENST00000509552 SEMA5BQ9P283 1151 aa16.11■□□□□ 0.17
CCHCR1-228ENST00000509552 CTSFQ9UBX1 484 aa16.11■□□□□ 0.17
CCHCR1-228ENST00000509552 TMA7Q9Y2S6 64 aaKnown RBP16.11■□□□□ 0.17
CCHCR1-228ENST00000509552 L7N2F9 121 aa16.11■□□□□ 0.17
CCHCR1-228ENST00000509552 HTR2CP28335 458 aa16.11■□□□□ 0.17
CCHCR1-228ENST00000509552 MAP2K6P52564 334 aa16.11■□□□□ 0.17
CCHCR1-228ENST00000509552 AP2S1P53680 142 aaPredicted RBP16.11■□□□□ 0.17
CCHCR1-228ENST00000509552 ACTBP60709 375 aa16.11■□□□□ 0.17
CCHCR1-228ENST00000509552 ACTG1P63261 375 aa16.11■□□□□ 0.17
CCHCR1-228ENST00000509552 SHISA6Q6ZSJ9 500 aa16.11■□□□□ 0.17
CCHCR1-228ENST00000509552 OR52B4Q8NGK2 314 aa16.11■□□□□ 0.17
CCHCR1-228ENST00000509552 OR6S1Q8NH40 331 aa16.11■□□□□ 0.17
CCHCR1-228ENST00000509552 ZNF501Q96CX3 271 aaPredicted RBP16.11■□□□□ 0.17
CCHCR1-228ENST00000509552 SLC25A44Q96H78 314 aaPredicted RBP16.11■□□□□ 0.17
CCHCR1-228ENST00000509552 PHF7Q9BWX1 381 aaPredicted RBP16.11■□□□□ 0.17
CCHCR1-228ENST00000509552 KCNK15Q9H427 330 aa16.11■□□□□ 0.17
CCHCR1-228ENST00000509552 CDCP1Q9H5V8 836 aa16.11■□□□□ 0.17
CCHCR1-228ENST00000509552 TAS2R4Q9NYW5 299 aa16.11■□□□□ 0.17
CCHCR1-228ENST00000509552 R4GMQ9 66 aa16.11■□□□□ 0.17
CCHCR1-228ENST00000509552 PLSCR5A0PG75 271 aa16.1■□□□□ 0.17
CCHCR1-228ENST00000509552 OR2M5A3KFT3 312 aa16.1■□□□□ 0.17
CCHCR1-228ENST00000509552 NPIPA5E9PKD4 350 aa16.1■□□□□ 0.17
CCHCR1-228ENST00000509552 VSIG10L2P0DP72 767 aa16.1■□□□□ 0.17
CCHCR1-228ENST00000509552 FSTP19883 344 aa16.1■□□□□ 0.17
CCHCR1-228ENST00000509552 NFYAP23511 347 aaPredicted RBP16.1■□□□□ 0.17
CCHCR1-228ENST00000509552 DNASE1L1P49184 302 aa16.1■□□□□ 0.17
CCHCR1-228ENST00000509552 MFSD13AQ14CX5 517 aa16.1■□□□□ 0.17
CCHCR1-228ENST00000509552 TOR2AQ5JU69 321 aa16.1■□□□□ 0.17
CCHCR1-228ENST00000509552 ASPHD2Q6ICH7 369 aa16.1■□□□□ 0.17
CCHCR1-228ENST00000509552 OR5M10Q6IEU7 315 aa16.1■□□□□ 0.17
CCHCR1-228ENST00000509552 SLC36A1Q7Z2H8 476 aa16.1■□□□□ 0.17
CCHCR1-228ENST00000509552 MDGA2Q7Z553 956 aa16.1■□□□□ 0.17
CCHCR1-228ENST00000509552 PRSS42Q7Z5A4 293 aa16.1■□□□□ 0.17
CCHCR1-228ENST00000509552 KDM8Q8N371 416 aa16.1■□□□□ 0.17
CCHCR1-228ENST00000509552 ST8SIA1Q92185 356 aa16.1■□□□□ 0.17
CCHCR1-228ENST00000509552 ELMOD3Q96FG2 381 aa16.1■□□□□ 0.17
CCHCR1-228ENST00000509552 TMPRSS13Q9BYE2 586 aa16.1■□□□□ 0.17
CCHCR1-228ENST00000509552 HHLA2Q9UM44 414 aa16.1■□□□□ 0.17
CCHCR1-228ENST00000509552 NPIPA1Q9UND3 350 aa16.1■□□□□ 0.17
CCHCR1-228ENST00000509552 EYSQ5T1H1 3165 aa16.1■□□□□ 0.17
CCHCR1-228ENST00000509552 MEGF11A6BM72 1044 aa16.1■□□□□ 0.17
CCHCR1-228ENST00000509552 MEIS3P1A6NDR6 274 aa16.1■□□□□ 0.17
CCHCR1-228ENST00000509552 FTCDNL1E5RQL4 147 aa16.1■□□□□ 0.17
CCHCR1-228ENST00000509552 MBTPS2O43462 519 aa16.1■□□□□ 0.17
CCHCR1-228ENST00000509552 HLA-DOBP13765 273 aa16.1■□□□□ 0.17
CCHCR1-228ENST00000509552 IGFBP4P22692 258 aa16.1■□□□□ 0.17
CCHCR1-228ENST00000509552 DAP3P51398 398 aaKnown RBP16.1■□□□□ 0.17
CCHCR1-228ENST00000509552 ARPC4P59998 168 aa16.1■□□□□ 0.17
CCHCR1-228ENST00000509552 BIVMQ86UB2 503 aa16.1■□□□□ 0.17
CCHCR1-228ENST00000509552 OR4D10Q8NGI6 311 aa16.1■□□□□ 0.17
CCHCR1-228ENST00000509552 OR51S1Q8NGJ8 323 aa16.1■□□□□ 0.17
CCHCR1-228ENST00000509552 OR13C3Q8NGS6 347 aa16.1■□□□□ 0.17
CCHCR1-228ENST00000509552 EMC9Q9Y3B6 208 aa16.1■□□□□ 0.17
CCHCR1-228ENST00000509552 RPS10-NUDT3A0A1W2PQS6 291 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms