RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 NUDT14O95848 222 aa9.93□□□□□ -0.82
SH3RF1-203ENST00000508685 RENP00797 406 aa9.93□□□□□ -0.82
SH3RF1-203ENST00000508685 SYPP08247 313 aa9.93□□□□□ -0.82
SH3RF1-203ENST00000508685 CSF1P09603 554 aa9.93□□□□□ -0.82
SH3RF1-203ENST00000508685 ITPKBP27987 946 aa9.93□□□□□ -0.82
SH3RF1-203ENST00000508685 TACR3P29371 465 aa9.93□□□□□ -0.82
SH3RF1-203ENST00000508685 SELENOPP49908 381 aa9.93□□□□□ -0.82
SH3RF1-203ENST00000508685 EMP2P54851 167 aa9.93□□□□□ -0.82
SH3RF1-203ENST00000508685 DLX5P56178 289 aa9.93□□□□□ -0.82
SH3RF1-203ENST00000508685 NANOS3P60323 173 aaKnown RBP9.93□□□□□ -0.82
SH3RF1-203ENST00000508685 PSMA6P60900 246 aaKnown RBP9.93□□□□□ -0.82
SH3RF1-203ENST00000508685 TOMM20Q15388 145 aa9.93□□□□□ -0.82
SH3RF1-203ENST00000508685 ZNF74Q16587 644 aa9.93□□□□□ -0.82
SH3RF1-203ENST00000508685 ALG10Q5BKT4 473 aa9.93□□□□□ -0.82
SH3RF1-203ENST00000508685 PAPD4Q6PIY7 484 aaKnown RBP9.93□□□□□ -0.82
SH3RF1-203ENST00000508685 FAM198BQ6UWH4 519 aa9.93□□□□□ -0.82
SH3RF1-203ENST00000508685 CDC20BQ86Y33 519 aa9.93□□□□□ -0.82
SH3RF1-203ENST00000508685 GLB1L2Q8IW92 636 aa9.93□□□□□ -0.82
SH3RF1-203ENST00000508685 IZUMO1Q8IYV9 350 aa9.93□□□□□ -0.82
SH3RF1-203ENST00000508685 BMPERQ8N8U9 685 aa9.93□□□□□ -0.82
SH3RF1-203ENST00000508685 LRRC75AQ8NAA5 344 aa9.93□□□□□ -0.82
SH3RF1-203ENST00000508685 DNAAF1Q8NEP3 725 aa9.93□□□□□ -0.82
SH3RF1-203ENST00000508685 METTL21AQ8WXB1 218 aa9.93□□□□□ -0.82
SH3RF1-203ENST00000508685 CRB3Q9BUF7 120 aa9.93□□□□□ -0.82
SH3RF1-203ENST00000508685 SEMA4CQ9C0C4 833 aa9.93□□□□□ -0.82
SH3RF1-203ENST00000508685 ARRDC1-AS1Q9H2J1 176 aa9.93□□□□□ -0.82
SH3RF1-203ENST00000508685 FAM186AA6NE01 2351 aa9.93□□□□□ -0.82
SH3RF1-203ENST00000508685 OTOGLQ3ZCN5 2332 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 PLSCR5A0PG75 271 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 ANXA2P2A6NMY6 339 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 TTLL8A6PVC2 850 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 I3L521 148 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 ZNF254O75437 659 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 SERPINI2O75830 405 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 HIST1H2ABP04908 130 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 ANXA2P07355 339 aaKnown RBP9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 NFYAP23511 347 aaPredicted RBP9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 MPLP40238 635 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 CDKN2AP42771 156 aaKnown RBP9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 PNLIPRP2P54317 469 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 FBXW4P57775 412 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 TAS2R20P59543 309 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 POU4F3Q15319 338 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 RBMS2Q15434 407 aaKnown RBP9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 AANATQ16613 207 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 LIPNQ5VXI9 398 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 OR5M10Q6IEU7 315 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 SLC25A25Q6KCM7 469 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 HIST3H2AQ7L7L0 130 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 FAM122BQ7Z309 247 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 LRRTM1Q86UE6 522 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 C10orf53Q8N6V4 93 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 GPR148Q8TDV2 347 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 THEM6Q8WUY1 208 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 ZNRF4Q8WWF5 429 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 HIST1H2ACQ93077 130 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 RELTQ969Z4 430 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 RASD2Q96D21 266 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 KTI12Q96EK9 354 aaPredicted RBP9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 LAT2Q9GZY6 243 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 WDR76Q9H967 626 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 GRHPRQ9UBQ7 328 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 STEAP1Q9UHE8 339 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 LAMP5Q9UJQ1 280 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 CDV3Q9UKY7 258 aaKnown RBP9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 SPEF1Q9Y4P9 236 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 TRBV5-7A0A0A0MS05 114 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 TRBV11-1A0A0K0K1C0 115 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 A0A1W2PPL8 197 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 A0A1W2PQD3 144 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 TMEM72A0PK05 275 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 C2orf72A6NCS6 295 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 TMEM200CA6NKL6 621 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 C4orf47A7E2U8 309 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 G3V3Q6 166 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 BLOC1S5-TXNDC5H3BN57 136 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 H7C417 338 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 L7N2F9 121 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 FADS1O60427 444 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 ADRB1P08588 477 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 ASAH2BP0C7U1 165 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 FGF5P12034 268 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 CDK2P24941 298 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 SLC6A8P48029 635 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 DUSP3P51452 185 aaPredicted RBP9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 CTXN1P60606 82 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 GMFBP60983 142 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 ZFP36L1Q07352 338 aaKnown RBP9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 IL11RAQ14626 422 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 B3GNTL1Q67FW5 361 aaPredicted RBP9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 FDX2Q6P4F2 183 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 C3P1Q6ZMU1 363 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 Q6ZTK2 550 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 RGP1Q92546 391 aaPredicted RBP9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 RNF166Q96A37 237 aaPredicted RBP9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 MS4A3Q96HJ5 214 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 Q96M85 177 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 SLC25A18Q9H1K4 315 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 MMP25Q9NPA2 562 aa9.92□□□□□ -0.82
SH3RF1-203ENST00000508685 FRRS1LQ9P0K9 344 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms