RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 INHBBP09529 407 aa6.37□□□□□ -1.39
CLCN3-206ENST00000507875 C8orf89P0DMQ9 161 aa6.37□□□□□ -1.39
CLCN3-206ENST00000507875 HNF1AP20823 631 aa6.37□□□□□ -1.39
CLCN3-206ENST00000507875 TACR3P29371 465 aa6.37□□□□□ -1.39
CLCN3-206ENST00000507875 CXCR4P61073 352 aa6.37□□□□□ -1.39
CLCN3-206ENST00000507875 ACSM1Q08AH1 577 aa6.37□□□□□ -1.39
CLCN3-206ENST00000507875 PWWP2BQ6NUJ5 590 aa6.37□□□□□ -1.39
CLCN3-206ENST00000507875 DHRS4L2Q6PKH6 230 aa6.37□□□□□ -1.39
CLCN3-206ENST00000507875 ZNF517Q6ZMY9 492 aaPredicted RBP6.37□□□□□ -1.39
CLCN3-206ENST00000507875 BPIFB6Q8NFQ5 453 aa6.37□□□□□ -1.39
CLCN3-206ENST00000507875 CNIH3Q8TBE1 160 aa6.37□□□□□ -1.39
CLCN3-206ENST00000507875 CCDC120Q96HB5 630 aa6.37□□□□□ -1.39
CLCN3-206ENST00000507875 APOL4Q9BPW4 351 aa6.37□□□□□ -1.39
CLCN3-206ENST00000507875 ALKBH7Q9BT30 221 aaPredicted RBP6.37□□□□□ -1.39
CLCN3-206ENST00000507875 HOXD1Q9GZZ0 328 aa6.37□□□□□ -1.39
CLCN3-206ENST00000507875 LHPPQ9H008 270 aa6.37□□□□□ -1.39
CLCN3-206ENST00000507875 GAL3ST2Q9H3Q3 398 aa6.37□□□□□ -1.39
CLCN3-206ENST00000507875 MTHFD2LQ9H903 347 aaPredicted RBP6.37□□□□□ -1.39
CLCN3-206ENST00000507875 MED20Q9H944 212 aa6.37□□□□□ -1.39
CLCN3-206ENST00000507875 TMEM184BQ9Y519 407 aaPredicted RBP6.37□□□□□ -1.39
CLCN3-206ENST00000507875 GMPPBQ9Y5P6 360 aa6.37□□□□□ -1.39
CLCN3-206ENST00000507875 CCDC88CQ9P219 2028 aa6.37□□□□□ -1.39
CLCN3-206ENST00000507875 CABIN1Q9Y6J0 2220 aa6.36□□□□□ -1.39
CLCN3-206ENST00000507875 FER1L5A0AVI2 2057 aa6.36□□□□□ -1.39
CLCN3-206ENST00000507875 OR6C68A6NDL8 312 aa6.36□□□□□ -1.39
CLCN3-206ENST00000507875 ZNF98A6NK75 572 aa6.36□□□□□ -1.39
CLCN3-206ENST00000507875 TNFRSF11BO00300 401 aa6.36□□□□□ -1.39
CLCN3-206ENST00000507875 TRIAP1O43715 76 aa6.36□□□□□ -1.39
CLCN3-206ENST00000507875 SLC25A12O75746 678 aa6.36□□□□□ -1.39
CLCN3-206ENST00000507875 RFPL3SP0C7P2 107 aa6.36□□□□□ -1.39
CLCN3-206ENST00000507875 SPINK2P20155 84 aa6.36□□□□□ -1.39
CLCN3-206ENST00000507875 S1PR1P21453 382 aa6.36□□□□□ -1.39
CLCN3-206ENST00000507875 CDAP32320 146 aa6.36□□□□□ -1.39
CLCN3-206ENST00000507875 PDX1P52945 283 aa6.36□□□□□ -1.39
CLCN3-206ENST00000507875 TMBIM6P55061 237 aa6.36□□□□□ -1.39
CLCN3-206ENST00000507875 SMIM11AP58511 58 aa6.36□□□□□ -1.39
CLCN3-206ENST00000507875 HPCAP84074 193 aa6.36□□□□□ -1.39
CLCN3-206ENST00000507875 EIPR1Q53HC9 387 aa6.36□□□□□ -1.39
CLCN3-206ENST00000507875 SPATA46Q5T0L3 261 aa6.36□□□□□ -1.39
CLCN3-206ENST00000507875 TMEM205Q6UW68 189 aa6.36□□□□□ -1.39
CLCN3-206ENST00000507875 C16orf62Q7Z3J2 963 aa6.36□□□□□ -1.39
CLCN3-206ENST00000507875 TMPRSS12Q86WS5 348 aa6.36□□□□□ -1.39
CLCN3-206ENST00000507875 CYB561A3Q8NBI2 242 aa6.36□□□□□ -1.39
CLCN3-206ENST00000507875 SLC38A5Q8WUX1 472 aa6.36□□□□□ -1.39
CLCN3-206ENST00000507875 GEMIN6Q8WXD5 167 aaKnown RBP6.36□□□□□ -1.39
CLCN3-206ENST00000507875 GTF3AQ92664 365 aaKnown RBP6.36□□□□□ -1.39
CLCN3-206ENST00000507875 MARC2Q969Z3 335 aa6.36□□□□□ -1.39
CLCN3-206ENST00000507875 NODALQ96S42 347 aa6.36□□□□□ -1.39
CLCN3-206ENST00000507875 NAA50Q9GZZ1 169 aaKnown RBP6.36□□□□□ -1.39
CLCN3-206ENST00000507875 PAK1IP1Q9NWT1 392 aaPredicted RBP6.36□□□□□ -1.39
CLCN3-206ENST00000507875 OCIAD1Q9NX40 245 aa6.36□□□□□ -1.39
CLCN3-206ENST00000507875 PTTG3PQ9NZH4 202 aa6.36□□□□□ -1.39
CLCN3-206ENST00000507875 KLK13Q9UKR3 277 aa6.36□□□□□ -1.39
CLCN3-206ENST00000507875 PLEKHA6Q9Y2H5 1048 aa6.36□□□□□ -1.39
CLCN3-206ENST00000507875 LOXL2Q9Y4K0 774 aa6.36□□□□□ -1.39
CLCN3-206ENST00000507875 GOLGA4Q13439 2230 aaKnown RBP6.36□□□□□ -1.39
CLCN3-206ENST00000507875 ASXL3Q9C0F0 2248 aa6.36□□□□□ -1.39
CLCN3-206ENST00000507875 SCN2AQ99250 2005 aa6.36□□□□□ -1.39
CLCN3-206ENST00000507875 E9PQ18 207 aa6.36□□□□□ -1.39
CLCN3-206ENST00000507875 SLC28A2O43868 658 aa6.36□□□□□ -1.39
CLCN3-206ENST00000507875 CYP7B1O75881 506 aa6.36□□□□□ -1.39
CLCN3-206ENST00000507875 DHFRP00374 187 aa6.36□□□□□ -1.39
CLCN3-206ENST00000507875 C1QTNF9P0C862 333 aa6.36□□□□□ -1.39
CLCN3-206ENST00000507875 OR12D1P0DN82 309 aa6.36□□□□□ -1.39
CLCN3-206ENST00000507875 TNFRSF1BP20333 461 aa6.36□□□□□ -1.39
CLCN3-206ENST00000507875 EPHA2P29317 976 aa6.36□□□□□ -1.39
CLCN3-206ENST00000507875 PPICP45877 212 aa6.36□□□□□ -1.39
CLCN3-206ENST00000507875 OR1D4P47884 311 aa6.36□□□□□ -1.39
CLCN3-206ENST00000507875 OR1E2P47887 323 aa6.36□□□□□ -1.39
CLCN3-206ENST00000507875 RPS7P62081 194 aaKnown RBP6.36□□□□□ -1.39
CLCN3-206ENST00000507875 DECR1Q16698 335 aa6.36□□□□□ -1.39
CLCN3-206ENST00000507875 YRDCQ86U90 279 aaKnown RBP6.36□□□□□ -1.39
CLCN3-206ENST00000507875 LINC00471Q8N535 108 aa6.36□□□□□ -1.39
CLCN3-206ENST00000507875 PAQR8Q8TEZ7 354 aa6.36□□□□□ -1.39
CLCN3-206ENST00000507875 MRGPRFQ96AM1 343 aa6.36□□□□□ -1.39
CLCN3-206ENST00000507875 TMEM19Q96HH6 336 aa6.36□□□□□ -1.39
CLCN3-206ENST00000507875 ZNF300Q96RE9 604 aaPredicted RBP6.36□□□□□ -1.39
CLCN3-206ENST00000507875 PITX2Q99697 317 aa6.36□□□□□ -1.39
CLCN3-206ENST00000507875 DCUN1D5Q9BTE7 237 aa6.36□□□□□ -1.39
CLCN3-206ENST00000507875 GABARAPL3Q9BY60 117 aa6.36□□□□□ -1.39
CLCN3-206ENST00000507875 SLCO5A1Q9H2Y9 848 aa6.36□□□□□ -1.39
CLCN3-206ENST00000507875 PIGMQ9H3S5 423 aa6.36□□□□□ -1.39
CLCN3-206ENST00000507875 SAV1Q9H4B6 383 aaPredicted RBP6.36□□□□□ -1.39
CLCN3-206ENST00000507875 DHCR7Q9UBM7 475 aaKnown RBP6.36□□□□□ -1.39
CLCN3-206ENST00000507875 COPS7AQ9UBW8 275 aa6.36□□□□□ -1.39
CLCN3-206ENST00000507875 TESMINQ9Y4I5 508 aa6.36□□□□□ -1.39
CLCN3-206ENST00000507875 HEMK1Q9Y5R4 338 aaPredicted RBP6.36□□□□□ -1.39
CLCN3-206ENST00000507875 PCNX2A6NKB5 2137 aa6.35□□□□□ -1.39
CLCN3-206ENST00000507875 EXPH5Q8NEV8 1989 aa6.35□□□□□ -1.39
CLCN3-206ENST00000507875 HSPB2A8KAH6 182 aa6.35□□□□□ -1.39
CLCN3-206ENST00000507875 XPNPEP2O43895 674 aa6.35□□□□□ -1.39
CLCN3-206ENST00000507875 ALOX12BO75342 701 aa6.35□□□□□ -1.39
CLCN3-206ENST00000507875 CSO75390 466 aaKnown RBP6.35□□□□□ -1.39
CLCN3-206ENST00000507875 STX11O75558 287 aa6.35□□□□□ -1.39
CLCN3-206ENST00000507875 TFP02787 698 aa6.35□□□□□ -1.39
CLCN3-206ENST00000507875 BCHEP06276 602 aa6.35□□□□□ -1.39
CLCN3-206ENST00000507875 DBIP07108 87 aaKnown RBP6.35□□□□□ -1.39
CLCN3-206ENST00000507875 OR4E1P0C645 316 aa6.35□□□□□ -1.39
CLCN3-206ENST00000507875 ACP2P11117 423 aa6.35□□□□□ -1.39
CLCN3-206ENST00000507875 NR2C1P13056 603 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms